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Taxonomy browser (Chryseobacterium shigense)

Chryseobacterium shigense

Taxonomy ID: 297244 (for references in articles please use NCBI:txid297244)
current name
Chryseobacterium shigense Shimomura et al. 2005 emend. Montero-Calasanz et al. 2014
type strain of Chryseobacterium shigense: BAMY:1001, DSM:17126, NCIMB:14047, personal::GUM-Kaji
includes:
Chryseobacterium sp. 1107B-08
Chryseobacterium sp. 628-2-08
Chryseobacterium sp. 664-09
Chryseobacterium sp. 972B-08
NCBI BLAST name: CFB group bacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Flavobacteriia; Flavobacteriales; Weeksellaceae; Chryseobacterium group; Chryseobacterium
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 175 175 126
Protein 16,558 16,558 -
Genome 1 1 -
Popset 6 6 -
PubMed Central 12 12 -
Gene 1 1 -
SRA Experiments 5 5 -
Identical Protein Groups 9,228 9,228 -
BioProject 7 6 -
BioSample 5 5 2
Assembly 3 3 -
Taxonomy 2 1 -

Comments and References:

List of Changes in Taxonomic Opinion No. 21 (2015)
"Notification of changes in taxonomic opinion previously published outside the IJSEM." Int. J. Syst. Evol. Microbiol. (2015) 65(1):7-10.
Montero-Calasanz M del C et al. (2014b)
Montero-Calasanz, M. del C., Göker, M., Rohde, M., Spröer, C., Schumann, P., Busse, H.-J., Schmid, M., Klenk, H.-P., Tindall, B.J., and Camacho, M. "Chryseobacterium oleae sp. nov., an efficient plant growth promoting bacterium in the rooting induction of olive tree (Olea europaea L.) cuttings and emended descriptions of the genus Chryseobacterium, C. daecheongense, C. gambrini, C. gleum, C. joostei, C. jejuense, C. luteum, C. shigense, C. taiwanense, C. ureilyticum and C. vrystaatense." Syst. Appl. Microbiol. (2014) 37:342-350.
Shimomura K et al. (2005)
Shimomura, K., Kaji, S., and Hiraishi, A. "Chryseobacterium shigense sp. nov., a yellow-pigmented aerobic bacterium isolated from a lactic acid beverage" Int. J. Syst. Evol. Microbiol. (2005) 55:1903-1906. Published online 20 May 2005. DOI 10.1099/ijs.0.63690-0
Stine CB et al. (2018)
Stine, C.B., Li, C., Crosby, T.C., Hasbrouck, N.R., Lam, C., and Tadesse, D.A. "Draft whole-genome sequences of Chryseobacterium piscicola and Chryseobacterium shigense." Genome Announc. (2018) 6:e00413-18.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Chryseobacterium shigense meta-databases BacDive
Chryseobacterium shigense Shimomura et al. 2005 taxonomy/phylogenetic Encyclopedia of life
GOLD: Go0026693 organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Chryseobacterium shigense culture/stock collections Global Catalogue of Microorganisms
4 records from provider organism-specific Integrated Microbial Genomes
Notes:
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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