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Taxonomy browser (Lysobacterales)

Lysobacterales

Taxonomy ID: 135614 (for references in articles please use NCBI:txid135614)
current name
Lysobacterales Christensen and Cook 1978 (Approved Lists 1980) in [Skerman VBD et al. (1980)]
homotypic synonym:
Lysobacterales Christensen and Cook 1978 (Approved Lists 1980) emend. Naushad et al. 2015, emended name 1)
NCBI BLAST name: g-proteobacteria
Rank: order
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Xanthomonadales Saddler and Bradbury 2005, nom. illeg. 2) in [Validation List No. 106 (2005)]
homotypic synonym:
Xanthomonadales Saddler and Bradbury 2005 emend. Bansal et al. 2023, emended name 3) in [Bansal K et al. (2023)]
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria
   Entrez records   
Database name Subtree links Direct links
Nucleotide 1,606,853 -
Protein 14,927,103 638
Structure 650 -
Genome 357 -
Popset 3,545 2,552
Conserved Domains 78 2
GEO Datasets 965 -
PubMed Central 36,048 1,447
Gene 494,052 -
SRA Experiments 13,750 10
Protein Clusters 16,853 1
Identical Protein Groups 8,055,234 638
BioProject 3,189 4
BioSample 18,772 15
Assembly 10,778 -
PubChem BioAssay 493 -
Taxonomy 7,040 1

Notes:

Comments and References:

Skerman VBD et al. (1980)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. "Approved Lists of Bacterial Names." Intl. J. Syst. Bacteriol. (1980) 30(1):225-420.
Validation List No. 106 (2005)
Validation of publication of new names and new combinations previously effectively published outside the IJSEM. International Journal of Systematic and Evolutionary Microbiology 55(6):2235-2238.
Bansal K et al. (2023)
Bansal, K., Kumar, S., Singh, A., Chaudhary, A., and Patil, P.B. "Redefining the taxonomic boundaries of genus Xanthomonas." Taxonomy (2023) 3(4):452-465.
Christensen P & Cook FD (1978)
Christensen, P., and Cook, F.D. "Lysobacter, a new genus of nonfruiting, gliding bacteria with a high base ratio." Int. J. Syst. Bacteriol. (1978) 28:367-393. [No PubMed record available.]
Cutino-Jimenez AM et al. (2010)
Cutino-Jimenez, A.M., Martins-Pinheiro, M., Lima, W.C., MartIn-Tornet, A., Morales, O.G., and Menck, C.F. "Evolutionary placement of Xanthomonadales based on conserved protein signature sequences." Mol. Phylogenet. Evol. (2010) 54:524-534.
List of Changes in Taxonomic Opinion No. 22 (2015)
"Notification of changes in taxonomic opinion previously published outside the IJSEM." Int. J. Syst. Evol. Microbiol. (2015) 65:2028-2029.
Naushad S et al. (2015)
Naushad, S., Adeolu, M., Wong, S., Sohail, M., Schellhorn, H.E., and Gupta, R.S. "A phylogenomic and molecular marker based taxonomic framework for the order Xanthomonadales: proposal to transfer the families Algiphilaceae and Solimonadaceae to the order Nevskiales ord. nov. and to create a new family within the order Xanthomonadales, the family Rhodanobacteraceae fam. nov., containing the genus Rhodanobacter and its closest relatives." Antonie van Leeuwenhoek (2015) 107(2):467-485.
Saddler GS & Bradbury JF (2005)
Saddler, G.S., and Bradbury, J.F. "Order III. Xanthomonadales ord. nov." In: D.J. Brenner, N.R. Krieg, J.T. Staley and G. M. Garrity (eds), Bergeys Manual of Systematic Bacteriology, second edition, vol. 2 (The Proteobacteria), part B (The Gammaproteobacteria), Springer, New York, 2005, p. 63. [No PubMed record available.]
Tindall BJ (2014), doi:10.1099/ijs.0.057158-0
Tindall, B.J. "The family name Solimonadaceae Losey et al. 2013 is illegitimate, proposals to create the names 'Sinobacter soli' comb. nov. and 'Sinobacter variicoloris' contravene the Code, the family name Xanthomonadaceae Saddler and Bradbury 2005 and the order name Xanthomonadales Saddler and Bradbury 2005 are illegitimate and notes on the application of the family names Solibacteraceae Zhou et al. 2008, Nevskiaceae Henrici and Johnson 1935 (Approved Lists 1980) and Lysobacteraceae Christensen and Cook 1978 (Approved Lists 1980) and order name Lysobacteriales Christensen and Cook 1978 (Approved Lists 1980) with respect to the classification of the corresponding type genera Solibacter Zhou et al. 2008, Nevskia Famintzin 1892 (Approved Lists 1980) and Lysobacter Christensen and Cook 1978 (Approved Lists 1980) and importance of accurately expressing the link between a taxonomic name, its authors and the corresponding description/circumscription/emendation." Int. J. Syst. Evol. Microbiol. (2014) 64(1):293-297.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Xanthomonadales taxonomy/phylogenetic Encyclopedia of life
2713896723: Unclassified Xanthomonadales PNA_bin11 organism-specific Integrated Microbial Genomes
Xanthomonadales taxonomy/phylogenetic Lifemap
LBSN taxonomy/phylogenetic List of Bacterial names with Standing in Nomenclature
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Xanthomonadales Saddler & Bradbury, 2005 taxonomy/phylogenetic Ocean Biogeographic Information System
2 records from this provider taxonomy/phylogenetic SeqCode Registry
Xanthomonadales Saddler & Bradbury, 2005 taxonomy/phylogenetic World Register of Marine Species
Notes:
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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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