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Taxonomy browser (Bacteroides hominis)

Bacteroides hominis

Taxonomy ID: 2763023 (for references in articles please use NCBI:txid2763023)
current name
Bacteroides hominis Liu et al. 2022 non Afrizal et al. 2022 Liu et al. 2022 in [Validation List No. 205 (2022)]
type strain of Bacteroides hominis Liu et al. 2022 non Afrizal et al. 2022: personal::NSJ-2, CGMCC:1.31481, KCTC:15964
homotypic synonym:
"Bacteroides hominis" Liu et al. 2021, effective name 1) in [Liu C et al. (2021)]
homotypic synonym:
"Bacteroides fragila" English et al. 2023, effective name, nom. nud. 2),3) in [English J et al. (2023)]
includes:
Bacteroides sp. NSJ-2
vernacular name:
Bacteroides fragilis Division II
NCBI BLAST name: CFB group bacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
"Bacteroides hominis" Afrizal et al. 2022 non Liu et al. 2022 Afrizal et al. 2022, effective name, nom. illeg. 4),5) in [Afrizal A et al. (2022b)]
type strain of "Bacteroides hominis" Afrizal et al. 2022 non Liu et al. 2022: personal::CLA-AA-H207, DSM:112683
includes:
Bacteroides sp. CLA-AA-H207
Lineage( full )
cellular organisms; Bacteria; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides
   Entrez records   
Database name Direct links Links from type
Nucleotide 776 44
Protein 11,867 -
Genome 1 -
SRA Experiments 1 -
Identical Protein Groups 27,229 -
BioProject 4 -
BioSample 13 1
Assembly 13 -
Taxonomy 1 -

Notes:

Comments and References:

Validation List No. 205 (2022), PubMed: abstract
Validation List No. 205: "Valid publication of new names and new combinations effectively published outside the IJSEM." Int. J. Syst. Evol. Microbiol. (2022) 72(5):005331.
Liu C et al. (2021), doi: 10.1186/s40168-021-01064-3, PubMed: abstract
Liu, C., Du, M.-X., Abuduaini, R., Yu, H.-Y., Li, D.-H., Wang, Y.-J., Zhou, N., Jiang, M.-Z., Niu, P.-X., Han, S.-S., Chen, H.-H., Shi, W.-Y., Wu, L., Xin, Y.-H., Ma, J., Zhou, Y., Jiang, C.-Y., Liu, H.-W., and Liu, S.-J. "Enlightening the taxonomy darkness of human gut microbiomes with a cultured biobank." Microbiome (2021) 9(1):119.
English J et al. (2023), PubMed: abstract
English, J., Newberry, F., Hoyles, L., Patrick, S., and Stewart, L. "Genomic analyses of Bacteroides fragilis: subdivisions I and II represent distinct species." J. Med. Microbiol. (2023) 72(11):001768.
Afrizal A et al. (2022b), PubMed: abstract
Afrizal, A., Hitch, T.C.A., Viehof, A., Treichel, N., Riedel, T., Abt, B., Buhl, E.M., Kohlheyer, D., Overmann, J., and Clavel, T. "Anaerobic single-cell dispensing facilitates the cultivation of human gut bacteria." Environ. Microbiol. (2022) 24(9):3861-3881.
Oles RE et al. (2023), other link:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10769428/
Oles, R.E., Terrazas, M.C., Loomis, L.R., Hsu, C.Y., Tribelhorn, C., Ferre, P.B., Ea, A., Bryant, M., Young, J., Carrow, H.C., Sandborn, W.J., Dulai, P., Sivagnanam, M., Pride, D., Knight, R., and Chu, H. "Pangenome comparison of Bacteroides fragilis genomospecies unveil genetic diversity and ecological insights." bioRxiv preprint posted December 21, 2023.

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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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