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Taxonomy browser (Sporobolomyces pararoseus)

Sporobolomyces pararoseus

Taxonomy ID: 5003 (for references in articles please use NCBI:txid5003)
current name
Sporobolomyces pararoseus H.C. Olson & B.W. Hammer, 1937
NCBI BLAST name: basidiomycete fungi
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 4 (Mold Mitochondrial; Protozoan Mitochondrial; Coelenterate Mitochondrial; Mycoplasma; Spiroplasma)
Other names:
heterotypic synonym
Sporidiobolus pararoseus Fell & Tallman, 1981
type material of Sporidiobolus pararoseus: ATCC:11386, CBS:491, BCRC:21384, IFO:0376, NRRL:Y-5484, VKM:Y-704
heterotypic synonym
Sporobolomyces shibatanus
basionym:
Torula shibatana Okun., 1931
homotypic synonym:
Sporobolomyces shibatanus (Okun.) Verona & Cif., 1939
Lineage( full )
cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Microbotryomycetes; Sporidiobolales; Sporidiobolaceae; Sporobolomyces
   Entrez records   
Database name Direct links
Nucleotide 1,521
Protein 16,322
Genome 1
Popset 36
PubMed Central 126
SRA Experiments 34
Identical Protein Groups 28
BioProject 11
BioSample 15
Assembly 1
Taxonomy 1

Comments and References:

Bai F-Y et al. (2002), doi:10.1099/ijs.0.02297-0
Bai, F.-Y., Zhao, J.-H., Takashima, M., Jia, J.-H., Boekhout, T. and Nakase, T. 2002. Reclassification of the Sporobolomyces roseus and Sporidiobolus pararoseus complexes, with the description of Sporobolomyces phaffii sp. nov. International Journal of Systematic and Evolutionary Microbiology 52: 2309-2314. DOI : http://dx.doi.org/10.1099/ijs.0.02297-0

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
GOLD: Go0112289 organism-specific Genomes On Line Database
Sporidiobolus pararoseus culture/stock collections Global Catalogue of Microorganisms
2 records from this provider taxonomy/phylogenetic Index Fungorum
2 records from this provider taxonomy/phylogenetic MycoBank
2 records from this provider taxonomy/phylogenetic Systematic Mycology and Microbiology Laboratory, Fungal Databases
2 records from this provider organism-specific WebScipio - eukaryotic gene identification
2 records from provider organism-specific diArk - a resource for eukaryotic genome research
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

