8I3Z: Crystal structure of NAD-II riboswitch (two strands) with NMN at 1.67 angstrom

PDB ID: 8I3ZDownload
MMDB ID: 228193
PDB Deposition Date: 2023/1/18
Updated in MMDB: 2024/06
Experimental Method:
x-ray diffraction
Resolution: 1.67  Å
Source Organism:
Biological Unit for 8I3Z: dimeric; determined by author and by software (PISA)
Molecular Components in 8I3Z
Label Count Molecule
Nucleotides(2 molecules)
1
RNA (5'-r(*ap*gp*ap*gp*cp*gp*up*up*gp*cp*gp*up*cp*cp*gp*ap*ap*ap*gp*up*(cbv)p*gp*cp*c)-3')
Molecule annotation
1
RNA (31-mer)
Molecule annotation
Chemicals and Non-standard biopolymers (6 molecules)
1
4
SODIUM IONSODIUM ION
2
2
BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATEBETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303