|
Name |
Accession |
Description |
Interval |
E-value |
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
1-728 |
0e+00 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 1266.74 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 1 MESIYKYGWMIPLFPLLSSIIIGLGLLFFPKATRSFRRIYAIISTLLLSIAMVFSFHFFLQQITGNSTYRYSWSWIPNQN 80
Cdd:CHL00025 1 MEHTYQYAWIIPFLPLPVPMLIGLGLLLFPTATKNLRRMWAFPSILLLSIVMIFSLNLSIQQINGSSIYQYLWSWTINND 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 81 VTSEVGYLIDPLTSIMLVLVTTIGVMVMIHSDSYMSHDQGYVRFFAYLSLPNASMSGLVLSPNLIQIYIFRELVGMCSYL 160
Cdd:CHL00025 81 FSLEFGYLIDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 161 LIGFWFTRPSAANACQKAFITNRVGDFGLLLGTSGFYWIIGSFKFEDLFERFNESLANHEVSFFFATPCALLFLLGPVAK 240
Cdd:CHL00025 161 LIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNLLFATLCAFLLFLGPVAK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 241 SAQFPLHVWLPDAMEGPTPISAPIHAATMVAAGIFLVARMLPLLKALPLVMSPISWVGGITASLGATIALAQKDLKRILA 320
Cdd:CHL00025 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 321 YSTMSQLGYMMLASGIGSSRAALFHLITHAYPKALLSPGSGSVIHSMEPIVGYCPDKSQNIALMGGLRKYMPITGTTFLL 400
Cdd:CHL00025 321 YSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMEPIVGYSPDKSQNMVLMGGLRKYMPITKTTFLL 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 401 GTLSLCGIPPLACFWSKDEILADSWLYFPILGWIARFTAGLTGFYMFRMYFLTLEGDFRAN----SSKNVISSY-VSLWG 475
Cdd:CHL00025 401 GTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHLRVHfqnySGKKNSSFYsISLWG 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 476 NLQFGTSskKQTDSALPLAQNKIESFKPSENIQefSDENIKN---SVSTQFFREEYLPYPKESDNTMLFPLLILTIPTLF 552
Cdd:CHL00025 481 KEESKKI--NKLLLLLTMNNNERVSFFSKKTYK--IDGNVRNmirSFITIFGNKKTFSYPHESDNTMLFPLLVLVLFTLF 556
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 553 VGFIGVPFPQEETGSDSLSHWLDPSLSLSQKI--NYENWlLEFLTNATISVGIASLGIFIAFIPYGPI--PFFPRDLRQK 628
Cdd:CHL00025 557 VGFIGIPFNQEGIDLDILSKWLTPSINLLHQNsnNSVDW-YEFLTNAIFSVSIAFFGIFIASFLYGPVysSLQNLDLINS 635
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 629 T--DLQLEGILGHFSSLLYNWSYSRGYIDGYYNIVFIKGTRVLAKIISFFDQWIIDGIVNGVGISSSFGGEGSRYGEGGR 706
Cdd:CHL00025 636 FvkGGPKRIFLDKIINVIYNWSYNRGYIDAFYTISFIKGIRGLAELTHFFDRRVIDGITNGVGITSFFVGEGIKYVGGGR 715
|
730 740
....*....|....*....|..
