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Taxonomy browser (Mycolicibacterium chlorophenolicum)

Mycolicibacterium chlorophenolicum

Taxonomy ID: 37916 (for references in articles please use NCBI:txid37916)
current name
Mycolicibacterium chlorophenolicum (Apajalahti et al. 1986) Gupta et al. 2018
basionym:
Rhodococcus chlorophenolicus Apajalahti et al. 1986
type strain of Rhodococcus chlorophenolicus: ATCC:49826, CIP:104189, DSM:43826, HAMBI:2278, IEGM:559, IFO:15527, JCM:7439, NBRC:15527, NRRL:B-16528, personal::PCP-I
homotypic synonym:
Mycobacterium chlorophenolicum (Apajalahti et al. 1986) Häggblom et al. 1994 emend. Nouioui et al. 2018, emended name 1) in [Nouioui I et al. (2018c)]
Mycobacterium chlorophenolicum (Apajalahti et al. 1986) Briglia et al. 1994
Mycobacterium chlorophenolicum (Apajalahti et al. 1986) Haggblom et al. 1994
Mycobacterium chlorophenolicus
includes:
Mycobacterium sp. ATCC 25793
NCBI BLAST name: high G+C Gram-positive bacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Rhodococcus chlorophenolicus (strain PCP-1)
Lineage( full )
cellular organisms; Bacteria; Bacillati; Actinomycetota; Actinomycetes; Mycobacteriales; Mycobacteriaceae; Mycolicibacterium
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 3,431 187 3,402
Protein 13,576 13,569 -
Genome 1 1 -
Popset 14 14 -
PubMed Central 76 76 -
SRA Experiments 8 3 -
Protein Clusters 6 6 -
Identical Protein Groups 8,857 8,837 -
BioProject 7 5 -
BioSample 7 4 5
Assembly 3 1 -
Taxonomy 2 1 -

Notes:

Comments and References:
Nouioui I et al. (2018c), doi: 10.3389/fmicb.2018.02007, PubMed: abstract
Nouioui, I., Carro, L., García-López, M., Meier-Kolthoff, J.P., Woyke, T., Kyrpides, N.C., Pukall, R., Klenk, H.-P., Goodfellow, M., and Göker M. "Genome-based taxonomic classification of the phylum Actinobacteria." Front. Microbiol. (2018) 9:2007.
Mycobacterium chlorophenolicum
Mycobacterium chlorophenolicum (Apajalahti et al. 1986) Haggblom et al. 1994 has priority over Briglia et al. (1994).
Apajalahti JHA et al. (1986)
Apajalahti, J.H.A., Karpanoja, P., and Salkinoja-Salonen, M.S. "Rhodococcus chlorophenolicus sp. nov., a chlorophenol-mineralizing actinomycete." Int. J. Syst. Bacteriol. (1986) 36:246-251.
Briglia M et al. (1994)
Briglia, M., Eggen, R.I., Van Elsas, D.J., and De Vos, W.M. "Phylogenetic evidence for transfer of pentachlorophenol-mineralizing Rhodococcus chlorophenolicus PCP-I(T) to the genus Mycobacterium." Int. J. Syst. Bacteriol. (1994) 44:494-498.
Gupta RS et al. (2018)
Gupta, R.S., Lo, B., and Son, J. "Phylogenomics and comparative genomic studies robustly support division of the genus Mycobacterium into an emended genus Mycobacterium and four novel genera." Front. Microbiol. (2018) 9:67. [Corrigendum: Front. Microbiol. (2019) 10:714. (PMID 31024493)]
Haggblom MM et al. (1994)
Haggblom, M.M., Nohynek, L.J., Palleroni, N.J., Kronqvist, K., Nurmiaho-Lassila, E.L., Salkinoja-Salonen, M.S., Klatte, S., and Kroppenstedt, R.M. "Transfer of polychlorophenol-degrading Rhodococcus chlorophenolicus (Apajalahti et al. 1986) to the genus Mycobacterium as Mycobacterium chlorophenolicum comb. nov." Int. J. Syst. Bacteriol. (1994) 44:485-493. [Erratum: Int. J. Syst. Bacteriol. (1994) 44:854.]
Simmon KE et al. (2009)
Simmon, K.E., Low, Y.Y., Brown-Elliott, B.A., Wallace, R.J. Jr., and Petti, C.A. "Phylogenetic analysis of Mycobacterium aurum and Mycobacterium neoaurum with redescription of M. aurum culture collection strains." Int. J. Syst. Evol. Microbiol. (2009) 59:1371-1375.
VALIDATION LIST No. 181 (2018)
Validation List No. 181: "List of new names and new combinations previously effectively, but not validly, published." Int. J. Syst. Evol. Microbiol. (2018) 68:1411-1417.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Mycobacterium chlorophenolicum meta-databases BacDive
2 records from this provider organism-specific BioCyc
Mycobacterium chlorophenolicum (Apajalahti et al. 1986) Briglia et al., 1994 taxonomy/phylogenetic Encyclopedia of life
GOLD: 2 Organisms organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Mycobacterium chlorophenolicum culture/stock collections Global Catalogue of Microorganisms
2 records from this provider organism-specific Integrated Microbial Genomes
Mycobacterium chlorophenolicum taxonomy/phylogenetic Lifemap
Mycolicibacterium chlorophenolicum | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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