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Taxonomy browser (Olivibacter domesticus)

Olivibacter domesticus

Taxonomy ID: 407022 (for references in articles please use NCBI:txid407022)
current name
Olivibacter domesticus Siddiqi et al. 2018
basionym:
Pseudosphingobacterium domesticum Vaz-Moreira et al. 2007 emend. Hahnke et al. 2016
type strain of Pseudosphingobacterium domesticum: CCUG:54353, BCCM/LMG:23837, personal::DC-186, DSM:18733
NCBI BLAST name: CFB group bacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Olivibacter
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 84 84 50
Protein 11,157 11,157 -
Genome 1 1 -
Popset 1 1 -
PubMed Central 3 3 -
SRA Experiments 1 - -
Identical Protein Groups 6,381 6,381 -
BioProject 4 2 -
BioSample 2 1 2
Assembly 2 2 -
Taxonomy 2 1 -

Comments and References:

Hahnke RL et al. (2016)
Hahnke, R.L., Meier-Kolthoff, J.P., García-López, M., Mukherjee, S., Huntemann, M., Ivanova, N.N., Woyke, T., Kyrpides, N.C., Klenk, H.-P., and Göker, M. "Genome-based taxonomic classification of Bacteroidetes." Front. Microbiol. (2016) 7:2003.
List of Changes in Taxonomic Opinion No. 26 (2017)
"Notification of changes in taxonomic opinion previously published outside the IJSEM." Int. J. Syst. Evol. Microbiol. (2017) 67(7):2081-2086.
Siddiqi MZ et al. (2018)
Siddiqi, M.Z., Liu, Q., Lee, S.Y., Choi, K.D., and Im, W.-T. "Olivibacter ginsenosidimutans sp. nov., with ginsenoside-converting activity isolated from compost, and reclassification of Pseudosphingobacterium domesticum as Olivibacter domesticus comb. nov." Int. J. Syst. Evol. Microbiol. (2018) 68(8):2509-2514.
Vaz-Moreira I et al. (2007)
Vaz-Moreira, I., Nobre, M.F., Nunes, O.C., and Manaia, C.M. "Pseudosphingobacterium domesticum gen. nov., sp. nov., isolated from home-made compost." Int. J. Syst. Evol. Microbiol. (2007) 57:1535-1538.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Olivibacter domesticus meta-databases BacDive
2 records from this provider organism-specific BioCyc
GOLD: Go0102843 organism-specific Genomes On Line Database
2 records from this provider culture/stock collections Global Catalogue of Microorganisms
2599185177: Olivibacter domesticus DSM 18733 organism-specific Integrated Microbial Genomes
Olivibacter domesticus | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
Notes:
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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