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Taxonomy browser (Mesangiospermae)

Mesangiospermae

Taxonomy ID: 1437183 (for references in articles please use NCBI:txid1437183)
current name
Mesangiospermae M.J.Donoghue, J.A.Doyle & P.D.Cantino, 2007 in [Cantino PD et al. (2007)]
NCBI BLAST name: flowering plants
Rank: clade
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 1 (Standard)
Plastid genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida
   Entrez records   
Database name Subtree links Direct links
Nucleotide 91,276,178 1
Protein 35,216,950 -
Structure 6,963 -
Genome 1,723 -
Popset 52,226 1,873
Conserved Domains 688 124
GEO Datasets 255,908 -
PubMed Central 820,800 77
Gene 9,871,116 -
HomoloGene 11,871 -
SRA Experiments 2,030,293 -
GEO Profiles 3,534,131 -
Protein Clusters 61,363 -
Identical Protein Groups 25,097,602 -
BioProject 118,144 5
BioSample 1,934,162 -
Assembly 5,206 -
PubChem BioAssay 10,644 -
Taxonomy 230,877 1

Comments and References:
Cantino PD et al. (2007)
Cantino PD, Doyle JA, Graham SW, Judd WS, Olmstead RG, Soltis DE, Soltis PS, Donoghue MJ. 2007. Towards a phylogenetic nomenclature of Tracheophyta. Taxon 56(3):822-846.
APG IV (2016), doi:10.1111/boj.12385
The Angiosperm Phylogeny Group. 2016. An update of the Angiosperm Phylogeny Group classification of the orders and families of flowering plants: APG IV. Botanical Journal of the Linnean Society 181: 1-20.
Zeng L et al. 2014, doi:10.1038/ncomms5956
Zeng L, Zhang Q, Sun R, Kong H, Zhang N, Ma H. 2014. Resolution of deep angiosperm phylogeny using conserved nuclear genes and estimates of divergence times. Nature Communications 5: 4956.
Ruhfel BR et al. 2014, doi:10.1186/1471-2148-14-23
Ruhfel BR, Gitzendanner MA, Soltis PS, Soltis DE and Burleigh HG. 2014. From algae to angiosperms-inferring the phylogeny of green plants (Viridiplantae) from 360 plastid genomes. BMC Evolutionary Biology 14:23
Cantino PD et al. 2007, doi:10.2307/25065864
Cantino PD, Doyle JA, Graham SW, Judd WS, Olmstead RG, Soltis DE, Soltis PS and Donoghue MJ. 2007. Towards a phylogenetic nomenclature of Tracheophyta. Taxon 56(3): 822-846.
Qiu Y-L et al. 2005, doi:10.1086/431800
Qiu Y-L, Dombrovska O, Lee J, Li L, Whitlock BA, Bernasconi-Quadroni F, Rest JS, Davis CC, Borsch T, Hilu KW, Renner SS, Soltis DE, Soltis PS, Zanis MJ, Cannone JJ, Gutell RR, Powell M, Savolainen V, Chatrou LW & Chase MW. 2005. Phylogenetic analyses of basal angiosperms based on nine plastid, mitochondrial, and nuclear genes. International Journal of Plant Sciences 166: 815-842.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Mesangiospermae taxonomy/phylogenetic Lifemap
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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