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Conserved domains on  [gi|121582407|ref|YP_980185|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Coleonyx variegatus]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009581)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 21-115 4.50e-54

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 164.71  E-value: 4.50e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121582407  21 SFWLPQLTPDTEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLPTPWAINSPAPEAMMAWTSTIIALLSL 100
Cdd:MTH00136  22 SFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQLPSPLLTFFWATAVLILLTL 101

                         90
                 ....*....|....*
gi 121582407 101 GLLYEWLQGGLEWAE 115
Cdd:MTH00136 102 GLIYEWLQGGLEWAE 116
 
Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 21-115 4.50e-54

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 164.71  E-value: 4.50e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121582407  21 SFWLPQLTPDTEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLPTPWAINSPAPEAMMAWTSTIIALLSL 100
Cdd:MTH00136  22 SFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQLPSPLLTFFWATAVLILLTL 101

                         90
                 ....*....|....*
gi 121582407 101 GLLYEWLQGGLEWAE 115
Cdd:MTH00136 102 GLIYEWLQGGLEWAE 116
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
21-112 4.78e-31

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 105.58  E-value: 4.78e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121582407   21 SFWLPQLTPDTEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLptPWAINSPAPEAMMAWTSTI-IALLS 99
Cdd:pfam00507   4 SRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLF--PWAVSFRELGWFGFVEMLIfIAILL 81

                          90
                  ....*....|...
gi 121582407  100 LGLLYEWLQGGLE 112
Cdd:pfam00507  82 VGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 21-113 6.66e-24

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 88.25  E-value: 6.66e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121582407  21 SFWLPQLTPDTEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLptPWAINSPAPEAMMAWTSTI-IALLS 99
Cdd:COG0838   26 SRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLF--PWAVVFRELGWFGLIEMLVfIAILL 103

                         90
                 ....*....|....
gi 121582407 100 LGLLYEWLQGGLEW 113
Cdd:COG0838  104 VGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 21-115 4.50e-54

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 164.71  E-value: 4.50e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121582407  21 SFWLPQLTPDTEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLPTPWAINSPAPEAMMAWTSTIIALLSL 100
Cdd:MTH00136  22 SFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQLPSPLLTFFWATAVLILLTL 101

                         90
                 ....*....|....*
gi 121582407 101 GLLYEWLQGGLEWAE 115
Cdd:MTH00136 102 GLIYEWLQGGLEWAE 116
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 21-115 7.02e-53

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 161.70  E-value: 7.02e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121582407  21 SFWLPQLTPDTEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLPTPWAINSPAPEAMMAWTSTIIALLSL 100
Cdd:MTH00069  20 SFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQLNTPTNTLFWSTLILILLTL 99

                         90
                 ....*....|....*
gi 121582407 101 GLLYEWLQGGLEWAE 115
Cdd:MTH00069 100 GLIYEWIQGGLEWAE 114
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 21-114 6.95e-51

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 156.58  E-value: 6.95e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121582407  21 SFWLPQLTPDTEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLPTPWAINSPAPEAMMAWTSTIIALLSL 100
Cdd:MTH00113  21 NFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAINLTTPTTTLTWATIILTLLTL 100

                         90
                 ....*....|....
gi 121582407 101 GLLYEWLQGGLEWA 114
Cdd:MTH00113 101 GLIYEWLQGGLEWA 114
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 22-115 2.74e-44

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 139.69  E-value: 2.74e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121582407  22 FWLPQLTPDTEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLPTPWAINSPAPEAMMAWTSTIIALLSLG 101
Cdd:MTH00106  22 FWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLNTMLTMALLLISLLALS 101

                         90
                 ....*....|....
gi 121582407 102 LLYEWLQGGLEWAE 115
Cdd:MTH00106 102 LAYEWTQKGLEWTE 115
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 24-115 4.93e-37

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 121.63  E-value: 4.93e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121582407  24 LPQLTPDTEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLPTPWAINSPAPEAMMAWTSTIIALLSLGLL 103
Cdd:MTH00042  25 LPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATLITNPSTLLPISLIFLIILTIGLV 104

                         90
                 ....*....|..
gi 121582407 104 YEWLQGGLEWAE 115
Cdd:MTH00042 105 YEWVNGGLEWAE 116
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 21-113 2.56e-36

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 119.62  E-value: 2.56e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121582407  21 SFWLPQLTPDTEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLPTPWAINSPAPEAMMAwtSTIIALLSL 100
Cdd:MTH00203  22 AFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSNQLSSLSLLLA--FLFLILLTL 99

                         90
                 ....*....|...
gi 121582407 101 GLLYEWLQGGLEW 113
Cdd:MTH00203 100 GLIYEWLQGGLEW 112
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
21-112 4.78e-31

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 105.58  E-value: 4.78e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121582407   21 SFWLPQLTPDTEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLptPWAINSPAPEAMMAWTSTI-IALLS 99
Cdd:pfam00507   4 SRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLF--PWAVSFRELGWFGFVEMLIfIAILL 81

                          90
                  ....*....|...
gi 121582407  100 LGLLYEWLQGGLE 112
Cdd:pfam00507  82 VGLVYAWKKGALE 94
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 30-113 7.85e-30

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 102.93  E-value: 7.85e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121582407  30 DTEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLPTPWAINSPAPEAMMAWTSTIIALLSLGLLYEWLQG 109
Cdd:MTH00161  30 DREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNMMSWLITSSFFILILLLGLYYEWNQG 109


                 ....
gi 121582407 110 GLEW 113
Cdd:MTH00161 110 ALEW 113
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 30-115 8.23e-29

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 100.70  E-value: 8.23e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121582407  30 DTEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLPTPWAINSPAPEAMMAWTSTIIALLSLGLLYEWLQG 109
Cdd:MTH00148  32 DREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSLGSSFSVWSLTSLFIFLLILILGLFHEWNEG 111


