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Taxonomy browser (Aspergillus niger)

Aspergillus niger

Taxonomy ID: 5061 (for references in articles please use NCBI:txid5061)
current name
Aspergillus niger Tieghem, 1867
homotypic synonym:
Aspergillus niger Tiegh.
culture from neotype of Aspergillus niger: CBS:554.65, NRRL:326, ATCC:16888
NCBI BLAST name: ascomycete fungi
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 4 (Mold Mitochondrial; Protozoan Mitochondrial; Coelenterate Mitochondrial; Mycoplasma; Spiroplasma)
Other names:
heterotypic synonym
Aspergillus lacticoffeatus
homotypic synonym:
Aspergillus lacticoffeatus Frisvad & Samson, 2004
culture from holotype of Aspergillus lacticoffeatus: CBS:101883
Lineage( full )
cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Circumdati
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 94,634 81,116 42
Protein 498,566 448,774 -
Structure 139 112 -
Genome 1 1 -
Popset 662 662 -
GEO Datasets 1,031 1,030 -
PubMed Central 18,823 18,823 -
Gene 32,218 14,448 -
SRA Experiments 2,399 2,330 -
Identical Protein Groups 144,967 133,296 -
BioProject 1,771 1,497 -
BioSample 2,853 2,819 28
Assembly 122 113 -
PubChem BioAssay 1,653 1,653 -
Taxonomy 13 1 -

Comments and References:

image:Aspergillus niger
Index Fungorum
Name verified on date of entry in the Index Fungorum, maintained by CABI Biosciences, Centraalbureau voor Schimmelcultures and Landcare Research.
Meijer et al. (2011), doi:10.3114%2Fsim.2011.69.02
Meijer M. et al. Growth and hydrolase profiles can be used as characteristics to distinguish Aspergillus niger and other black aspergilli. Stud Mycol. 69:19-30.
Samson et al. (2004)
Samson RA, Houbraken JAMP, Kuijpers AFA, Frank JM, Frisvad JC. New ochratoxin A or sclerotium producing species in Aspergillus section Nigri (Studies in Mycology 50: 45-61, 2004)

Genome Information

Go to NCBI genomic BLAST page for Aspergillus niger
Genome view: 8 chromosomes
Names I II III IV V VI VII VIII

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Aspergillus niger taxonomy/phylogenetic Encyclopedia of life
GOLD: 125 Organisms organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Aspergillus niger culture/stock collections Global Catalogue of Microorganisms
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
Aspergillus niger Tiegh. 1867 taxonomy/phylogenetic Index Fungorum
Aspergillus niger Tieghem taxonomy/phylogenetic MycoBank
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Aspergillus niger Tiegh., 1867 taxonomy/phylogenetic Ocean Biogeographic Information System
Aspergillus niger taxonomy/phylogenetic Systematic Mycology and Microbiology Laboratory, Fungal Databases
2 records from this provider organism-specific WebScipio - eukaryotic gene identification
Aspergillus niger Tiegh., 1867 taxonomy/phylogenetic World Register of Marine Species
10 records from this provider organism-specific diArk - a resource for eukaryotic genome research
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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