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Taxonomy browser (Thermotogota)

Thermotogota

Taxonomy ID: 200918 (for references in articles please use NCBI:txid200918)
current name
Thermotogota corrig. Reysenbach 2021 in [Oren A & Garrity GM (2021)]
homotypic synonym:
"Thermotogota" Whitman et al. 2018, effective name in [Whitman WB et al. (2018)]
homotypic synonym:
"Thermotogaeota" Oren et al. 2015, effective name 1) in [Oren A et al. (2015)]
equivalent:
Thermotogae
NCBI BLAST name: bacteria
Rank: phylum
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria
   Entrez records   
Database name Subtree links Direct links
Nucleotide 31,502 -
Protein 458,667 -
Structure 1,267 -
Genome 73 -
Popset 117 109
Conserved Domains 58 1
GEO Datasets 164 -
PubMed Central 7,898 87
Gene 44,901 -
SRA Experiments 402 58
Protein Clusters 5,107 -
Identical Protein Groups 468,678 -
BioProject 244 1
BioSample 1,441 58
Assembly 629 -
PubChem BioAssay 42 -
Taxonomy 554 1

Notes:

Comments and References:

Oren A & Garrity GM (2021), PubMed: abstract
Oren, A., and Garrity, G.M. "Valid publication of the names of forty-two phyla of prokaryotes." Int. J. Syst. Evol. Microbiol. (2021) 71(10):005056.
Whitman WB et al. (2018), PubMed: abstract
Whitman, W.B., Oren, A., Chuvochina, M., da Costa, M.S., Garrity, G.M., Rainey, F.A., Rossello-Mora, R., Schink, B., Sutcliffe, I., Trujillo, M.E., and Ventura, S. "Proposal of the suffix -ota to denote phyla. Addendum to 'Proposal to include the rank of phylum in the International Code of Nomenclature of Prokaryotes'." Int. J. Syst. Evol. Microbiol. (2018) 68(3):967-969.
Oren A et al. (2015), PubMed: abstract
Oren, A., da Costa, M.S., Garrity, G.M., Rainey, F.A., Rosselló-Móra, R., Schink, B., Sutcliffe, I., Trujillo, M.E., and Whitman, W.B. "Proposal to include the rank of phylum in the International Code of Nomenclature of Prokaryotes." Int. J. Syst. Evol. Microbiol. (2015) 65(11):4284-4287.
Bhandari V & Gupta RS (2014)
Bhandari, V., and Gupta, R.S. "Molecular signatures for the phylum (class) Thermotogae and a proposal for its division into three orders (Thermotogales, Kosmotogales ord. nov. and Petrotogales ord. nov.) containing four families (Thermotogaceae, Fervidobacteriaceae fam. nov., Kosmotogaceae fam. nov. and Petrotogaceae fam. nov.) and a new genus Pseudothermotoga gen. nov. with five new combinations." Antonie van Leeuwenhoek (2014) 105(1):143-168. [Erratum: Antonie van Leeuwenhoek (2015) 108(5):1281.]
List of Changes in Taxonomic Opinion No. 20 (2014)
"Notification of changes in taxonomic opinion previously published outside the IJSEM." Int. J. Syst. Evol. Microbiol. (2014) 64:2191-2192.
Reysenbach AL (2001j)
Reysenbach, A.-L. "Phylum BII. Thermotogae phy. nov." In: Bergey's Manual of Systematic Bacteriology, 2nd ed., vol. 1 (The Archaea and the deeply branching and phototrophic Bacteria) (D.R. Boone and R.W. Castenholz, eds.), Springer-Verlag, New York (2001). p. 369. [No PubMed record available.]
VALIDATION LIST No. 85 (2002), other link:https://ijs.microbiologyresearch.org/content/journal/ijsem/10.1099/00207713-52-3-685
VALIDATION LIST No. 85. Int. J. Syst. Evol. Microbiol. (2002) 52:685-690. [No abstract available.]

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Thermotogae taxonomy/phylogenetic Encyclopedia of life
2778260950: Thermotoga petrophila TFO organism-specific Integrated Microbial Genomes
Thermotogae taxonomy/phylogenetic Lifemap
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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