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Taxonomy browser (Salinispora pacifica)

Salinispora pacifica

Taxonomy ID: 351187 (for references in articles please use NCBI:txid351187)
current name
Salinispora pacifica Ahmed et al. 2014
type strain of Salinispora pacifica: personal::CNR-114, KACC:17160, DSM:45820
homotypic synonym:
"Salinispora pacifica" Oh et al. 2006, effective name 1)
Salinispora pacifica Ahmed et al. 2014 emend. Nouioui et al. 2018, emended name 2) in [Nouioui I et al. (2018c)]
NCBI BLAST name: high G+C Gram-positive bacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Actinomycetota; Actinomycetes; Micromonosporales; Micromonosporaceae; Salinispora
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 11,084 326 209
Protein 8,357 8,278 -
Genome 1 1 -
Popset 16 16 -
PubMed Central 122 122 -
Gene 15,213 1 -
SRA Experiments 31 3 -
Protein Clusters 6,618 6,618 -
Identical Protein Groups 8,446 8,149 -
BioProject 42 - -
BioSample 53 4 1
Assembly 6 - -
Taxonomy 40 1 -

Notes:

Comments and References:

Nouioui I et al. (2018c), doi: 10.3389/fmicb.2018.02007, PubMed: abstract
Nouioui, I., Carro, L., García-López, M., Meier-Kolthoff, J.P., Woyke, T., Kyrpides, N.C., Pukall, R., Klenk, H.-P., Goodfellow, M., and Göker M. "Genome-based taxonomic classification of the phylum Actinobacteria." Front. Microbiol. (2018) 9:2007.
Ahmed L et al. (2013)
Ahmed, L., Jensen, P.R., Freel, K.C., Brown, R., Jones, A.L., Kim, B.Y., and Goodfellow, M. "Salinispora pacifica sp. nov., an actinomycete from marine sediments." Antonie van Leeuwenhoek (2013) 103:1069-1078.
Jensen PR & Mafnas C (2006)
Jensen, P.R., and Mafnas, C. "Biogeography of the marine actinomycete Salinispora." Environ. Microbiol. (2006) 8:1881-1888.
Oh DC et al. (2006)
Oh, D.-C., Williams, P.G., Kauffman, C.A., Jensen, P.R., and Fenical, W. "Cyanosporasides A and B, chloro- and cyano-cyclopenta[a]indene glycosides from the marine actinomycete 'Salinispora pacifica'." Org. Lett. (2006) 8:1021-1024.
VALIDATION LIST No. 158 (2014)
Validation List No. 158: "List of new names and new combinations previously effectively, but not validly, published." Int. J. Syst. Evol. Microbiol. (2014) 64(7):2184-2187.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Salinispora pacifica meta-databases BacDive
GOLD: Go0112030 organism-specific Genomes On Line Database
Salinispora pacifica | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
Salinispora pacifica Ahmed, Jensen, Freel, Brown, Jones, Kim & Goodfellow, 2013 taxonomy/phylogenetic World Register of Marine Species
Notes:
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A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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