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Taxonomy browser (Francisella noatunensis)

Francisella noatunensis

Taxonomy ID: 657445 (for references in articles please use NCBI:txid657445)
current name
Francisella noatunensis (Mikalsen et al. 2007) Ottem et al. 2009 in [Validation List No. 128 (2009), Ottem KF et al. (2009)]
homotypic synonym:
Francisella noatunensis (Mikalsen et al. 2007) Ottem et al. 2009 emend. Ramirez-Paredes et al. 2020, emended name in [Ramirez-Paredes JG et al. (2020)]
basionym:
Francisella philomiragia subsp. noatunensis Mikalsen et al. 2007 in [Mikalsen J et al. (2007)]
type strain of Francisella philomiragia subsp. noatunensis: BCCM/LMG:23800, NCIMB:14265, personal::2005/50/F292-6C, DSM:23596
NCBI BLAST name: g-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Francisella piscicida Ottem et al. 2008 in [Validation List No. 119 (2008)]
type strain of Francisella piscicida: DSM:18777, BCCM/LMG:24256, CNCM:I-3511, personal::GM2212
homotypic synonym:
"Francisella piscicida" Ottem et al. 2007 in [Ottem KF et al. (2007)]
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Thiotrichales; Francisellaceae; Francisella
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 4,520 3,860 381
Protein 3,562 2,079 -
Genome 1 1 -
Popset 16 13 -
PubMed Central 117 117 -
Gene 5,912 1,954 -
SRA Experiments 35 21 -
Protein Clusters 1,121 1,121 -
Identical Protein Groups 2,365 2,258 -
BioProject 8 1 -
BioSample 29 21 1
Assembly 24 21 -
Taxonomy 9 1 -

Comments and References:

Validation List No. 128 (2009)
Validation List No. 128: "List of new names and new combinations previously effectively, but not validly, published." Int. J. Syst. Evol. Microbiol. (2009) 59(7):1555-1556.
Ottem KF et al. (2009), PubMed: abstract
Ottem, K.F., Nylund, A., Karlsbakk, E., Friis-Moller, A., and Kamaishi, T. "Elevation of Francisella philomiragia subsp. noatunensis Mikalsen et al. (2007) to Francisella noatunensis comb. nov. [syn. Francisella piscicida Ottem et al. (2008) syn. nov.] and characterization of Francisella noatunensis subsp. orientalis subsp. nov., two important fish pathogens." J. Appl. Microbiol. (2009) 106(4):1231-1243.
Ramirez-Paredes JG et al. (2020), PubMed: abstract
Ramirez-Paredes, J.G., Larsson, P., Thompson, K.D., Penman, D.J., Busse, H.-J., Öhrman, C., Sjödin, A., Soto, E., Richards, R.H., Adams, A., and Colquhoun, D.J. "Reclassification of Francisella noatunensis subsp. orientalis Ottem 2009 as Francisella orientalis sp. nov., Francisella noatunensis subsp. subsp. nov. and emended description of Francisella noatunensis." Int. J. Syst. Evol. Microbiol. (2020) 70(3):2034-2048.
Mikalsen J et al. (2007), PubMed: abstract
Mikalsen J, Olsen AB, Tengs T, Colquhoun DJ. 2007. Francisella philomiragia subsp. noatunensis subsp. nov., isolated from farmed Atlantic cod (Gadus morhua L.). Int J Syst Evol Microbiol 57(Pt 9):1960-1965.
Validation List No. 119 (2008), PubMed: abstract
Validation List No. 119: "List of new names and new combinations previously effectively, but not validly, published." Int. J. Syst. Evol. Microbiol. (2008) 58:1-2. [Erratum: Int. J. Syst. Evol. Microbiol. (2008) 58:745.]
Ottem KF et al. (2007), PubMed: abstract
Ottem, K.F., Nylund, A., Karlsbakk, E., Friis-Moller, A., Krossoy, B., and Knappskog, D. "New species in the genus Francisella (Gammaproteobacteria; Francisellaceae); Francisella piscicida sp. nov. isolated from cod (Gadus morhua)." Arch. Microbiol. (2007) 188(5):547-550.
List of Changes in Taxonomic Opinion No. 10 (2009), other link:https://ijs.microbiologyresearch.org/content/journal/ijsem/10.1099/ijs.0.016261-0
Euzeby, J.P. "Notification of changes in taxonomic opinion previously published outside the IJSEM." Int. J. Syst. Evol. Microbiol. (2009) 59:1559-1560.
Olsen AB et al. (2006)
Olsen, A.B., Mikalsen, J., Rode, M., Alfjorden, A., Hoel E., Straum-Lie, K., Haldorsen R., and Colquhoun, D.J. "A novel systemic granulomatous inflammatory disease in farmed Atlantic cod, Gadus morhua L., associated with a bacterium belonging to the genus Francisella." J. Fish Dis. (2006) 29:307-311.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Francisella noatunensis meta-databases BacDive
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Francisella noatunensis (Mikalsen, Olsen, Tengs & Colquhoun, 2007) Ottem, Nylund, Karlsbakk, Friis-Moller & Kamaishi, 2009 taxonomy/phylogenetic Ocean Biogeographic Information System
Francisella noatunensis | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
Francisella noatunensis (Mikalsen, Olsen, Tengs & Colquhoun, 2007) Ottem, Nylund, Karlsbakk, Friis-Moller & Kamaishi, 2009 taxonomy/phylogenetic World Register of Marine Species
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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