gi 1583107296 707 ISYYLFGFISGTIILLLVVINY 728
Cdd:CHL00025 716 ISSYLFLYLFYVSIFLLILYFF 737
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
1-725 |
0e+00 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 758.79 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 1 MESIYKYGWMIPLFPLLSSIIIGLGLLFFPKATRSFRRIYAIISTLLLSIAMVFSFHFFLQQITGNSTYRYSWSWIPNQN 80
Cdd:PRK07376 1 MESAYQYAWLIPVLPLLGAVLVGLGLISFNQTTNRLRQPVAVLLISLVGAAAVLSYALLWSQIQGHEPYERLFEWASAGD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 81 VTSEVGYLIDPLTSIMLVLVTTIGVMVMIHSDSYMSHDQGYVRFFAYLSLPNASMSGLVLSPNLIQIYIFRELVGMCSYL 160
Cdd:PRK07376 81 FHLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 161 LIGFWFTRPSAANACQKAFITNRVGDFGLLLGTSGFYWIIGSFKFEDLFERFNESLANHEVSFFFATPCALLFLLGPVAK 240
Cdd:PRK07376 161 LVGFWYDRKGAADAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFDGIADRLSELVSSGAVSGWLALLLCILVFLGPMAK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 241 SAQFPLHVWLPDAMEGPTPISAPIHAATMVAAGIFLVARMLPLLKALPLVMSPISWVGGITASLGATIALAQKDLKRILA 320
Cdd:PRK07376 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 321 YSTMSQLGYMMLASGIGSSRAALFHLITHAYPKALLSPGSGSVIHSMEPIVGYCPDKSQNIALMGGLRKYMPITGTTFLL 400
Cdd:PRK07376 321 YSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEVVGHDPVLAQDMRLMGGLRKYMPITAITFLI 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 401 GTLSLCGIPPLACFWSKDEILADSWLYFPILGWIARFTAGLTGFYMFRMYFLTLEGDFRANSSKnvissyvslwgnlqfg 480
Cdd:PRK07376 401 GCLAISGIPPFAGFWSKDEILGAAFEANPALWFVGFLTAGMTAFYMFRMYFLTFEGEFRGNDKE---------------- 464
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 481 tsskkqtdsalplAQNKIESFKPSENIQEFSDENIKNSvstqffrEEYLPYPKESDNTMLFPLLILTIPTLFVGFIGVPF 560
Cdd:PRK07376 465 -------------LQKELLAAADAPGHHEGHHEEHGEH-------HHHSGSPHESPWTMTLPLVVLAVPSVLIGLLGTPW 524
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 561 pqeetgSDSLSHWL-DPSLSLSQKINYEnwLLEFLTNATISVGIASLGIFIAFIPYgpipffprdLRQKTDLQLegILGH 639
Cdd:PRK07376 525 ------NNRFEAFLhAPGEALEAAAHFE--WGEFLILAGASVGIALIGITLASLMY---------LLKKIDPAA--IAER 585
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 640 FSSlLYNWSYSRGYIDGYYNIVFIKGTRVLAKIISFFDQWIIDGIVNGVGISSSFGGEGSRYGEGGRISYY---LFGFIS 716
Cdd:PRK07376 586 FPP-LYQFSLNKWYLDDIYEKLFVKGSRRLARQVLEVDYKVVDGVVNLTGLVTLGSGEGLKYFENGRAQFYaliVFGAVL 664
|
....*....
gi 1583107296 717 GTIILLLVV 725
Cdd:PRK07376 665 GLVIVFGVT 673
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
9-724 |
0e+00 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 585.58 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 9 WMIPLFPLLSSIIIGLgllfFPKATRsfRRIYAIISTLLLSIAMVFSFhFFLQQITGNSTYRYSWSWIPNQNVTSEVGYL 88
Cdd:COG1009 5 WLIPLLPLLGALLAGL----LGRRLG--RRAAGWLAALAPLAAFVLSL-LLFPAVLGGEVVVELYTWIPVGSLGLDFGFR 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 89 IDPLTSIMLVLVTTIGVMVMIHSDSYMSHDQGYVRFFAYLSLPNASMSGLVLSPNLIQIYIFRELVGMCSYLLIGFWFTR 168
Cdd:COG1009 78 LDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEK 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 169 PSAANACQKAFITNRVGDFGLLLGTSGFYWIIGSFKFEDLFERfneslANHEVSFFFATPCALLFLLGPVAKSAQFPLHV 248
Cdd:COG1009 158 PSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAA-----APTILSSPLLTLILLLLLLGAFGKSAQFPLHF 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 249 WLPDAMEGPTPISAPIHAATMVAAGIFLVARMLPLLKALPLVMSPISWVGGITASLGATIALAQKDLKRILAYSTMSQLG 328
Cdd:COG1009 233 WLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLG 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 329 YMMLASGIGSSRAALFHLITHAYPKALLSPGSGSVIHSMEpivgycpdkSQNIALMGGLRKYMPITGTTFLLGTLSLCGI 408
