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Taxonomy browser (Nitrososphaerota)

Nitrososphaerota

Taxonomy ID: 651137 (for references in articles please use NCBI:txid651137)
current name
Nitrososphaerota corrig. Brochier-Armanet et al. 2021 in [Oren A & Garrity GM (2021)]
homotypic synonym:
"Nitrososphaeraeota" Oren et al. 2015, effective name 1) in [Oren A et al. (2015)]
"Nitrososphaerota" Whitman et al. 2018, effective name 2),3) in [Whitman WB et al. (2018)]
includes:
"Candidatus Aigarchaeota" Nunoura et al. 2011, candidatus name 4)
NCBI BLAST name: archaea
Rank: phylum
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
"Candidatus Thaumarchaeota" Brochier-Armanet et al. 2008, candidatus name 5) in [Brochier-Armanet C et al. (2008)]
Lineage( full )
cellular organisms; Archaea; Thermoproteati
   Entrez records   
Database name Subtree links Direct links
Nucleotide 61,814 -
Protein 454,194 -
Structure 32 -
Genome 169 -
Popset 219 105
Conserved Domains 6 2
GEO Datasets 24 -
PubMed Central 3,836 2,713
Gene 79,142 -
SRA Experiments 1,124 145
Protein Clusters 1,829 -
Identical Protein Groups 1,734,439 -
BioProject 362 5
BioSample 4,859 148
Assembly 2,918 -
Taxonomy 1,305 1

Notes:

Comments and References:

Oren A & Garrity GM (2021), PubMed: abstract
Oren, A., and Garrity, G.M. "Valid publication of the names of forty-two phyla of prokaryotes." Int. J. Syst. Evol. Microbiol. (2021) 71(10):005056.
Oren A et al. (2015), PubMed: abstract
Oren, A., da Costa, M.S., Garrity, G.M., Rainey, F.A., Rosselló-Móra, R., Schink, B., Sutcliffe, I., Trujillo, M.E., and Whitman, W.B. "Proposal to include the rank of phylum in the International Code of Nomenclature of Prokaryotes." Int. J. Syst. Evol. Microbiol. (2015) 65(11):4284-4287.
Whitman WB et al. (2018), PubMed: abstract
Whitman, W.B., Oren, A., Chuvochina, M., da Costa, M.S., Garrity, G.M., Rainey, F.A., Rossello-Mora, R., Schink, B., Sutcliffe, I., Trujillo, M.E., and Ventura, S. "Proposal of the suffix -ota to denote phyla. Addendum to 'Proposal to include the rank of phylum in the International Code of Nomenclature of Prokaryotes'." Int. J. Syst. Evol. Microbiol. (2018) 68(3):967-969.
Brochier-Armanet C et al. (2008), PubMed: abstract
Brochier-Armanet, C., Boussau, B., Gribaldo, S., and Forterre, P. "Mesophilic Crenarchaeota: proposal for a third archaeal phylum, the Thaumarchaeota." Nat. Rev. Microbiol. 6(3):245-52.
Brochier-Armanet C et al. (2011)
Brochier-Armanet, C., Forterre, P., and Gribaldo, S. "Phylogeny and evolution of the Archaea: one hundred genomes later." Curr. Opin. Microbiol. (2011) 14:274-281. [Note: the authors propose that "Aigarchaeota" Nunoura et al. 2011 be included as a deep-branching member of the Thaumarchaeota.]
Nunoura T et al. (2011)
Nunoura, T., Takaki, Y., Kakuta, J., Nishi, S., Sugahara, J., Kazama, H., Chee, G.-J., Hattori, M., Kanai, A., Atomi, H., Takai, K., and Takami, H. "Insights into the evolution of Archaea and eukaryotic protein modifier systems revealed by the genome of a novel archaeal group." Nucleic Acids Res. (2011) 39:3204-3223.
Whitman WB et al. (2018)
Whitman, W.B., Oren, A., Chuvochina, M., da Costa, M.S., Garrity, G.M., Rainey, F.A., Rossello-Mora, R., Schink, B., Sutcliffe, I., Trujillo, M.E., and Ventura, S. "Proposal of the suffix -ota to denote phyla. Addendum to 'Proposal to include the rank of phylum in the International Code of Nomenclature of Prokaryotes'." Int. J. Syst. Evol. Microbiol. (2018) 68(3):967-969.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
36 records from this provider organism-specific Integrated Microbial Genomes
Thaumarchaeota taxonomy/phylogenetic Lifemap
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Thaumarchaeota Brochier-Armanet, Boussau, Gribaldo & Forterre, 2008 taxonomy/phylogenetic Ocean Biogeographic Information System
Nitrososphaerota | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
Thaumarchaeota Brochier-Armanet, Boussau, Gribaldo & Forterre, 2008 taxonomy/phylogenetic World Register of Marine Species
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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