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Taxonomy browser (Caldimonas manganoxidans)

Caldimonas manganoxidans

Taxonomy ID: 196015 (for references in articles please use NCBI:txid196015)
current name
Caldimonas manganoxidans Takeda et al. 2002 in [Takeda M et al. (2002)]
type strain of Caldimonas manganoxidans: ATCC:BAA-369, IFO:16448, JCM:10698, NBRC:16448
homotypic synonym:
Caldimonas manganoxidans Takeda et al. 2002 emend. Liu et al. 2022, emended name 1) in [Liu Y et al. (2022b), List of Changes in Taxonomic Opinion No. 37 (2023)]
includes:
Leptothrix sp. HS
NCBI BLAST name: b-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Sphaerotilaceae; Caldimonas
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 313 41 278
Protein 2,477 1,353 -
Genome 1 1 -
Popset 3 3 -
PubMed Central 21 21 -
SRA Experiments 1 1 -
Protein Clusters 1,413 1,413 -
Identical Protein Groups 4,691 3,453 -
BioProject 3 1 -
BioSample 4 3 2
Assembly 2 1 -
Taxonomy 2 1 -

Notes:

Comments and References:
Takeda M et al. (2002), PubMed: abstract
Takeda, M., Kamagata, Y., Ghiorse, W.C., Hanada, S., and Koizumi, J. "Caldimonas manganoxidans gen. nov., sp. nov., a poly(3-hydroxybutyrate)-degrading, manganese-oxidizing thermophile." Int. J. Syst. Evol. Microbiol. (2002) 52(3):895-900.
Liu Y et al. (2022b), PubMed: abstract
Liu, Y., Du, J., Pei, T., Du, H., Feng, G.-D., and Zhu, H. "Genome-based taxonomic classification of the closest-to-Comamonadaceae group supports a new family of Sphaerotilaceae fam. nov. and taxonomic revisions." Syst. Appl. Microbiol. (2022) 45(6):126352.
List of Changes in Taxonomic Opinion No. 37 (2023), PubMed: abstract
Oren, A., and Göker, M. "Notification of changes in taxonomic opinion previously published outside the IJSEM. List of Changes in Taxonomic Opinion no. 37." Int. J. Syst. Evol. Microbiol. 73(1):005696.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Caldimonas manganoxidans meta-databases BacDive
Caldimonas manganoxidans Takeda et al. 2002 taxonomy/phylogenetic Encyclopedia of life
Caldimonas manganoxidans culture/stock collections Global Catalogue of Microorganisms
Caldimonas manganoxidans (T) | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
Notes:
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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