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Taxonomy browser (Sphingopyxis alaskensis)

Sphingopyxis alaskensis

Taxonomy ID: 117207 (for references in articles please use NCBI:txid117207)
current name
Sphingopyxis alaskensis (Vancanneyt et al. 2001) Godoy et al. 2003
basionym:
Sphingomonas alaskensis Vancanneyt et al. 2001
type strain of Sphingomonas alaskensis: CCUG:45028, CIP:106977, DSM:13593, BCCM/LMG:18877, personal::RB2256
equivalent:
Sphingomonas alaska
NCBI BLAST name: a-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 208 126 18
Protein 7,226 3,705 -
Structure 8 - -
Genome 1 1 -
Popset 5 5 -
PubMed Central 220 220 -
Gene 3,262 1 -
SRA Experiments 15 12 -
Protein Clusters 2,255 2,255 -
Identical Protein Groups 4,746 4,051 -
BioProject 8 7 -
BioSample 21 19 1
Assembly 4 3 -
Taxonomy 2 1 -

Comments and References:

Vancanneyt M et al. (2001a)
Vancanneyt, M., Schut, F., Snauwaert, C., Goris, J., Swings, J., and Gottschal, J.C. "Sphingomonas alaskensis sp. nov., a dominant bacterium from a marine oligotrophic environment." Int. J. Syst. Evol. Microbiol. (2001) 51:73-79.
Yabuuchi E et al. (2002)
Yabuuchi, E., Kosako, Y., Fujiwara, N., Naka, T., Matsunaga, I., Ogura H., and Kobayashi, K. "Emendation of the genus Sphingomonas Yabuuchi et al. 1990 and junior objective synonymy of the species of three genera, Sphingobium, Novosphingobium and Sphingopyxis, in conjunction with Blastomonas ursincola." Int. J. Syst. Evol. Microbiol. (2002) 52:1485-1496. (Note: Yabuuchi et al. (2002) believe that current evidence does not warrant separate genus status for species assigned to the genera Sphingobium, Sphingopyxis, or Novosphingobium by Takeuchi et al. (2001).)
Godoy F et al. (2003)
Godoy, F., Vancanneyt, M., Martínez, M., Steinbuchel, A., Swings, J., and Rehm, B.H.A. "Sphingopyxis chilensis sp. nov., a chlorophenol-degrading bacterium which accumulates polyhydroxyalkanoate, and transfer of Sphingomonas alaskensis to Sphingopyxis alaskensis comb. nov." Int. J. Syst. Evol. Microbiol. (2003) 53:473-477. Published online 19 September 2002. DOI 10.1099/ijs.0.02375-0
Takeuchi M et al. (2001)
Takeuchi, M., Hamana, K., and Hiraishi, A. "Proposal of the genus Sphingomonas sensu stricto and three new genera, Sphingobium, Novosphingobium and Sphingopyxis, on the basis of phylogenetic and chemotaxonomic analyses." Int. J. Syst. Evol. Microbiol. (2001) 51:1405-1417.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Sphingopyxis alaskensis meta-databases BacDive
Sphingopyxis alaskensis (Vancanneyt et al. 2001) Godoy et al. 2003 taxonomy/phylogenetic Encyclopedia of life
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Sphingopyxis alaskensis culture/stock collections Global Catalogue of Microorganisms
Sphingopyxis alaskensis Vancanneyt, Schut, Snauwaert, Goris, Swings & Gottschal, 2001 taxonomy/phylogenetic Ocean Biogeographic Information System
Sphingopyxis alaskensis | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
Sphingopyxis alaskensis Vancanneyt, Schut, Snauwaert, Goris, Swings & Gottschal, 2001 taxonomy/phylogenetic World Register of Marine Species
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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