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Taxonomy browser (Shewanella woodyi)

Shewanella woodyi

Taxonomy ID: 60961 (for references in articles please use NCBI:txid60961)
current name
Shewanella woodyi Makemson et al. 1997
type strain of Shewanella woodyi: ATCC:51908, CIP:105547, DSM:12036, personal::MS32
homotypic synonym:
Shewanella woodyi Makemson et al. 1997 emend. Thorell et al. 2019, emended name 1)
Shewanella woodyi Makemson et al. 1997 emend. Cao et al. 2021, emended name 2) in [Cao WR et al. (2021)]
NCBI BLAST name: g-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 459 321 10
Protein 17,093 11,780 -
Structure 2 2 -
Genome 1 1 -
Popset 2 2 -
GEO Datasets 3 - -
PubMed Central 140 140 -
Gene 5,098 1 -
SRA Experiments 6 1 -
Protein Clusters 2,464 2,464 -
Identical Protein Groups 12,756 12,223 -
BioProject 6 4 -
BioSample 6 3 1
Assembly 4 3 -
Taxonomy 2 1 -

Notes:

Comments and References:
Cao WR et al. (2021), PubMed: abstract
Cao, W.-R., Li, X., Sun, Y.-Y., Jiang, M.-Y., Xu, X.-D., and Li, Y.-J. "Shewanella nanhaiensis sp. nov., a marine bacterium isolated from sediment of South China Sea, and emended descriptions of Shewanella woodyi, Shewanella hanedai and Shewanella canadensis." Int. J. Syst. Evol. Microbiol. (2021) 71(12):005152.
Makemson JC et al. (1997)
Makemson, J.C., Fulayfil, N.R., Landry, W., Van Ert, L.M., Wimpee, C.F., Widder, E.A., and Case, J.F. "Shewanella woodyi sp. nov., an exclusively respiratory luminous bacterium isolated from the Alboran Sea." Int. J. Syst. Bacteriol. (1997) 47(4):1034-1039.
Thorell K et al. (2019)
Thorell, K., Meier-Kolthoff, J.P., Sjöling, Å, and Martín-Rodríguez, A.J. "Whole-genome sequencing redefines Shewanella taxonomy." Front. Microbiol. (2019) 10:1861.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Shewanella woodyi meta-databases BacDive
Shewanella woodyi Makemson et al. 1997 taxonomy/phylogenetic Encyclopedia of life
GOLD: Go0564342 organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Shewanella woodyi culture/stock collections Global Catalogue of Microorganisms
2905579459: Shewanella woodyi Alg231_23 organism-specific Integrated Microbial Genomes
Shewanella woodyi Makemson, Fulayfil, Landry, Van Ert, Wimpee, Widder & Case, 1997 taxonomy/phylogenetic Ocean Biogeographic Information System
Shewanella woodyi | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
Shewanella woodyi Makemson, Fulayfil, Landry, Van Ert, Wimpee, Widder & Case, 1997 taxonomy/phylogenetic World Register of Marine Species
Notes:
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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