Taxonomy browser (Burkholderia gladioli)

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Taxonomy browser (Burkholderia gladioli)

Burkholderia gladioli

Taxonomy ID: 28095 (for references in articles please use NCBI:txid28095)

current name

Burkholderia gladioli (Severini 1913) Yabuuchi et al. 1993

basionym:

Pseudomonas gladioli Severini 1913 (Approved Lists 1980), nom. approb.¹⁾

type strain of Pseudomonas gladioli: ATCC :10248, CCUG :1782, CFBP:2427, CIP:105410, DSM :4285, HAMBI:2157, ICMP :3950, IFO :13700, JCM :9311, BCCM/LMG :2216, NBRC :13700, NCCB:38018, NCPPB:1891, NCTC :12378, NRRL :B-793

NCBI BLAST name: b-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:

heterotypic synonym

Pseudomonas antimicrobica Attafuah and Bradbury 1990

type strain of Pseudomonas antimicrobica: BCCM/LMG :18920, NCIMB:9898

heterotypic synonym

Burkholderia cocovenenans (van Damme et al. 1960) Gillis et al. 1995

basionym:

Pseudomonas cocovenenans van Damme et al. 1960 (Approved Lists 1980), nom. approb.²⁾

type strain of Pseudomonas cocovenenans: ATCC :33664, DSM :11318, BCCM/LMG :11626

Lineage( full ): cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia

Entrez records
Database name	Subtree links	Direct links	Links from type
Nucleotide	64,872	61,922	496
Protein	561,569	525,126	-
Structure	7	2	-
Genome	1	1	-
Popset	88	82	-
GEO Datasets	14	14	-
PubMed Central	782	782	-
Gene	37,703	29,945	-
SRA Experiments	338	330	-
Protein Clusters	5,016	5,016	-
Identical Protein Groups	394,997	391,648	-
BioProject	77	64	-
BioSample	627	613	9
Assembly	333	325	-
PubChem BioAssay	2	2	-
Taxonomy	8	1	-

Notes:

1) 'Nom. approb.' (= nomen approbatum, = approved name) refers to a name which is included in the Approved Lists of Bacterial Names.
2) 'Nom. approb.' (= nomen approbatum, = approved name) refers to a name which is included in the Approved Lists of Bacterial Names.

Comments and References:

Anzai Y et al. (2000)

Anzai, Y., Kim, H., Park, J.Y., Wakabayashi, H., and Oyaizu, H. "Phylogenetic affiliation of the pseudomonads based on 16S rRNA sequence." Int. J. Syst. Evol. Microbiol. (2000) 50:1563-1589.

Attafuah A & Bradbury JF (1989)

Attafuah, A., and Bradbury, J.F. "Pseudomonas antimicrobica, a new species strongly antagonistic to plant pathogenes." J. Appl. Bacteriol. (1989) 67:567-573. [No PubMed record available.] [N.B.: article is not available on the journal's web site.]

Coenye T et al. (1999)

Coenye, T., Holmes, B., Kersters, K., Govan, J.R., and Vandamme, P. "Burkholderia cocovenenans (van Damme et al. 1960) Gillis et al. 1995 and Burkholderia vandii Urakami et al. 1994 are junior synonyms of Burkholderia gladioli (Severini 1913) Yabuuchi etal. 1993 and Burkholderia plantarii (Azegami et al. 1987) Urakami et al. 1994, respectively." Int. J. Syst. Bacteriol. (1999) 49:37-42.

Coenye T et al. (2000)

Coenye, T., Gillis, M., and Vandamme, P. "Pseudomonas antimicrobica Attafuah and Bradbury 1990 is a junior synonym of Burkholderia gladioli (Severini 1913) Yabuuchi et al. 1993." Int. J. Syst. Evol. Microbiol. (2000) 50:2135-2139.