Cdd:COG1009 313 YMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHATG---------TRDIRKMGGLRKKMPITAITFLIGALSLAGI 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 409 PPLACFWSKDEILADSWLYF---PILGWIARFTAGLTGFYMFRMYFLTLEGDFRANSSKNvissyvslwgnlqfgtsskk 485
Cdd:COG1009 384 PPFAGFFSKEAILEAALEAGglgPLLLAVALLGAFLTAFYSFRLFFLVFFGKPRPKTPKH-------------------- 443
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 486 qtdsalplaqnkiesfkpseniqefsdeniknsvstqffreeylpyPKESDNTMLFPLLILTIPTLFVGFIGVPFpqeet 565
Cdd:COG1009 444 ----------------------------------------------PHESPWLMTLPLVVLAVLSLVLGLLLPGL----- 472
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 566 gsdsLSHWLDPSLSLSQKINyenwLLEFLTNATISVGIASLGIFIAFIPYG--PIPFFPRDLRqktdlqlegilghfssL 643
Cdd:COG1009 473 ----LEGLLAPAAVLGGELH----LAHGLLLNALPLLLSLLGIALGYLLYLkrPLPALAERLK----------------P 528
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 644 LYNWSYSRGYIDGYYNIVFIKGTRVLAKIIsFFDQWIIDGIVNGVGISSSFGGEGSRYGEGGRISYYLFGFISGTIILLL 723
Cdd:COG1009 529 LYRLLANKWYFDELYDALFVKPVRALARFL-WFDRYVIDGIVNGLARLTLFSGRLLRRLQTGYLQFYALTILLGVVVLLL 607
|
.
gi 1583107296 724 V 724
Cdd:COG1009 608 L 608
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
9-726 |
0e+00 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 566.71 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 9 WMIPLFPLLSSIIIGLGllffpkATRSFRRIYAIISTLLLSIAMVFSFHFFLQ--QITGNSTYRYSWSWIPNQNVTSEVG 86
Cdd:PRK06590 6 WLIVLLPLIGALILGLF------GRRIGEKWAHLVGTGLVGLSALLSLVVFFDflLGGGRAFSQTLWTWISVGDFDVDFG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 87 YLIDPLTSIMLVLVTTIGVMVMIHSDSYMSHDQGYVRFFAYLSLPNASMSGLVLSPNLIQIYIFRELVGMCSYLLIGFWF 166
Cdd:PRK06590 80 LRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGFWY 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 167 TRPSAANACQKAFITNRVGDFGLLLGTSGFYWIIGSFKFEDLFERFNESLAnheVSFFFATPCALLFLLGPVAKSAQFPL 246
Cdd:PRK06590 160 KKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEFGSLNYDEVFAAAPQFFG---LGWSALTLICLLLFIGAMGKSAQFPL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 247 HVWLPDAMEGPTPISAPIHAATMVAAGIFLVARMLPLLKALPLVMSPISWVGGITASLGATIALAQKDLKRILAYSTMSQ 326
Cdd:PRK06590 237 HTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQ 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 327 LGYMMLASGIGSSRAALFHLITHAYPKALLSPGSGSVIHSMepivgycpDKSQNIALMGGLRKYMPITGTTFLLGTLSLC 406
Cdd:PRK06590 317 LGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAM--------HHEQDIRKMGGLRKKMPVTYATFLIGTLALI 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 407 GIPPLACFWSKDEILADSWLYFPI-LGWIARFTAGLTGFYMFRMYFLTLEGDfranssknvissyvslwgnlqfgtsskk 485
Cdd:PRK06590 389 GIPPFAGFFSKDEILEAAFANGHInLFVAGLVGAFLTAFYSFRLIFLVFHGK---------------------------- 440
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 486 qtdsalplaqnkiesfkpseniqefsdeniknsvstqffREEYLPYPKESDNTMLFPLLILTIPTLFVGFIGVPfpqeet 565
Cdd:PRK06590 441 ---------------------------------------EKEKIHHPHESPAVMTLPLIVLAVLSVFAGALIVP------ 475
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 566 gsdSLSHWLDPSLSLsqkINYENWLLEFLTNATISVGIASLGIFIAFIPYGPIPFFPRDLRQKtdlqlegilghfSSLLY 645
Cdd:PRK06590 476 ---PFLGVLPLTTEL---AHGEAEHHLPVWVALLPLVVALAGIALAWLLYLKKPTLPTSIAAP------------GRFLY 537
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 646 NWSYSRGYIDGYYNIVFIKGTRVLAKIIS-FFDQWIIDGIVNGVGISSSFGGEGSRYGEGGRISYYLFGFISGTIILLLV 724
Cdd:PRK06590 538 TLLRNKYYFDELYEKVFVKPGLALARLLWkDGDDGIIDGLVPNSARLVGGGSRVLRRLQTGYLRHYAASMLIGAVVLLAL 617
|
..
