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Taxonomy browser (Flavobacterium)

Flavobacterium

Taxonomy ID: 237 (for references in articles please use NCBI:txid237)
current name
Flavobacterium Bergey et al. 1923 (Approved Lists 1980) emend. Kuo et al. 2013, nom. approb. 1)
homotypic synonym:
Flavobacterium Bergey et al. 1923 (Approved Lists 1980) emend. Bernardet et al. 1996, nom. approb. 2)
Flavobacterium Bergey et al. 1923 (Approved Lists 1980) emend. Dong et al. 2013, nom. approb. 3)
Flavobacterium Bergey et al. 1923 (Approved Lists 1980) emend. Kang et al. 2013, nom. approb. 4)
NCBI BLAST name: CFB group bacteria
Rank: genus
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Flavobacteriia; Flavobacteriales; Flavobacteriaceae
   Entrez records   
Database name Subtree links Direct links
Nucleotide 186,177 6
Protein 4,186,463 107,927
Structure 90 -
Genome 250 1
Popset 1,022 936
Conserved Domains 4 4
GEO Datasets 96 -
PubMed Central 9,377 9,300
Gene 67,377 -
SRA Experiments 907 59
Protein Clusters 7,156 1,727
Identical Protein Groups 2,866,904 104,863
BioProject 923 41
BioSample 2,674 60
Assembly 1,933 -
PubChem BioAssay 13 4
Taxonomy 4,243 1

Notes:

Comments and References:

Flavobacterium (LPSN link)
Bergey DH et al. (1923)
Bergey, D.H., Harrison, F.C., Breed, R.S., Hammer B.W., and Huntoon, F.M. Bergey's Manual of Determinative Bacteriology, 1st ed. (1923) The Williams and Wilkins Co., Baltimore, pp. 1-442. [No PubMed record available.]
Bernardet JF et al. (1996)
Bernardet, J.F., Segers, P., Vancanneyt, M., Berthe, F., Kersters, K., and Vandamme, P. "Cutting a Gordian knot: emended classification and description of the genus Flavobacterium, emended description of the family Flavobacteriaceae, and proposal of Flavobacterium hydatis nom. nov. (basonym, Cytophaga aquatilis Strohl and Tait 1978)." Int. J. Syst. Bacteriol. (1996) 46(1):128-148. [No PubMed record available.]
Dong K et al. (2013)
Dong, K., Chen, F., Du, Y., and Wang, G. "Flavobacterium enshiense sp. nov., isolated from soil, and emended descriptions of the genus Flavobacterium and Flavobacterium cauense, Flavobacterium saliperosum and Flavobacterium suncheonense." Int. J Syst. Evol. Microbiol. (2013) 63:886-892.
Holmes B & Owen RJ (1982)
Holmes, B., and Owen, R.J. "Flavobacterium breve sp. nov., nom. rev." Int. J. Syst. Bacteriol. (1982) 32:233-234. [No PubMed record available.]
Holmes B & Owen RJ (1979)
Holmes, B., and Owen, R.J. "Proposal that Flavobacterium breve be substituted as the type species of the genus in place of Flavobacterium aquatile and emended description of the genus Flavobacterium: status of the named species of Flavobacterium. Request for an Opinion." Int. J. Syst. Bacteriol. (1979) 29:416-426. [No PubMed record available.]
Judicial Commission ICSB (1986) (Flavobacterium)
Judicial Commission of the International Committee on Systematic Bacteriology "Minutes of the meeting, 6 August 1982, Boston, Massachusetts." Int. J. Syst. Bacteriol. (1986) 36:577-578. (Note: the request of Holmes and Owen (1979) is denied.) [No PubMed record available.]
Kang JY et al. (2013b)
Kang, J.Y., Chun, J., and Jahng, K.Y. "Flavobacterium aciduliphilum sp. nov., isolated from freshwater, and emended description of the genus Flavobacterium." Int. J. Syst. Evol. Microbiol. (2013) 63:1633-1638.
Kuo I et al. (2013)
Kuo, I., Saw, J., Kapan, D.D., Christensen, S., Kaneshiro, K.Y., and Donachie, S.P. "Flavobacterium akiainvivens sp. nov., from decaying wood of Wikstroemia oahuensis, Hawai'i, and emended description of the genus Flavobacterium." Int. J. Syst. Evol. Microbiol. (2013) 63:3280-3286.
Skerman VBD et al. (1980)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors). "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]
Wayne LG (1982)
Wayne, L.G. "Actions of the Judicial Commission of the International Committee on Systematic Bacteriology on requests for opinions published between July 1979 and April 1981." Int. J. Syst. Bacteriol. (1982) 32:464-465. [No PubMed record available.]

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Flavobacterium taxonomy/phylogenetic Encyclopedia of life
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
5 records from this provider organism-specific Integrated Microbial Genomes
Flavobacterium taxonomy/phylogenetic Integrated Taxonomic Information System
Flavobacterium taxonomy/phylogenetic Lifemap
LBSN taxonomy/phylogenetic List of Bacterial names with Standing in Nomenclature
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Flavobacterium Bergey, Harrison, Breed, Hammer & Huntoon, 1923 taxonomy/phylogenetic Ocean Biogeographic Information System
Flavobacterium | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
Flavobacterium taxonomy/phylogenetic TreeBase
Flavobacterium Bergey, Harrison, Breed, Hammer & Huntoon, 1923 taxonomy/phylogenetic World Register of Marine Species
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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