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Taxonomy browser (Xanthomonas arboricola)

Xanthomonas arboricola

Taxonomy ID: 56448 (for references in articles please use NCBI:txid56448)
current name
Xanthomonas arboricola Vauterin et al. 1995
type strain of Xanthomonas arboricola: ATCC:49083, CFBP:2528, ICMP:35, BCCM/LMG:747, NCPPB:411
includes:
Xanthomonas sp. ICMP 16473
Xanthomonas sp. QM7601
NCBI BLAST name: g-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales; Lysobacteraceae; Xanthomonas
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 25,650 12,705 66
Protein 599,031 380,376 -
Genome 1 1 -
Popset 138 108 -
PubMed Central 302 287 -
Gene 17,244 12,849 -
SRA Experiments 122 66 -
Protein Clusters 1,037 1,037 -
Identical Protein Groups 233,287 212,410 -
BioProject 124 71 -
BioSample 198 111 1
Assembly 184 95 -
Taxonomy 18 1 -

Comments and References:

Fischer-Le Saux M et al. (2015)
Fischer-Le Saux, M., Bonneau, S., Essakhi, S., Manceau, C., and Jacques, M.A. "Aggressive emerging pathovars of Xanthomonas arboricola represent widespread epidemic clones that are distinct from poorly pathogenic strains, as revealed by multilocus sequence typing." Appl. Environ. Microbiol. (2015) 81:4651-4688.
Schaad NW et al. (2000)
Schaad, N.W., Vidaver, A.K., Lacy, G.H., Rudolph, K., Jones, J.B. "Evaluation of proposed amended names of several pseudomonads and xanthomonads and recommendations." Phytopathology (2000) 90:208-213. [No PubMed record available.]
Vauterin L et al. (1995), doi:10.1099/00207713-45-3-472
Vauterin, L., Hoste, B., Kersters, K., and Swings, J. "Reclassification of Xanthomonas." Int. J. Syst. Bacteriol. (1995) 45(3):472-489. [No PubMed record available.]
Young JM et al. (1996) (reference with type strain information)
Young, J.M., Saddler, G.S., Takikawa, Y., De Boer, S.H., Vauterin, L., Gardan, L., Gvozdyak, R.I., and Stead, D.E. "Names of plant pathogenic bacteria 1864-1995." Rev. Plant Pathol. (1996) 75:721-763. [No PubMed record available.]

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Xanthomonas arboricola meta-databases BacDive
2 records from this provider organism-specific BioCyc
Xanthomonas arboricola Vauterin et al. 1995 taxonomy/phylogenetic Encyclopedia of life
3 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Xanthomonas arboricola culture/stock collections Global Catalogue of Microorganisms
70 records from provider organism-specific Integrated Microbial Genomes
Notes:
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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