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Taxonomy browser (Chloroflexota)

Chloroflexota

Taxonomy ID: 200795 (for references in articles please use NCBI:txid200795)
current name
Chloroflexota corrig. Garrity and Holt 2021 in [Oren A & Garrity GM (2021)]
homotypic synonym:
"Chloroflexi" Garrity and Holt 2001 Garrity and Holt 2021, effective name
"Chloroflexaeota" Oren et al. 2015, effective name, orth. var.
homotypic synonym:
"Chloroflexi" Garrity and Holt 2001 emend. Hugenholtz and Stackebrandt 2004
equivalent:
Chloroflexi
NCBI BLAST name: GNS bacteria
Rank: phylum
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
common name(s) green non-sulfur bacteria, green nonsulfur bacteria
blast name
GNS bacteria
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group
   Entrez records   
Database name Subtree links Direct links
Nucleotide 476,956 -
Protein 2,627,335 29
Structure 127 -
Genome 583 -
Popset 854 806
Conserved Domains 31 5
GEO Datasets 258 -
PubMed Central 11,366 651
Gene 61,950 -
SRA Experiments 1,124 1
Protein Clusters 11,947 -
Identical Protein Groups 12,748,007 29
BioProject 859 1
BioSample 18,086 9
Assembly 9,874 -
Taxonomy 1,727 1

Comments and References:
Oren A & Garrity GM (2021), PubMed: abstract
Oren, A., and Garrity, G.M. "Valid publication of the names of forty-two phyla of prokaryotes." Int. J. Syst. Evol. Microbiol. (2021) 71(10):005056.
Garrity GM & Holt JG (2001l)
Garrity, G.M., and Holt, J.G. "Phylum BVI. Chloroflexi phy. nov." In: Bergey's Manual of Systematic Bacteriology, 2nd ed., vol. 1 (The Archaea and the deeply branching and phototrophic Bacteria) (D.R. Boone and R.W. Castenholz, eds.), Springer-Verlag, New York (2001). p. 427. [No PubMed record available.]
Hugenholtz P & Stackebrandt E (2004)
Hugenholtz, P., and Stackebrandt, E. "Reclassification of Sphaerobacter thermophilus from the subclass Sphaerobacteridae in the phylum Actinobacteria to the class Thermomicrobia (emended description) in the phylum Chloroflexi (emended description)." Int. J. Syst. Evol. Microbiol. (2004) 54:2049-2051.
Oren A et al. (2015)
Oren, A., da Costa, M.S., Garrity, G.M., Rainey, F.A., Rossello-Mora, R., Schink, B., Sutcliffe, I., Trujillo, M.E., and Whitman, W.B. "Proposal to include the rank of phylum in the International Code of Nomenclature of Prokaryotes." Int. J. Syst. Evol. Microbiol. (2015) 65:4284-4287.
VALIDATION LIST No. 85 (2002), other link:https://ijs.microbiologyresearch.org/content/journal/ijsem/10.1099/00207713-52-3-685
VALIDATION LIST No. 85. Int. J. Syst. Evol. Microbiol. (2002) 52:685-690. [No abstract available.]
Wiegand S et al. (2023), other link:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10608941/
Wiegand, S., Sobol, M., Schnepp-Pesch, L.K., Yan, G., Iqbal, S., Vollmers, J., Mùˆller, J.A., and Kaster, A.K. "Taxonomic re-classification and expansion of the phylum Chloroflexota based on over 5000 genomes and metagenome-assembled genomes." Microorganisms (2023) 11(10):2612.
Whitman WB et al. (2018)
Whitman, W.B., Oren, A., Chuvochina, M., da Costa, M.S., Garrity, G.M., Rainey, F.A., Rossello-Mora, R., Schink, B., Sutcliffe, I., Trujillo, M.E., and Ventura, S. "Proposal of the suffix -ota to denote phyla. Addendum to 'Proposal to include the rank of phylum in the International Code of Nomenclature of Prokaryotes'." Int. J. Syst. Evol. Microbiol. (2018) 68(3):967-969.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Chloroflexi taxonomy/phylogenetic Encyclopedia of life
GOLD: Go0111300 organism-specific Genomes On Line Database
88 records from this provider organism-specific Integrated Microbial Genomes
Chloroflexi taxonomy/phylogenetic Lifemap
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Chloroflexota | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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