Taxonomy browser (Nodosilinea nodulosa PCC 7104)

Entrez records
Database name	Direct links
Nucleotide	83
Protein	1,839
Structure	1
Genome	1
Popset	6
PubMed Central	2
SRA Experiments	3
Identical Protein Groups	6,110
BioProject	2
BioSample	3
Assembly	1
Taxonomy	1

Notes:

1) 'Nom. inval.' (= nomen invalidum, = invalid name) refers to a name not published in accordance with rules enumerated in the International Code for algae, fungi and plants.
2) Co-identical strain: these strains are derived from the same original isolate

Comments and References:

Walter JM et al. (2017b), doi: 10.3389/fmicb.2017.02132, PubMed: abstract

Walter, J.M., Coutinho, F.H., Dutilh, B.E., Swings, J., Thompson, F.L., and Thompson, C.C. "Ecogenomics and taxonomy of Cyanobacteria phylum." Front. Microbiol. (2017) 8:2132.

genome sequence

Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.

PCC 7104

Reference strain for Leptolyngbya Cluster 3 (Castenholz RW et al., 2001; Rippka R & Herdman H, 1992). Proposed type strain of Arhinema longislandicus (Walter JM et al., 2017b).

Castenholz RW et al. (2001)

Castenholz, R.W., Rippka, R., Herdman,, M., and Wilmotte, A. "Form-genus V. Leptolngbya Anagnostidis and Komarek 1988." In: Bergey's Manual of Systematic Bacteriology, 2nd ed., vol. 1 (The Archaea and the deeply branching and phototrophic Bacteria) (D.R. Boone and R.W. Castenholz, eds.), Springer-Verlag, New York (2001). pp. 544-545. [No PubMed record available.]

Perkerson RB III et al. (2011), doi:10.1111/j.1529-8817.2011.01077.x

Perkerson, R.B. III, Johansen, J.R., Kovácik, L., Brand, J., Kaštovský, J., and Casamatta, D.A. "A unique pseudanabaenalean (Cyanobacteria) genus Nodosilinea gen. nov. based on morphological and molecular data." J. Phycol. (2011) 47(6):1397-1412.

Rippka R & Herdman H (1992)

Rippka, R., and Herdmann, H.: Pasteur Culture Collection of Cyanobacterial Strains in Axenic Culture. Cyanobacteria Catalogue & Taxonomic Handbook. Vol. I. Catalogue of Strains 1992/1993. Paris: Institut Pasteur, 1992. [No PubMed record available.]

Shih PM et al. (2013), doi:10.1073/pnas.1217107110

Shih, P.M., Wu, D., Latifi, A., Axen, S.D., Fewer, D.P., Talla, E., Calteau, A., Cai, F., Tandeau de Marsac, N., Rippka, R., Herdman, M., Sivonen, K., Coursin, T., Laurent, T., Goodwin, L., Nolan, M., Davenport, K.W., Han, C.S., Rubin, E.M., Eisen, J.A., Woyke, T., Gugger, M., and Kerfeld, C.A. "Improving the coverage of the cyanobacterial phylum using diversity-driven genome sequencing." Proc. Natl. Acad. Sci. USA (2013) 110:1053-1058.

External Information Resources (NCBI LinkOut)

LinkOut	Subject	LinkOut Provider
2 records from this provider	organism-specific	BioCyc
GOLD: Go0006602	organism-specific	Genomes On Line Database
2509601026: Nodosilinea nodulosa PCC 7104	organism-specific	Integrated Microbial Genomes

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A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

Comments and questions to info@ncbi.nlm.nih.gov

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