gi 1583107296 725 VI 726
Cdd:PRK06590 618 LL 619
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
9-717 |
2.06e-166 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 492.57 E-value: 2.06e-166
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 9 WMIPLFPLLSSIIIGLGllffpkATRSFRRIYAIISTLLLSIAMVFSFHFFLQQITGNSTYRYS---WSWIPNQNVTSEV 85
Cdd:TIGR01974 4 FLIVFLPLIGFLIAGLF------GRRIGERVSGIIGIGSVGLSAALSAFVFVDFFLNGEGEAFTqslFPWISVGGFQVDF 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 86 GYLIDPLTSIMLVLVTTIGVMVMIHSDSYMSHDQGYVRFFAYLSLPNASMSGLVLSPNLIQIYIFRELVGMCSYLLIGFW 165
Cdd:TIGR01974 78 GLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFW 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 166 FTRPSAANACQKAFITNRVGDFGLLLGTSGFYWIIGSFKFEDLFERFNEslanheVSFFFATPCALLFLLGPVAKSAQFP 245
Cdd:TIGR01974 158 YKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTLNFQEVFALAPG------AFFSALTLICLLLFIGAMGKSAQLP 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 246 LHVWLPDAMEGPTPISAPIHAATMVAAGIFLVARMLPLLKALPLVMSPISWVGGITASLGATIALAQKDLKRILAYSTMS 325
Cdd:TIGR01974 232 LHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFELSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMS 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 326 QLGYMMLASGIGSSRAALFHLITHAYPKALLSPGSGSVIHSMEpivgycpdKSQNIALMGGLRKYMPITGTTFLLGTLSL 405
Cdd:TIGR01974 312 QLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMH--------HEQDIRKMGGLRKKMPVTYITFLIGSLAL 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 406 CGIPPLACFWSKDEIL--ADSWLYFPILGWIARFTAGLTGFYMFRMYFLTLEGdfranssknvissyvslwgnlqfgtss 483
Cdd:TIGR01974 384 IGFPGFAGFFSKDLILeaAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHG--------------------------- 436
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 484 kkqtdsalplaQNKIESFKPseniqefsdeniknsvstqffreeylpyPKESDNTMLFPLLILTIPTLFVGFIGVPFPqe 563
Cdd:TIGR01974 437 -----------KERHEADAH----------------------------PHESPLVMLLPLIVLAVGSVFAGFFIVPLF-- 475
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 564 ETGSDSLSHWLDPSLSLSQKINYENWLlefltnatiSVGIASLGIFIAFIPYGPIPFFPRDLRQKtdlqlegilghfSSL 643
Cdd:TIGR01974 476 EFLKGVLPTSAEPALEHHHVPALEIWS---------PTAVAILGILLAYLLYLGNPTLPAKIAQR------------HSG 534
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1583107296 644 LYNWSYSRGYIDGYYNIVFIKGTRVLAKIISFF-DQWIIDGIVNGVGISSSFGGEGSRYGEGGRISYYLFGFISG 717
Cdd:TIGR01974 535 LYRLLLNKWYFDELYDKVFVKPYLFLGKLLWKDpDDKIIDGFGPGIARLVGAISKRLRKSQTGYLRWYAASMVVG 609
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
10-468 |
1.64e-103 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 329.73 E-value: 1.64e-103
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 10 MIPLFPLLSSIIIGLGLLFFPkatrsfRRIYAIISTLLLSIAMVFSFHFFLQQITGNSTYRYS-WSWIPNQNVTSEVGYL 88
Cdd:MTH00020 4 LVLFLPLLGALLSGLFGRKIG------EKGAGILTSSCLIISLSWSFLIFYEILFNSSTTYIKlWRWLDSDLLTVYFGLQ 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 89 IDPLTSIMLVLVTTIGVMVMIHSDSYMSHDQGYVRFFAYLSLPNASMSGLVLSPNLIQIYIFRELVGMCSYLLIGFWFTR 168
Cdd:MTH00020 78 FDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTR 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 169 PSAANACQKAFITNRVGDFGLLLGTSGFYWIIGSFKFEDLFerfneSLANHEVSFFFATPCALLFLlGPVAKSAQFPLHV 248