Organism modifiers

To hide organism modifiers click here
strain
18_Sp [1] 1DMK-1-3 [1] 1F2/13 [1 1] 2-F2 [1]
3-F1 [1] 5B [1 1] 8A [2] ABEC7 [1]
ANT12-045 [1] APY4 [1] AUMC 10752 [1] AUMC 7791 [1]
B-NC-13-OM03 [1] BJ15 [1] C1 [1] CAB 2692 [1 1]
CBS 13661 [2 2] CBS 13666 [2 2] CBS 13667 [2 2] CBS 13673 [2 2]
CBS 13675 [2 2] CBS 13677 [2 2] CBS 13680 [2 2] CBS 13692 [2 2]
CBS 2638 [1 1] CBS 4216 [3 3] CBS 484 [2 1 3] CBS 491 [5 3 2]
CBS 499 [2 2 3] CBS 5329 [1 1] CBS 7716 [3 3 1] CBS484 [1]
CMU-THA52 [1] CPO 10.806 [1] CPO 10.807 [1] CZ410-1 [1 1]
DAG III [1] DMKU-CE29 [1] DMKU-CE34 [1] DMKU-RE112 [1]
DMKU-RK511 [1] DMKU-RP134 [1] DMKU-RP266 [1] DMKU-RP309 [1]
DMKU-RP85 [1] DMKU-SE103 [1] DMKU-SE11 [1] DMKU-SE116 [1]
EXF-11826 [1] F483 [1] F486 [1] FH1 [1 1]
G1 [1 1] GY4L08 [1 1] I-Y376b [1 1] I-Y388b [1 1]
IFM 48656 [1 1] J1 [1] JCM 5350 [2] JCM 5732 [1]
JCM3765 [1 375 7918 1] JCM5350 [1 811 8376 1] JE-26 [1] JM13 [1]
JQ2-1 [1] JYC1062 [1 1] KCTC 17092 [1 1] LC1L1177 [1]
LC1L1193 [1] LC2L1182 [1] LC2L1183 [1] LC3L11101 [1]
LC3L1196 [1] LC5L1133 [1] LO5L1169 [1] LYCJ-2 [1]
LusB5.21 [1] LusC5.10 [1] LusC5.13 [1] LusC5.20 [1]
LusC5.5 [1] M50 [1] MCA 2992 [3] MCA 3650 [3]
MCA 3662 [4 1] MCA 3685 [3] MCA 3686 [3] MCA 3706 [3]
MCA 3724 [3] MCA 3734 [4 1] MCA3724 [1 1] MuY9 [1 1]
N7-1 [1 1] N7-2 [1 1] NGR [3 3 4 1 12] NL 8208205 [1 1]
P1-30 [1 1] PC1-L11154 [1] PC3-L11175 [1] PFY-49 [1]
PFY-X1 [1] PFY-Z1 [1] PFY01 [1] PomC5.1 [1]
PomC5.11 [1] PomC5.12 [1] PomC5.14 [1] PomC5.15 [1]
PomC5.19 [1] PomC5.24 [1] PomC5.3 [1] PomC5.4 [1]
PomC5.6 [1] PomC5.7 [1] PomC5.9 [1] PuiB5.15 [1]
PuiC5.2 [1] PuiC5.23 [1] PuiC5.7 [1] PuiC5.8 [1]
QDFS-2 [1] SB1 [1] SF1-2 10-2I1 [1] SIA 33_1 [1]
T2B1c.1-H [1] T2B1c.10-H [1] T2B1c.7-H [1] TA200 [1]
TC32 [1] TREC5 [1] U1 [2 1] UCDFST 09-1305 [2 2]
UCDFST 44-17 [2 2] UCDFST 67-552 [2 2] UCDFST 68-350 [3 2] WUT159 [1]
Y-2 [2 2] Y1 [5 1 3] YCXT3 [1] YE-107 [2]
YE-32 [2] YE-60 [2] YFA120493 [1] YG18 [1]
YM24916 [1] YM25618 [1] YM26352 [1] YM28467 [1]
YP66 [1] YY40 [1 1] YY41 [1 1] ZIM 611 [1]
ZIM 631 [1]
cultivar
Kyoho [1]
isolate
15second week [1] 22261 [1] 22first week [1] 29second week [1]
2second week [1] 3 [1] 30second week [1] 3second week [1]
6 [1] 60 [1] 74second week [1] 86second week [1]
8first week [1] B-NC-12-OM03 [1] BRL_2013_US2-127 [1] BRL_2013_US2-136 [1]
C1/04 [2] C44 [1 1] CMAA 1106 [1] CMIFS 012 [1]
CMIFS 013 [1] CMIFS 014 [1] CMIFS 015 [1] FBKL2.91201 [1]
FBKL2.91210 [1] FBKL2.91597 [1] FLA36.1 [1] JCM 5350 [1]
JD-2 [1] JL226 [1] JL251 [1] JMS4 [1]
LC1.1 [1] LT18 [2] LT25 [1] LT27 [1]
LT29 [1] MD21_1 [1] ML3503 [2] PH-Gra1 [2]
PSWCC_108 [1] PSWCC_111 [1] PSWCC_133 [1] PSWCC_48 [1]
PSWCC_50 [1] PSWCC_54 [1] PSWCC_55 [1] PSWCC_57 [1]
PSWCC_85 [1] PSWCC_89 [1] PSWCC_91 [1] PSWCC_95 [1]
PSWCC_97 [1] R96972_ITS [1] RL255 [1] RP247_7 [1]
SO_A [2] SSM8 [1] SZ-2 10-2I7 [1] Sp1-II [1]
TBRC-BCC 63403 [3 3] TSBY-2 [1] U [1 1] UASWS2723 GGB-A02 [1]
UASWS2725 GGB-C01 [1] UASWS2727 GGB-C03 [1] UASWS2730 GGB-D01 [1] UASWS2755 GGI-A02 [1]
URM:7405 [1] WH1 [1] X2P1HFf [2] YM29392 [1]
YP-232 [3] YP-235 [2] YP-241 [3] YP-251 [3]
YP-255 [3] YP-257 [1] YP-258 [1] YP-260 [3]
ZZFS-1 [1] lake water [1] soil [1 2 1] unkown3 [1]
nat-host
grape [2]
specimen-voucher
F.AURO [1 1] LSUM:MCA 2992 [3] LSUM:MCA 3650 [3] LSUM:MCA 3662 [4 1]
LSUM:MCA 3685 [3] LSUM:MCA 3686 [3] LSUM:MCA 3706 [3] LSUM:MCA 3724 [3]
LSUM:MCA 3734 [4 1]
culture-collection
CBS:13661 [2 2] CBS:13666 [2 2] CBS:13667 [2 2] CBS:13673 [2 2]
CBS:13675 [2 2] CBS:13677 [2 2] CBS:13680 [2 2] CBS:13692 [2 2]
CBS:2638 [2 2] CBS:4216 [3 3] CBS:484 [3 3 1] CBS:491 [4 2 1]
CBS:499 [5 4 1] CBS:5331 [2 2] CBS:7716 [2 2] DMKU:CE29 [1]
DMKU:CE34 [1] DMKU:RP134 [1] DMKU:RP266 [1] DMKU:RP309 [1]
DMKU:RP85 [1] DMKU:SE103 [1] DMKU:SE11 [1] DMKU:SE116 [1]
DSM:101925 [1] JCM:3765 [1 372 7915 1] JCM:5350 [1 807 8372 1]

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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