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Taxonomy browser (Lacticaseibacillus paracasei ATCC 334)

Lacticaseibacillus paracasei ATCC 334

Taxonomy ID: 321967 (for references in articles please use NCBI:txid321967)
current name
Lacticaseibacillus paracasei ATCC 334
homotypic synonym:
Lactobacillus paracasei ATCC 334
equivalent:
Lactobacillus casei ATCC 334
Lactobacillus casei str. ATCC 334
Lactobacillus casei strain ATCC 334
NCBI BLAST name: firmicutes
Rank: strain
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Lacticaseibacillus; Lacticaseibacillus paracasei
   Entrez records   
Database name Direct links
Nucleotide 58
Protein 3,893
Structure 10
Genome 1
Popset 12
GEO Datasets 26
PubMed Central 1
Gene 2,930
SRA Experiments 4
Identical Protein Groups 2,901
BioProject 4
BioSample 3
Assembly 1
PubChem BioAssay 1
Taxonomy 1

Comments and References:

genome sequence
Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.
JUDICIAL OPINION 82 (2008)
Judicial Commission. "The type strain of Lactobacillus casei is ATCC 393, ATCC 334 cannot serve as the type because it represents a different taxon, the name Lactobacillus paracasei and its subspecies names are not rejected and the revival of the name 'Lactobacillus zeae' contravenes Rules 51b (1) and (2) of the International Code of Nomenclature of Bacteria. Opinion 82." Int. J. Syst. Evol. Microbiol. (2008) 58(7):1764-1765.
Makarova K et al. (2006)
Makarova, K., Slesarev, A., Wolf, Y., Sorokin, A., Mirkin, B., Koonin, E., Pavlov, A., Pavlova, N., Karamychev, V., Polouchine, N., Shakhova, V., Grigoriev, I., Lou, Y., Rohksar, D., Lucas, S., Huang, K., Goodstein, D.M., Hawkins, T., Plengvidhya, V., Welker, D., Hughes, J., Goh, Y., Benson, A., Baldwin, K., Lee, J.H., Diaz-Muniz, I., Dosti, B., Smeianov, V., Wechter, W., Barabote, R., Lorca, G., Altermann, E., Barrangou, R., Ganesan, B., Xie, Y., Rawsthorne, H., Tamir, D., Parker, C., Breidt, F., Broadbent, J., Hutkins, R., O'sullivan, D., Steele, J., Unlu, G., Saier, M., Klaenhammer, T., Richardson, P., Kozyavkin, S., Weimer, B., and Mills, D. "Comparative genomics of the lactic acid bacteria." Proc. Natl. Acad. Sci. USA (2006) 103:15611-15616.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Lactobacillus paracasei meta-databases BacDive
2 records from this provider organism-specific BioCyc
GOLD: Go0000284 organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
639633028: Lacticaseibacillus paracasei ATCC 334 organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Notes:
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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