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Taxonomy browser (Calditrichia)

Calditrichia

Taxonomy ID: 1962850 (for references in articles please use NCBI:txid1962850)
current name
Calditrichia Kublanov et al. 2022 in [Göker M (2022)]
homotypic synonym:
"Calditrichae" Kublanov et al. 2017, effective name in [Kublanov IV et al. (2017)]
homotypic synonym:
"Calditrichia" Bonch-Osmolovskaya and Kublanov 2021 non Cavalier-Smith 2020 Bonch-Osmolovskaya and Kublanov 2021, effective name 1) in [Bonch-Osmolovskaya EA & Kublanov IV (2021)]
"Calditrichia" Cavalier-Smith 2020 non Bonch-Osmolovskaya and Kublanov 2021 Cavalier-Smith 2020, effective name 2) in [Cavalier-Smith T and Chao EE (2020)]
NCBI BLAST name: bacteria
Rank: class
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Calditrichota
   Entrez records   
Database name Subtree links Direct links
Nucleotide 2,510 -
Protein 28,063 -
Structure 1 -
Genome 6 -
Popset 11 10
GEO Datasets 3 -
PubMed Central 204 10
SRA Experiments 14 -
Protein Clusters 1,221 -
Identical Protein Groups 99,197 -
BioProject 12 -
BioSample 173 -
Assembly 124 -
Taxonomy 22 1

Notes:

Comments and References:

Göker M (2022), PubMed: abstract
Göker, M. "Filling the gaps: missing taxon names at the ranks of class, order and family." Int. J. Syst. Evol. Microbiol. (2022) 72(12):005638.
Kublanov IV et al. (2017), doi: 10.3389/fmicb.2017.00195, PubMed: abstract
Kublanov, I.V., Sigalova, O.M., Gavrilov, S.N., Lebedinsky, A.V., Rinke, C., Kovaleva, O., Chernyh, N.A., Ivanova, N., Daum, C., Reddy, T.B.K., Klenk, H.-P., Spring, S., Goker, M., Reva, O.N., Miroshnichenko, M.L., Kyprides, N.C., Woyke, T., Gelfand, M.S., and Bonch-Osmolovskaya, E.A. "Genomic analysis of Caldithrix abyssi, the thermophilic anaerobic bacterium of the novel bacterial phylum Calditrichaeota." Front. Microbiol. (2017) 8:195.
Bonch-Osmolovskaya EA & Kublanov IV (2021)
Bonch-Osmolovskaya, E.A., and Kublanov, I.V. "Calditrichia class. nov." Bergey's Manual of Systematics of Archaea and Bacteria, Online. 29 July 2021, ed. Svetlana N. Dedysh. John Wiley & Sons, Inc. DOI: 10.1002/9781118960608.cbm00084.
Cavalier-Smith T and Chao EE (2020), doi: 10.1007/s00709-019-01442-7, PubMed: abstract
Cavalier-Smith, T., and Chao, E.E. "Multidomain ribosomal protein trees and the planctobacterial origin of neomura (eukaryotes, archaebacteria)." Protoplasma (2020) 257(3):621-753.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Calditrichae taxonomy/phylogenetic Lifemap
Notes:
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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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