Cdd:MTH00020 158 IEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDFSSVF-----NMVVSAPSSDITLICLFLFI-GAVGKSAQLGLHT 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 249 WLPDAMEGPTPISAPIHAATMVAAGIFLVARMLPLLKALPLVMSPISWVGGITASLGATIALAQKDLKRILAYSTMSQLG 328
Cdd:MTH00020 232 WLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLG 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 329 YMMLASGIGSSRAALFHLITHAYPKALLSPGSGSVIHSMepivgycpDKSQNIALMGGLRKYMPITGTTFLLGTLSLCGI 408
Cdd:MTH00020 312 YMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHAL--------SDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGF 383
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1583107296 409 PPLACFWSKDEIL--ADSWLYFPILGWIARFTAGLTGFYMFRMYFLTLEGDfrANSSKNVIS 468
Cdd:MTH00020 384 PYLTGFYSKDLILelAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTFLSN--TNLKKAVFF 443
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
10-467 |
1.30e-100 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 322.34 E-value: 1.30e-100
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 10 MIPLFPLLSSIIIGLgllffpkatrsF-RRIYAIISTLLLSIAMVFSFH-----FFLQQITGNSTYRYSWSWIPNQNVTS 83
Cdd:MTH00210 4 LVLFLPLLSAIISGL-----------FgRKIGTKGAGILTSSCIVISAIvscciFYETTLNGSATYIKLWRWFDSELLTT 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 84 EVGYLIDPLTSIMLVLVTTIGVMVMIHSDSYMSHDQGYVRFFAYLSLPNASMSGLVLSPNLIQIYIFRELVGMCSYLLIG 163
Cdd:MTH00210 73 YFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLIN 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 164 FWFTRPSAANACQKAFITNRVGDFGLLLGTSGFYWIIGSFKFEDLFERFNESLANHEVSFFfatpCALLFLlGPVAKSAQ 243
Cdd:MTH00210 153 FWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFSTISSLLVTNINKESLTII----CLLLFI-GAVGKSAQ 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 244 FPLHVWLPDAMEGPTPISAPIHAATMVAAGIFLVARMLPLLKALPLVMSPISWVGGITASLGATIALAQKDLKRILAYST 323
Cdd:MTH00210 228 LGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTAFFAATVGVVQNDLKKVIAYST 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 324 MSQLGYMMLASGIGSSRAALFHLITHAYPKALLSPGSGSVIHSMepivgycpDKSQNIALMGGLRKYMPITGTTFLLGTL 403
Cdd:MTH00210 308 CSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAV--------SDEQDMRKMGGLIKSIPFTYVMILIGSL 379
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1583107296 404 SLCGIPPLACFWSKDEILADSW--LYFPILGWIARFTAGLTGFYMFRMYFLTLEGDfrANSSKNVI 467
Cdd:MTH00210 380 SLMGFPYLTGFYSKDLILELTYdkYYIAFAYWLGSFSALLTAFYSIRLIYLTFITN--TNSKKEVF 443
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
41-421 |
6.98e-81 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 271.45 E-value: 6.98e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 41 AIISTLLLSIAMVFSFHFFLQQITGNSTYRYS-WSWIPNQNVTSEVGYLIDPLTSIMLVLVTTIGVMVMIHSDSYMSHDQ 119
Cdd:MTH00032 29 GILSTICMGSSTLIALFLAYEVLINDAVVHIElYKWIESEIFITHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDP 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 120 GYVRFFAYLSLPNASMSGLVLSPNLIQIYIFRELVGMCSYLLIGFWFTRPSAANACQKAFITNRVGDFGLLLGTSGFYWI 199
