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Taxonomy browser (Staphylococcus saprophyticus)

Staphylococcus saprophyticus

Taxonomy ID: 29385 (for references in articles please use NCBI:txid29385)
current name
Staphylococcus saprophyticus (Fairbrother 1940) Shaw et al. 1951 (Approved Lists 1980) (Fairbrother 1940) Shaw et al. 1951
type strain of Staphylococcus saprophyticus (Fairbrother 1940) Shaw et al. 1951 (Approved Lists 1980): ATCC:15305, BCRC:10786, CCUG:3706, CIP:76.125, DSM:20229, IAM:12452, JCM:2427, BCCM/LMG:13350, NBRC:102446, NCAIM B.01067, NCCB:73011, NCTC:7292, NRRL:B-14751, CCM:883, NCIMB:8711
homotypic synonym:
"Staphylococcus saprophyticus" Fairbrother 1940, effective name 1)
Staphylococcus saprophyticus (Fairbrother 1940) Shaw et al. 1951 (Approved Lists 1980) emend. Madhaiyan et al. 2020, emended name 2) in [Madhaiyan M et al. (2020b)]
includes:
Staphylococcus sp. HAR3
Staphylococcus saprophyticus subsp. saprophyticus (Fairbrother 1940) Hajek et al. 1996
Staphylococcus saprophyticus ATCC 15305
Staphylococcus saprophyticus ATCC15305
Staphylococcus saprophyticus ATCC15305T
Staphylococcus saprophyticus MAFF911473
Staphylococcus saprophyticus NCTC 07292
NCBI BLAST name: firmicutes
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Staphylococcus saprophyticus subsp. bovis Hajek et al. 1996
type strain of Staphylococcus saprophyticus subsp. bovis: CCM:4410, CCUG:36975, CCUG:38042, CIP:105260, personal::KV 12, GTC:843, DSM:18669
Lineage( full )
cellular organisms; Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 32,970 32,692 386
Protein 269,876 259,398 -
Structure 12 - -
Genome 1 1 -
Popset 287 287 -
Conserved Domains 2 - -
GEO Datasets 4 4 -
PubMed Central 2,923 2,923 -
Gene 10,548 2,666 -
SRA Experiments 1,190 1,183 -
Protein Clusters 1,265 1,265 -
Identical Protein Groups 95,118 94,241 -
BioProject 102 94 -
BioSample 1,405 1,397 15
Assembly 550 545 -
Genetic Testing Registry 2 2 -
PubChem BioAssay 146 127 -
Taxonomy 5 1 -

Notes:

Comments and References:
Madhaiyan M et al. (2020b), PubMed: abstract
Madhaiyan, M., Wirth, J.S., and Saravanan, V.S. "Phylogenomic analyses of the Staphylococcaceae family suggest the reclassification of five species within the genus Staphylococcus as heterotypic synonyms, the promotion of five subspecies to novel species, the taxonomic reassignment of five Staphylococcus species to Mammaliicoccus gen. nov., and the formal assignment of Nosocomiicoccus to the family Staphylococcaceae." Int. J. Syst. Evol. Microbiol. (2020) 70(11):5926-5936.
Associate Editor IJSB (1996)
Associate Editor, IJSB. "Notification that new names and new combinations have appeared in volume 46, N° 3, of the IJSB." Int. J. Syst. Bacteriol. (1996) 46:1191.
Cole K et al. (2019), other link:https://mra.asm.org/content/8/17/e00062-19
Cole, K., Foster, D., Russell, J.E., Golubchik, T., Llewelyn, M., Wilson, D.J., Crook, D., and Paul, J., Modernising Medical Microbiology Consortium. "Draft genome sequences of 64 type strains of 50 species and 25 subspecies of the genus Staphylococcus Rosenbach 1884." Microbiol. Resour. Announc. (2019) 8:e00062-19.
Hajek V et al. (1996)
Hajek, V., Meugnier, H., Bes, M., Brun, Y., Fiedler, F., Chmela, Z., Lasne, Y., Fleurette, J., and Freney, J. "Staphylococcus saprophyticus subsp. bovis subsp. nov., isolated from bovine nostrils." Int. J. Syst. Bacteriol. (1996) 46:792-796.
Fairbrother RW (1940)
Fairbrother, R.W. "Coagulase production as a criterion for the classification of the staphylococci." J. Pathol. Bacteriol. (1940) 50:83-88. [No PubMed record available.]
Schleifer KH & Kloos WE (1975), doi:10.1099/00207713-25-1-50
Schleifer, K.H., and Kloos, W.E. "Isolation and characterization of staphylococci from human skin. I. Amended descriptions of Staphylococcus epidermidis and Staphylococcus saprophyticus,and descriptions of three new species: Staphylococcus cohnii, Staphylococcus haem, and Staphylococcus xylosus." Int. J. Syst. Bacteriol. (1975) 25:50-61. [No PubMed record available.]
Shaw C et al. (1951), other link:http://mic.sgmjournals.org/cgi/content/abstract/5/5/1010
Shaw, C., Stitt, J.M., and Cowan, S.T. "Staphylococci and their classification." J. Gen. Microbiol. (1951) 5:1010-1023. [No abstract available.]
Skerman VBD et al. (1980)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors). "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Staphylococcus saprophyticus meta-databases BacDive
GOLD: 7 Organisms organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Staphylococcus saprophyticus culture/stock collections Global Catalogue of Microorganisms
59 records from this provider organism-specific Integrated Microbial Genomes
Staphylococcus saprophyticus taxonomy/phylogenetic Lifemap
Staphylococcus saprophyticus | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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