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Taxonomy browser (Echinicola pacifica)

Echinicola pacifica

Taxonomy ID: 346377 (for references in articles please use NCBI:txid346377)
current name
Echinicola pacifica Nedashkovskaya et al. 2006 in [Nedashkovskaya OI et al. (2006)]
type strain of Echinicola pacifica: KCTC:12368, KMM:6172, BCCM/LMG:23350, DSM:19836
homotypic synonym:
Echinicola pacifica Nedashkovskaya et al. 2006 emend. Hahnke et al. 2016, emended name 1)
includes:
Bacteroidetes bacterium KMM 6166
Bacteroidetes bacterium KMM 6172
Bacteroidetes bacterium KMM 6173
NCBI BLAST name: CFB group bacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 129 51 126
Protein 7,968 7,968 -
Genome 1 1 -
PubMed Central 25 25 -
SRA Experiments 1 - -
Protein Clusters 2,910 2,910 -
Identical Protein Groups 4,963 4,963 -
BioProject 2 1 -
BioSample 2 1 2
Assembly 2 1 -
Taxonomy 2 1 -

Notes:

Comments and References:
Nedashkovskaya OI et al. (2006), PubMed: abstract
Nedashkovskaya, O.I., Kim, S.B., Vancanneyt, M., Lysenko, A.M., Shin, D.S., Park, M.S., Lee, K.H., Jung, W.J., Kalinovskaya, N.I., Mikhailov, V.V., Bae, K.S., and Swings, J. "Echinicola pacifica gen. nov., sp. nov., a novel flexibacterium isolated from the sea urchin Strongylocentrotus intermedius." Int. J. Syst. Evol. Microbiol. (2006) 56(5):953-958.
Hahnke RL et al. (2016)
Hahnke, R.L., Meier-Kolthoff, J.P., García-López, M., Mukherjee, S., Huntemann, M., Ivanova, N.N., Woyke, T., Kyrpides, N.C., Klenk, H.-P., and Göker, M. "Genome-based taxonomic classification of Bacteroidetes." Front. Microbiol. (2016) 7:2003.
List of Changes in Taxonomic Opinion No. 26 (2017)
"Notification of changes in taxonomic opinion previously published outside the IJSEM." Int. J. Syst. Evol. Microbiol. (2017) 67(7):2081-2086.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Echinicola pacifica meta-databases BacDive
2 records from this provider organism-specific BioCyc
Echinicola pacifica Nedashkovskaya et al. 2006 taxonomy/phylogenetic Encyclopedia of life
Echinicola pacifica culture/stock collections Global Catalogue of Microorganisms
8065190117: Echinicola pacifica KCTC 12368 organism-specific Integrated Microbial Genomes
Echinicola pacifica Nedashkovskaya, Kim, Vancanneyt, Lysenko, Shin, Park, Lee, Jung, Kalinovskaya, Mikhailov, Bae & Swings, 2006 taxonomy/phylogenetic Ocean Biogeographic Information System
Echinicola pacifica (T) | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
Echinicola pacifica Nedashkovskaya, Kim, Vancanneyt, Lysenko, Shin, Park, Lee, Jung, Kalinovskaya, Mikhailov, Bae & Swings, 2006 taxonomy/phylogenetic World Register of Marine Species
Notes:
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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