Taxonomy browser (Streptomyces griseus)

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Taxonomy browser (Streptomyces griseus)

Streptomyces griseus

Taxonomy ID: 1911 (for references in articles please use NCBI:txid1911)

current name

Streptomyces griseus (Krainsky 1914) Waksman and Henrici 1948 (Approved Lists 1980) in [Skerman VBD et al. (1980)]

type strain of Streptomyces griseus: CGMCC :4.1419, ATCC :23345, ATCC :23921, CBS :905.68, BCRC :13478, CCT:4836, CCUG :11104, CECT:3330, CFBP:4546, CIP:105124, DSM :40236, HAMBI:2315, IFO :12875, NBRC :12875, IFO :15744, NBRC :15744, JCM :4047, JCM :4644, KCTC :9080, KCTC :9135, BCCM/LMG :19302, NCIMB:13023, NCTC :13033, NRRL :B-2682, NRRL-ISP:5236, PCM:2331, RIA:1176, VKM:Ac:800, ISP:5236, KACC:20084

basionym:

"Actinomyces griseus" Krainsky 1914, effective name¹⁾

homotypic synonym:

Streptomyces griseus (Krainsky 1914) Waksman and Henrici 1948 (Approved Lists 1980) emend. Liu et al. 2005, emended name²⁾

Streptomyces griseus (Krainsky 1914) Waksman and Henrici 1948 emend. Nouioui et al. 2018, emended name³⁾ in [Nouioui I et al. (2018c)]

includes:

Streptomyces sp. AP19-1

Streptomyces sp. AP19-2

Streptomyces sp. DSM 40932

Streptomyces sp. WXC19-1

NCBI BLAST name: high G+C Gram-positive bacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:

heterotypic synonym

Streptomyces fimicarius (Duché 1934) Waksman and Henrici 1948 (Approved Lists 1980) in [Skerman VBD et al. (1980), Shirling EB & Gottlieb D (1969)]

type strain of Streptomyces fimicarius: CGMCC :4.1629, ATCC :25449, CBS :420.34, CBS :682.69, BCRC :12245, DSM :40322, IFO :13037, NBRC :13037, JCM :4472, NRRL-ISP:5322, RIA:1229, VKM:Ac:1724, ISP:5322

basionym:

"Actinomyces fimicarius" Duché 1934, effective name

heterotypic synonym

Streptomyces setonii (Millard and Burr 1926) Waksman 1953 (Approved Lists 1980) in [Skerman VBD et al. (1980)]

type strain of Streptomyces setonii: ATCC :25497, CGMCC :4.1367, CBS :105.27, CBS :957.69, CFBP:4549, CIP:105279, DSM :40395, ICMP :12543, IFO :13085, NBRC :13085, JCM :4226, JCM :4516, KCTC :9144, NRRL :B-2555, NRRL-ISP:5395, RIA:1277

basionym:

"Actinomyces setonii" Millard and Burr 1926, effective name⁴⁾

homotypic synonym:

Streptomyces setonii (Millard and Burr 1926) Waksman 1953 (Approved Lists 1980) emend. Kim et al. 2012, emended name⁵⁾

heterotypic synonym

Streptomyces cavourensis subsp. washingtonensis Skarbek and Brady 1978 (Approved Lists) in [Skerman VBD et al. (1980)]

type strain of Streptomyces cavourensis subsp. washingtonensis: NRRL :B-8030, ATCC :27732, NBRC :15391, IFO :15391, KCC:S-0967, CGMCC :4.1635, DSM :41423, JCM :4967, personal::AUW-83

Lineage( full ): cellular organisms; Bacteria; Bacillati; Actinomycetota; Actinomycetes; Kitasatosporales; Streptomycetaceae; Streptomyces; Streptomyces griseus group; Streptomyces griseus subgroup

Entrez records
Database name	Subtree links	Direct links	Links from type
Nucleotide	31,566	21,910	1,804
Protein	260,864	225,217	-
Structure	83	78	-
Genome	1	1	-
Popset	105	105	-
GEO Datasets	74	43	-
PubMed Central	3,446	3,433	-
Gene	22,371	14,215	-
SRA Experiments	80	51	-
Protein Clusters	2,993	2,993	-
Identical Protein Groups	250,884	220,541	-
BioProject	43	35	-
BioSample	389	345	9
Assembly	161	138	-
PubChem BioAssay	28	28	-
Taxonomy	6	1	-

Notes:

1) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
2) emend. (emendavit): Used when the alteration of the diagnostic characters or of the circumscription of a taxon modifies the nature of the taxon.
3) emend. (emendavit): Used when the alteration of the diagnostic characters or of the circumscription of a taxon modifies the nature of the taxon.
4) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
5) emend. (emendavit): Used when the alteration of the diagnostic characters or of the circumscription of a taxon modifies the nature of the taxon.

Comments and References:

Skerman VBD et al. (1980)

Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. "Approved Lists of Bacterial Names." Intl. J. Syst. Bacteriol. (1980) 30(1):225-420.

Nouioui I et al. (2018c), doi: 10.3389/fmicb.2018.02007, PubMed: abstract

Nouioui, I., Carro, L., García-López, M., Meier-Kolthoff, J.P., Woyke, T., Kyrpides, N.C., Pukall, R., Klenk, H.-P., Goodfellow, M., and Göker M. "Genome-based taxonomic classification of the phylum Actinobacteria." Front. Microbiol. (2018) 9:2007.

