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Taxonomy browser (Collinsella intestinalis)

Collinsella intestinalis

Taxonomy ID: 147207 (for references in articles please use NCBI:txid147207)
current name
Collinsella intestinalis Kageyama and Benno 2000
type strain of Collinsella intestinalis: CCUG:45296, CIP:106914, DSM:13280, JCM:10643, personal::RCA56-68
homotypic synonym:
Collinsella intestinalis Kageyama and Benno 2000 emend. Nouioui et al. 2018, emended name 1) in [Nouioui I et al. (2018c)]
includes:
Collinsella sp. RCA56-68
Collinsella sp. RCA56-80
NCBI BLAST name: actinobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Collinsella group 2
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Actinomycetota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 3,519 3,453 67
Protein 25,472 23,688 -
Genome 1 1 -
Popset 1 1 -
PubMed Central 65 65 -
Gene 1,591 1,591 -
SRA Experiments 20 17 -
Protein Clusters 1,039 1,039 -
Identical Protein Groups 27,353 26,721 -
BioProject 21 20 -
BioSample 159 157 -
Assembly 35 34 -
Taxonomy 2 1 -

Notes:

Comments and References:
Nouioui I et al. (2018c), doi: 10.3389/fmicb.2018.02007, PubMed: abstract
Nouioui, I., Carro, L., García-López, M., Meier-Kolthoff, J.P., Woyke, T., Kyrpides, N.C., Pukall, R., Klenk, H.-P., Goodfellow, M., and Göker M. "Genome-based taxonomic classification of the phylum Actinobacteria." Front. Microbiol. (2018) 9:2007.
Kageyama A & Benno Y (2000a)
Kageyama, A., and Benno, Y. "Emendation of genus Collinsella and proposal of Collinsella stercoris sp. nov. and Collinsella intestinalis sp. nov." Int. J. Syst. Evol. Microbiol. (2000) 50:1767-1774.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Collinsella intestinalis meta-databases BacDive
Collinsella intestinalis Kageyama and Benno 2000 taxonomy/phylogenetic Encyclopedia of life
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Collinsella intestinalis culture/stock collections Global Catalogue of Microorganisms
2 records from provider organism-specific Integrated Microbial Genomes
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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