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Taxonomy browser (Psychrobacter pacificensis)

Psychrobacter pacificensis

Taxonomy ID: 112002 (for references in articles please use NCBI:txid112002)
current name
Psychrobacter pacificensis Maruyama et al. 2000 in [Maruyama A et al. (2000)]
type strain of Psychrobacter pacificensis: IFO:16270, NBRC:103191, NIBH P2K6, DSM:23406
homotypic synonym:
Psychrobacter pacificensis Maruyama et al. 2000 emend. Kaur et al. 2023, emended name 1) in [Kaur J et al. (2023), List of Changes in Taxonomic Opinion No. 39 (2024)]
includes:
Psychrobacter sp. NIBH P2J13
Psychrobacter sp. NIBH P2J2
Psychrobacter sp. NIBH P2J3
Psychrobacter sp. NIBH P2K17
Psychrobacter sp. NIBH P2K18
Psychrobacter sp. NIBH P2K6
NCBI BLAST name: g-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Psychrobacter oceani Matsuyama et al. 2015 in [Matsuyama H et al. (2015)]
type strain of Psychrobacter oceani: personal::4k5, JCM:30235, NCIMB:14948
includes:
Psychrobacter sp. 4k5
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Moraxellales; Moraxellaceae; Psychrobacter
   Entrez records   
Database name Direct links Links from type
Nucleotide 4,828 127
Protein 11,550 -
Genome 1 -
Popset 10 -
PubMed Central 40 -
Gene 2,710 -
SRA Experiments 11 -
Identical Protein Groups 10,439 -
BioProject 12 -
BioSample 43 5
Assembly 38 -
Taxonomy 1 -

Notes:

Comments and References:
Maruyama A et al. (2000), PubMed: abstract
Maruyama, A., Honda, D., Yamamoto, H., Kitamura, K., and Higashihara, T. "Phylogenetic analysis of psychrotrophic bacteria isolated from the Japan Trench, including a description of the deep-sea species Psychrobacter pacificensis sp. nov." Int. J. Syst. Evol. Microbiol. (2000) 50(2):835-846.
Kaur J et al. (2023), PubMed: abstract
Kaur, J., Sood, U., Talwar, C., Whitman, W.B., and Lal, R. "Phylogenomics-based reclassifications in the genus Psychrobacter including emended descriptions of Psychrobacter pacificensis, Psychrobacter proteolyticus and Psychrobacter submarinus." Antonie van Leeuwenhoek (2023) 116(11):1113-1121.
List of Changes in Taxonomic Opinion No. 39 (2024), PubMed: abstract
Oren, A., and Göker, M. "Notification of changes in taxonomic opinion previously published outside the IJSEM. List of Changes in Taxonomic Opinion no. 39." Int. J. Syst. Evol. Microbiol. (2024) 74(1):006145.
Matsuyama H et al. (2015), PubMed: abstract
Matsuyama, H., Minami, H., Sakaki, T., Kasahara, H., Watanabe, A., Onoda, T., Hirota, K., and Yumoto, I. "Psychrobacter oceani sp. nov., isolated from marine sediment." Int. J. Syst. Evol. Microbiol. (2015) 65(5):1450-1455.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Psychrobacter pacificensis meta-databases BacDive
2 records from this provider organism-specific BioCyc
Psychrobacter pacificensis Maruyama et al. 2000 taxonomy/phylogenetic Encyclopedia of life
GOLD: 2 Organisms organism-specific Genomes On Line Database
Psychrobacter pacificensis culture/stock collections Global Catalogue of Microorganisms
2599185216: Psychrobacter pacificensis DSM 23406 organism-specific Integrated Microbial Genomes
Psychrobacter pacificensis Maruyama, Honda, Yamamoto, Kitamura & Higashihara, 2000 taxonomy/phylogenetic Ocean Biogeographic Information System
Psychrobacter pacificensis | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
Notes:
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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