Cdd:MTH00032 109 HVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKT 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 200 IGSFKFEDL---------FERFNESLANHEVSFFFATPCALLFLLGPVAKSAQFPLHVWLPDAMEGPTPISAPIHAATMV 270
Cdd:MTH00032 189 IGSLDFLTFnggsvgsgiMDRGYYGGGAYESPLAPFAIIGILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMV 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 271 AAGIFLVARMLPLLKALPLVMSPISWVGGITASLGATIALAQKDLKRILAYSTMSQLGYMMLASGI-GSSRAALFHLITH 349
Cdd:MTH00032 269 TAGVFLMIRSFPLFEKAPLTLLIITIFGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNH 348
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1583107296 350 AYPKALLSPGSGSVIHSMEPivgycpdKSQNIALMGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSKDEIL 421
Cdd:MTH00032 349 AFFKALLFLSAGSVIHSTTV-------DEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLIL 413
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
9-725 |
2.50e-80 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 268.32 E-value: 2.50e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 9 WMIPLFPLLSSIiigLGLLFFPKATR-SFRRIYAIISTLLLSIAMVFSFhFFLQQITGNSTYRYSWSWIPNQNVTSEVGY 87
Cdd:PRK07390 10 WLIPLYGLIGAL---LSLPWSPGIIRrTGPRPAAYLNLLMTLLAFVHSL-LALRAIWNQPPQQLSFPWLQVADLDLSLSL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 88 LIDPLTSIMLVLVTTIGVMVMIHSDSYMSHDQGYVRFFAYLSLPNASMSGLVLSPNLIQIYIFRELVGMCSYLLIGFWFT 167
Cdd:PRK07390 86 EISPVTLGALELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLLVGFWYA 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 168 RPSAANACQKAFITNRVGDFGLLLGTSGFYWIIGSFKFEDLFERfnesLANHEVSFFFATPCALLFLLGPVAKSAQFPLH 247
Cdd:PRK07390 166 QPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAGTLNFSDLAAW----AATANLDPLTATLLGLALIAGPTGKCAQFPLH 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 248 VWLPDAMEGPTPISApIHAATMVAAGIFLVARMLPLLKALPLVMSPISWVGGITASLGATIALAQKDLKRILAYSTMSQL 327
Cdd:PRK07390 242 LWLDEAMEGPNPASI-LRNSVVVATGAWVLIKLQPVLALSPVALTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 328 GYMMLASGIGSSRAALFHLITHAYPKALLSPGSGSVIHSmepivgycpDKSQNIALMGGLRKYMPITGTTFLLGTLSLCG 407
Cdd:PRK07390 321 GLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSIILT---------TITQDLTELGGLWSRMPATTLAFLVGSAGLVA 391
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 408 IPPLACFWSKDEILADSWLYFPILGWIARFTAGLTGFYMFRMYfltlegdfranssknvissyvslwgNLQFGTSSKKQT 487
Cdd:PRK07390 392 LLPLGGFWALLRLADGLWAVSPWLVGVLLLVNALTAFNLTRVF-------------------------RLVFLGKPQQKT 446
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 488 DsalplaqnkiesfkpseniqefsdeniknsvstqffREEYLPYPkesdntMLFPLLILTIPTLFVGFIgvpfpqeetgs 567
Cdd:PRK07390 447 R------------------------------------RSPEVLWP------MALPMVILAGFTLHLPLL----------- 473
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 568 dsLSHW-LDPSLslsqkiNYENWLLEFLTNATISVGIAsLGifiAFIPYG-----PIPFFPRDLRqktDLqlegilghfs 641
Cdd:PRK07390 474 --LQQWgLLPSW------EALNLWAAPLLVASGLLGVL-LG---AWIYLNkawsrPIQLPLRFLQ---DL---------- 528
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 642 sLLYNWsysrgYIDGYYNIVFIKGTRVLAKIISFFDQWIIDGIVNGVGISSSFGGEGSRYGEGGRISYYLFGFISGTIIL 721
Cdd:PRK07390 529 -LAYDF-----YTDRLYRLTIVFVVALISRLTAWFDRYVVDGLVNLVGLATLFSGQGLKYSVSGQSQFYVLTILLGVALL 602
|
....