Maeda Y et al. (2006)

Maeda, Y., Shinohara, S., Kiba, A., Ohnishi, K., Furuya, N., Kawamura, Y., Ezaki, T., Vandamme, P.A.R., Tsushima, S., and Hikichi, Y. "Phylogenetic study and multiplex PCR-based detection of Burkholderia plantarii, Burkholderia glumae and Burkholderia gladioli using gyrB and rpoD sequences." Int. J. Syst. Evol. Microbiol. (2006) 56:1031-1038. Published online 31 December 2005. doi:10.1099/ijs.0.64184-0

Severini G (1913)

Severini, G. "Una bacteriosi dell' Ixia maculata e del Gladiolus colvilli." Annali di Botanica (Roma) (1913) 11:413-424. [No PubMed record available.]

Skerman VBD et al. (1980) (Pseudomonas cocovenenans)

Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors): "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]

Skerman VBD et al. (1980) (Pseudomonas gladioli)

Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors): "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]

VALIDATION LIST No. 34 (1990) (Pseudomonas antimicrobica)

VALIDATION LIST No. 34. Int. J. Syst. Bacteriol. (1990) 40:320-321.

VALIDATION LIST No. 45 (1993)

VALIDATION LIST No. 45. Int. J. Syst. Bacteriol. (1993) 43:398-399.

van Damme PA et al. (1960)

van Damme, P.A., Johannes, A.G., Cox, H.C., and Berends, W. "On toxoflavin, the yellow poison of Pseudomonas cocovenenans." Rec. Trav. Chim. Pays-Bas (1960) 79:255-267. [No PubMed record available.]

Yabuuchi E et al. (1992)

Yabuuchi, E., Kosako, Y., Oyaizu, H., Yano, I., Hotta, H., Hashimoto, Y., Ezaki, T., and Arakawa, M. "Proposal of Burkholderia gen. nov. and transfer of seven species of the genus Pseudomonas homology group II to the new genus, with the type species Burkholderia cepacia (Palleroni and Holmes 1981) comb. nov." Microbiol. Immunol. (1992) 36:1251-1275. [Erratum: Microbiol. Immunol. (1993) 37:335.]

Young JM et al. (1996) (reference with type strain information)

Young, J.M., Saddler, G.S., Takikawa, Y., De Boer, S.H., Vauterin, L., Gardan, L., Gvozdyak, R.I., and Stead, D.E. "Names of plant pathogenic bacteria 1864-1995." Rev. Plant Pathol. (1996) 75:721-763. [No PubMed record available.]

Zhao N et al. (1995)

Zhao, N., Qu, C., Wang, E., and Chen, W. "Phylogenetic evidence for the transfer of Pseudomonas cocovenenans (van Damme et al. 1960) to the genus Burkholderia as Burkholderia cocovenenans (van Damme et al. 1960) comb. nov." Int. J. Syst. Bacteriol. (1995) 45:600-603.

External Information Resources (NCBI LinkOut)

LinkOut	Subject	LinkOut Provider
Burkholderia gladioli	meta-databases	BacDive
4 records from this provider	organism-specific	BioCyc
Burkholderia cocovenenans (van Damme et al. 1960) Zhao et al., 1995	taxonomy/phylogenetic	Encyclopedia of life
GOLD: 8 Organisms	organism-specific	Genomes On Line Database
Show Biotic Interactions	taxonomy/phylogenetic	Global Biotic Interactions
Burkholderia gladioli	culture/stock collections	Global Catalogue of Microorganisms
16 records from this provider	organism-specific	Integrated Microbial Genomes
Burkholderia gladioli \| SeqCode Registry	taxonomy/phylogenetic	SeqCode Registry
2 records from this provider	taxonomy/phylogenetic	Systematic Mycology and Microbiology Laboratory, Fungal Databases
Wikipedia	taxonomy/phylogenetic	iPhylo

Notes:: Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

Comments and questions to info@ncbi.nlm.nih.gov

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