Shirling EB & Gottlieb D (1969)

Shirling, E.B., and Gottlieb, D. "Cooperative description of type cultures of Streptomyces. IV. Species descriptions from the second, third and fourth studies." Int. J. Syst. Bacteriol. (1969) 19(4):391-512.

Gordan RE & Horan AC (1968)

Gordon, R.E., and Horan, A.C. "A piecemeal description of Streptomyces griseus (Krainsky) Waksman and Henrici." J. Gen. Microbiol. (1968) 50:223-233. [No abstract available.]

Guo Y et al. (2008)

Guo, Y., Zheng, W., Rong, X., and Huang, Y. "A multilocus phylogeny of the Streptomyces griseus 16S rRNA gene clade: use of multilocus sequence analysis for streptomycete systematics." Int. J. Syst. Evol. Microbiol. (2008) 58:149-159.

Kim KO et al. (2012)

Kim, K.-O., Shin, K.-S., Kim, M.N., Shin, K.-S., Labeda, D.P., Han, J.-H., and Kim, S.B. "Reassessment of the status of Streptomyces setonii and reclassification of Streptomyces fimicarius as a later synonym of Streptomyces setonii and Streptomyces albovinaceus as a later synonym of Streptomyces globisporus based on combined 16S rRNA/gyrB gene sequence analysis." Int. J. Syst. Evol. Microbiol. (2012) 62:2978-2985.

Krainsky A (1994)

Krainsky, A. "Die Aktinomyceten und ihren Bedeutung in der Natur." Zentralbl. Bakteriol. Parasitenkd. Infektionskr. Hyg. Abt. II (1914) 41:649-688. [No PubMed record available.]

Liu Z et al. (2005b)

Liu, Z., Shi, Y., Zhang, Y., Zhou, Z., Lu, Z., Li, W., Huang, Y., Rodriguez, C., and Goodfellow, M. "Classification of Streptomyces griseus (Krainsky 1914) Waksman and Henrici 1948 and related species and the transfer of 'Microstreptospora cinerea' to the genus Streptomyces as Streptomyces yanii sp. nov." Int. J. Syst. Evol. Microbiol. (2005) 55:1605-1610. Published online 1 March 2005. doi:10.1099/ijs.0.63654-0

Millard WA & Burr S (1926)

Millard, W.A., and Burr, S. "A study of twenty-four strains of Actinomyces and their relation to types of common scab of potato." Ann. Appl. Biol. (1926) 13:580-644. [No PubMed record available.]

Rong X & Huang Y (2010)

Rong, X., and Huang, Y. "Taxonomic evaluation of the Streptomyces griseus clade using multilocus sequence analysis and DNA-DNA hybridization, with proposal to combine 29 species and three subspecies as 11 genomic species." Int. J. Syst. Evol. Microbiol. (2010) 60:696-703. [N.B.: the authors incorrectly state that Streptomyces californicus is a later heterotypic synonym of Streptomyces puniceus. In fact, the reverse is true.]

Skarbek JD & Brady LR (1978)

Skarbek, J.D., and Brady, L.R. "Streptomyces cavourensis sp. nov. (nom. rev.) and Streptomyces cavourensis subsp. washingtonensis subsp. nov., a chromomycin subspecies." Int. J. Syst. Bacteriol. (1978) 28:45-53. [No PubMed record available.]

Waksman SA & Henrici AT (1948b)

Waksman, S.A., and Henrici, A.T. "Family III. Streptomycetaceae Waksman and Henrici." IN: Breed, Murray, and Hitchens (Eds.), Bergey's Manual of Determinative Bacteriology, 6th Ed. (1948). The Williams and Wilkins Co., Balitmore. pp. 929-980. [No PubMed record available.]

Waksman SA & Lechevalier HA (1953)

Waksman, S.A., and Lechevalier, H.A. (Eds.): Guide to the Classification and Identification of the Actinomycetes and Their Antibiotics. The Williams & Wilkins Co., Baltimore, 1953, pp. 1-246. [No PubMed record available.]

Wu X et al. (2008)

Wu, X., Wen, Y., Qian, C., Li, O., Fang, H., and Chen, W. "Taxonomic study of a chromomycin-producing strain and reclassification of Streptomyces cavourensis subsp. washingtonensis as a later synonym of Streptomyces griseus." Int. J. Syst. Evol. Microbiol. (2008) 58:2783-2787.

Young JM et al. (1996) (reference with type strain information)

Young, J.M., Saddler, G.S., Takikawa, Y., De Boer, S.H., Vauterin, L., Gardan, L., Gvozdyak, R.I., and Stead, D.E. "Names of plant pathogenic bacteria 1864-1995." Rev. Plant Pathol. (1996) 75:721-763. [No PubMed record available.]

External Information Resources (NCBI LinkOut)

LinkOut	Subject	LinkOut Provider
Streptomyces griseus	meta-databases	BacDive
GOLD: 4 Organisms	organism-specific	Genomes On Line Database
Show Biotic Interactions	taxonomy/phylogenetic	Global Biotic Interactions
Streptomyces griseus	culture/stock collections	Global Catalogue of Microorganisms
9 records from this provider	organism-specific	Integrated Microbial Genomes
Streptomyces griseus \| SeqCode Registry	taxonomy/phylogenetic	SeqCode Registry
Wikipedia	taxonomy/phylogenetic	iPhylo

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

Comments and questions to info@ncbi.nlm.nih.gov