gi 1583107296 722 LLVV 725
Cdd:PRK07390 603 GALL 606
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
18-462 |
1.03e-78 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 263.74 E-value: 1.03e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 18 SSIIIGLGLLFFPKATRSFRRIYAIISTLLLS--IAMVFSFHFFLQQITGNSTYrysWSWIPNQNVTSEVGYLIDPLTSI 95
Cdd:MTH00211 7 SGFLLILILLLLPLLLPLNNSKLHIKKAVKLSffISLIPLLIFLDQGLETILTN---WSWINLGLFSLNLSFKFDFYSIF 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 96 MLVLVTTIGVMVMIHSDSYMSHDQGYVRFFAYLSLPNASMSGLVLSPNLIQIYIFRELVGMCSYLLIGFWFTRPSAANAC 175
Cdd:MTH00211 84 FTSVALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAA 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 176 QKAFITNRVGDFGLLLGTSGFYWIIGSFKFEDLFerfneslanheVSFFFATPCALLFLLGPVAKSAQFPLHVWLPDAME 255
Cdd:MTH00211 164 LQAVIYNRIGDIGLLLSMVWLLLNLNSWEISQLF-----------ILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAME 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 256 GPTPISAPIHAATMVAAGIFLVARMLPLLKALPLVMSPISWVGGITASLGATIALAQKDLKRILAYSTMSQLGYMMLASG 335
Cdd:MTH00211 233 GPTPVSALLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLG 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 336 IGSSRAALFHLITHAYPKALLSPGSGSVIHSMepivgycpDKSQNIALMGGLRKYMPITGTTFLLGTLSLCGIPPLACFW 415
Cdd:MTH00211 313 LNQPQLAFLHICTHAFFKAMLFMCSGSIIHGL--------NNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFF 384
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 1583107296 416 SKDEILAD---SWLYFpILGWIARFTAGLTGFYMFRMYFLTLEGDFRANS 462
Cdd:MTH00211 385 SKDLILESmngSYLNA-WALLLTLLATSLTAAYSFRLIFLSLGGYPRFLS 433
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
30-432 |
1.47e-75 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 259.08 E-value: 1.47e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 30 PKATRSFRRIYAIISTLLlSIAMVFSFHFFLQQITGNSTYRYSWSWIPNQNVTseVGYLIDPLTSIMLVLVTTIGVMVMI 109
Cdd:PRK12647 6 PWLHRLFGRNAGWLLALL-PLALFLYFLSFIPEIAAGETVRGGYAWVPSLGVN--LSFLLDGLSLTFALLITGIGTLIVL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 110 HSDSYMSHDQGYVRFFAYLSLPNASMSGLVLSPNLIQIYIFRELVGMCSYLLIGFWFTRPSAANACQKAFITNRVGDFGL 189
Cdd:PRK12647 83 YAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLAL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 190 LLGTSGFYWIIGSFKFEDLFErFNESLANHEvsffFATPCALLFLLGPVAKSAQFPLHVWLPDAMEGPTPISAPIHAATM 269
Cdd:PRK12647 163 LAGLILLGNVTGTYSLSELLA-SGDVIREHP----LYLAILLLVLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATM 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 270 VAAGIFLVARMLPLLKALPLVMSPISWVGGITASLGATIALAQKDLKRILAYSTMSQLGYMMLASGIGSS---RAALFHL 346
Cdd:PRK12647 238 VKAGIYLLARLNPVLGGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSElaiKAAVLFL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 347 ITHAYPKALLSPGSGSVIHSmepiVGycpdkSQNIALMGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSKDEILAdSWL 426
Cdd:PRK12647 318 VAHSLYKGALFMVAGIIDHE----TG-----TRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYE-ALL 387
|
....*.
