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Taxonomy browser (Crocosphaera subtropica ATCC 51142)

Crocosphaera subtropica ATCC 51142

Taxonomy ID: 43989 (for references in articles please use NCBI:txid43989)
current name
Crocosphaera subtropica ATCC 51142
equivalent:
Cyanothece sp. ATCC 51142
Cyanothece sp. BH68 1)
Cyanothece sp. BH68K 2)
NCBI BLAST name: cyanobacteria
Rank: strain
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Bacillati; Cyanobacteriota/Melainabacteria group; Cyanobacteriota; Cyanophyceae; Oscillatoriophycideae; Chroococcales; Aphanothecaceae; Crocosphaera; Crocosphaera subtropica
   Entrez records   
Database name Direct links Links from type
Nucleotide 126 25
Protein 7,053 -
Structure 22 -
Genome 1 -
GEO Datasets 73 -
Gene 5,368 -
SRA Experiments 3 -
Protein Clusters 9 -
Identical Protein Groups 6,597 -
BioProject 5 -
BioSample 32 2
Assembly 1 -
Taxonomy 1 -

Notes:

Comments and References:

genome sequence
Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.
Mareš J et al. (2019)
Mareš, J., Johansen, J.R., Hauer, T., Zima, J. Jr., Ventura, S., Cuzman, O., Tiribilli ,B., and Kaštovský, J. "Taxonomic resolution of the genus Cyanothece (Chroococcales, Cyanobacteria), with a treatment on Gloeothece and three new genera, Crocosphaera, Rippkaea, and Zehria." J. Phycol. (2019) 55(3):578-610.
Gao F & Zhang CT (2008)
Gao, F., and Zhang, C.-T. "Origins of replication in Cyanothece 51142."
Proc. Natl. Acad. Sci. USA (2008) 105:E125; doi:10.1073/pnas.0809987106
Reddy KJ et al. (1993)
Reddy, K.J., Haskell, J.B., Sherman, D.M., and Sherman, L.A. "Unicellular, aerobic nitrogen-fixing cyanobacteria of the genus Cyanothece." J. Bacteriol. (1993) 175:1284-1292.
Welsh EA et al. (2008)
Welsh, E.A., Liberton, M., Stockel, J., Loh, T., Elvitigala, T., Wang, C., Wollam, A., Fulton, R.S., Clifton, S.W., Jacobs, J.M., Aurora, R., Ghosh, B.K., Sherman, L.A., Smith, R.D., Wilson, R.K., and Pakrasi, H.B. "The genome of Cyanothece 51142, a unicellular diazotrophic cyanobacterium important in the marine nitrogen cycle." Proc. Natl. Acad. Sci. USA (2008) 105:15094-15099.
Welsh EA et al. (2008b)
Welsh, E.A., Liberton, M., Stockel, J., and Pakrasi, H.B. "Reply to Zhang et al.: Identification of origins of replication in the Cyanothece 51142 genome." Proc. Natl. Acad. Sci. USA (2008) 105:E126-E127; doi:10.1073/pnas.0810681106

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
2 records from this provider organism-specific BioCyc
GOLD: 2 Organisms organism-specific Genomes On Line Database
641522622: Crocosphaera subtropica BH68 organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Notes:
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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