                 ....*.
gi 121582407 110 GLEWAE 115
Cdd:MTH00148 112 SLDWVS 117
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 29-113 1.77e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 92.08  E-value: 1.77e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121582407  29 PDTEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLptPWAINSPAPEAMMAWTSTI-IALLSLGLLYEWL 107
Cdd:MTH00055  34 PDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLF--PWCVVYNQIGLFGFWVMYLfLIILTIGLIYEWV 111


                 ....*.
gi 121582407 108 QGGLEW 113
Cdd:MTH00055 112 KGGLEW 117
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 21-113 2.28e-25

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 91.66  E-value: 2.28e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121582407  21 SFWLPQLTPDTEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLptPWAINSPAPEAMMAWTSTI-IALLS 99
Cdd:MTH00018  21 SYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLF--PWCVLYNQIAPFGFWTMVGfLFILT 98

                         90
                 ....*....|....
gi 121582407 100 LGLLYEWLQGGLEW 113
Cdd:MTH00018  99 LGLIYEWIKGGLEW 112
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 30-115 3.20e-24

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 88.90  E-value: 3.20e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121582407  30 DTEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLPTPWAINSPAPEAMMAWTSTIIALLSLGLLYEWLQG 109
Cdd:MTH00202  32 DREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLVLKSSWSKGGLLGGTIFLLILIGGLIHEWKEG 111


                 ....*.
gi 121582407 110 GLEWAE 115
Cdd:MTH00202 112 SLDWVK 117
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 21-113 6.66e-24

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 88.25  E-value: 6.66e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121582407  21 SFWLPQLTPDTEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLptPWAINSPAPEAMMAWTSTI-IALLS 99
Cdd:COG0838   26 SRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLF--PWAVVFRELGWFGLIEMLVfIAILL 103

                         90
                 ....*....|....
gi 121582407 100 LGLLYEWLQGGLEW 113
Cdd:COG0838  104 VGLIYAWKKGALEW 117
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 29-114 1.03e-23

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 87.61  E-value: 1.03e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121582407  29 PDTEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLptPWAINSPAPEAMMAWTSTI-IALLSLGLLYEWL 107
Cdd:PRK06602  37 PDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLF--PWAVSFREIGWLGFVEAMIfILVLLVGLVYLWR 114


                 ....*..
gi 121582407 108 QGGLEWA 114
Cdd:PRK06602 115 KGALDWE 121
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 28-114 4.36e-23

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 86.07  E-value: 4.36e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121582407  28 TPDTEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLPTPWAINSPAPEAMMAWTSTIIALLSLGLLYEWL 107
Cdd:MTH00012  30 TADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTILMTSTSKTVVYTSILFLLILVIGLIHEWR 109


                 ....*..
gi 121582407 108 QGGLEWA 114
Cdd:MTH00012 110 EGSLDWS 116
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 29-113 1.64e-20

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 79.59  E-value: 1.64e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121582407  29 PDTEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLptPWAINSPAPEAMMAW-TSTIIALLSLGLLYEWL 107
Cdd:MTH00030  39 PDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLF--PWSIVFNQLNLFSFWiVYTFLIVLAIGLAYEWI 116


                 ....*.
gi 121582407 108 QGGLEW 113
Cdd:MTH00030 117 KGGLEW 122
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 33-113 1.02e-10

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 54.29  E-value: 1.02e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121582407  33 KLSPYECGFDPLGTARLP--FSLRFFLVAILFLLFDLEIALLLPTPWAINSPAPEAMMAWTStIIALLSLGLLYEWLQGG 110
Cdd:PRK07928  37 KLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYPWAVSFDALGVFGLVEMAL-FMLTVFVAYAYVWRRGG 115


                 ...
gi 121582407 111 LEW 113
Cdd:PRK07928 116 LEW 118
ndhC CHL00022
NADH dehydrogenase subunit 3
 32-113 5.55e-10

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 52.68  E-value: 5.55e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121582407  32 EKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLptPWAInSPAPEAMMAWTSTIIALLSL--GLLYEWLQG 109
Cdd:CHL00022  39 EKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLY--PWAM-SFDVLGVSAFIEALIFVLILivGLVYAWRKG 115


                 ....
gi 121582407 110 GLEW 113
Cdd:CHL00022 116 ALEW 119
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
30-113 1.05e-09

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 51.98  E-value: 1.05e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121582407  30 DTEKL--SPYECGFDPLGTARlPFSLRFFLVAILFLLFDLEIALLLptPWAINSpapeAMMAWTSTI-----IALLSLGL 102
Cdd:PRK08489  42 NTEKLklAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFMF--PWAVDF----KLLGLFGLIemllfIVLLTIGF 114

                         90
                 ....*....|.
gi 121582407 103 LYEWLQGGLEW 113
Cdd:PRK08489 115 IYAWKKGALEW 125
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
23-113 1.34e-09

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 51.67  E-value: 1.34e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121582407  23 WLPQLTPDTEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLPTPWAINSPAPEAMMAWTsTIIALLSLGL 102
Cdd:PRK07756  32 MLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWAVAYDKLGLFALIEML-IFVVMLLVGL 110

                         90
                 ....*....|.
gi 121582407 103 LYEWLQGGLEW 113
Cdd:PRK07756 111 AYAWKKKVLQW 121
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 33-73 1.74e-06

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 43.34  E-value: 1.74e-06
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 121582407  33 KLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLL 73
Cdd:MTH00092  34 KVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFL 74
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 35-76 4.58e-05

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 39.50  E-value: 4.58e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 121582407  35 SPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLPTP 76
Cdd:MTH00060  39 SSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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