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Taxonomy browser (Phaeobacter)

Phaeobacter

Taxonomy ID: 302485 (for references in articles please use NCBI:txid302485)
current name
Phaeobacter Martens et al. 2006
homotypic synonym:
Phaeobacter Martens et al. 2006 emend. Yoon et al. 2007, emended name 1)
Phaeobacter Martens et al. 2006 emend. Breider et al. 2014, emended name 2)
Phaeobacter Martens et al. 2006 emend. Wirth and Whitman 2018, emended name 3) in [Wirth JS & Whitman WB (2018)]
NCBI BLAST name: a-proteobacteria
Rank: genus
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; Roseobacteraceae
   Entrez records   
Database name Subtree links Direct links
Nucleotide 9,374 -
Protein 491,771 9,381
Genome 7 1
Popset 75 75
GEO Datasets 82 -
PubMed Central 609 571
Gene 36,434 -
SRA Experiments 542 -
Protein Clusters 3,576 356
Identical Protein Groups 230,476 9,381
BioProject 109 1
BioSample 427 -
Assembly 183 -
Taxonomy 223 1

Notes:

Comments and References:

Wirth JS & Whitman WB (2018), PubMed: abstract
Wirth, J.S., and Whitman, W.B. "Phylogenomic analyses of a clade within the roseobacter group suggest taxonomic reassignments of species of the genera Aestuariivita, Citreicella, Loktanella, Nautella, Pelagibaca, Ruegeria, Thalassobius, Thiobacimonas and Tropicibacter, and the proposal of six novel genera." Int. J. Syst. Evol. Microbiol. (2018) 68(7):2393-2411.
Phaeobacter (LPSN link)
Breider S et al. (2014)
Breider, S., Scheuner, C., Schumann, P., Fiebig, A., Petersen, J., Pradella, S., Klenk, H.-P., Brinkhoff, T., and Goker, M. "Genome-scale data suggest reclassifications in the Leisingera-Phaeobacter cluster including proposals for Sedimentitalea gen. nov. and Pseudophaeobacter gen. nov." Front. Microbiol. (2014) 5:416.
List of Changes in Taxonomic Opinion No. 21 (2015)
"Notification of changes in taxonomic opinion previously published outside the IJSEM." Int. J. Syst. Evol. Microbiol. (2015) 65(1):7-10.
Martens T et al. (2006)
Martens, T., Heidorn, T., Pukall, R., Simon, M., Tindall, B.J., and Brinkhoff, T. "Reclassification of Roseobacter gallaeciensis Ruiz-Ponte et al. 1998 as Phaeobacter gallaeciensis gen. nov., comb. nov., description of Phaeobacter inhibens sp. nov., antibiotic-producing members of the Roseobacter clade, reclassification of Ruegeria algicola (Lafay et al. 1995) Uchino et al. 1998 as Marinovum algicola gen. nov., comb. nov., and emended descriptions of the genera Roseobacter, Ruegeria and Leisingera." Int. J. Syst. Evol. Microbiol. (2006) 56:1293-1304.
Yoon JH et al. (2007f)
Yoon, J.-H., Kang, S.-J., Lee, S.-Y., and Oh, T.-K. "Phaeobacter daeponensis sp. nov., isolated from a tidal flat of the Yellow Sea in Korea." Int. J. Syst. Evol. Microbiol. (2007) 57:856-861.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Phaeobacter taxonomy/phylogenetic Encyclopedia of life
2687453711: Phaeobacter sp. O365 organism-specific Integrated Microbial Genomes
Phaeobacter taxonomy/phylogenetic Lifemap
Phaeobacter Martens, Heidorn, Pukall, Simon, Tindall & Brinkhoff, 2006 taxonomy/phylogenetic Ocean Biogeographic Information System
Phaeobacter Martens, Heidorn, Pukall, Simon, Tindall & Brinkhoff, 2006 taxonomy/phylogenetic World Register of Marine Species
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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