gi 1583107296 427 YFPILG 432
Cdd:PRK12647 388 EAPLWS 393
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
141-440 |
5.73e-75 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 244.14 E-value: 5.73e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 141 SPNLIQIYIFRELVGMCSYLLIGFWFTRPSAANACQKAFITNRVGDFGLLLGTSGFYWIIGSFKFEDLFERFNESLANHE 220
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 221 VSFffatpCALLFLLGPVAKSAQFPLHVWLPDA-MEGPTPISApIHAATMVAAGIFLVARMLPLL-KALPLVMSPISWVG 298
Cdd:pfam00361 81 LLL-----LFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSA-LLAATLVKAGGYGLIRRSLLYlPSSPFIQQILLILA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 299 GITASLGATIALAQKDLKRILAYSTMSQLGYMMLASGIGSS---RAALFHLITHAYPKALLSPGSGSVIHSMEpivgycp 375
Cdd:pfam00361 155 IISMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIygiQAAIFHLLTHGLFSAGLFLCAGSVIYRRV------- 227
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1583107296 376 dKSQNIALMGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSKDEILADSWLYFPILGWIARFTAG 440
Cdd:pfam00361 228 -HTRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
11-459 |
1.17e-69 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 243.68 E-value: 1.17e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 11 IPLFPLLSSIIIglgllffPKATRSFRRIYAIISTLLLSIAMVFSFHFFLQQITGNSTYRYSWSWIP--NQNVTSEVgyl 88
Cdd:PRK12645 7 AILLPFIFALLI-------PFLYKYFKRIHTGWFVLPVPVVLFIYFLSLIPTTMSGNTVMKTLPWIPslGINFTLYV--- 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 89 iDPLTSIMLVLVTTIGVMVMIHSDSYMSHDQGYV-RFFAYLSLPNASMSGLVLSPNLIQIYIFRELVGMCSYLLIGFWFT 167
Cdd:PRK12645 77 -DGLSLLFALLITGIGSLVVLYSIYYLSKKKEQLgNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYE 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 168 RPSAANACQKAFITNRVGDFGLLLGTSGFYWIIGSFKFEDLFERFNEsLANHevSFFfaTPCALLFLLGPVAKSAQFPLH 247
Cdd:PRK12645 156 REASRYGAQKSMLITVFGGLSMLGGFILLYIMTGSFSIREMIANADE-IQNS--PLF--IPAMILILLGAFTKSAQFPFY 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 248 VWLPDAMEGPTPISAPIHAATMVAAGIFLVARMLPLLKALPLVMSPISWVGGITASLGATIALAQKDLKRILAYSTMSQL 327
Cdd:PRK12645 231 IWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTVSQL 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 328 GYMMLASGIGS----------------SRAALFHLITHAYPKALLSPGSGSVIHSmepiVGycpdkSQNIALMGGLRKYM 391
Cdd:PRK12645 311 GLIMSLLGIGAaslhyqgddskiyaaaITAAIFHLINHATFKGSLFMIVGIVDHE----TG-----TRDIRKLGGLMTIM 381
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 392 PITGTTFLLGTLSLCGIPPLACFWSKDEILA-------------DSW-LYFPILGWIARFtagLTGFYMFRMYFLTLEGD 457
Cdd:PRK12645 382 PITFTIALIGALSMAGLPPFNGFLSKEMFFEsmlnateanlfslDTWgVLFPVIAWVASV---FTFVYSIIFIFKTFFGK 458
|
..
gi 1583107296 458 FR 459
Cdd:PRK12645 459 YK 460
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
11-453 |
1.56e-69 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 234.27 E-value: 1.56e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 11 IPLFPLLSSIIIGLGLLFFPKATRsFRRIYAIISTLLLSIAMVFsfhfFLQQITGNSTYRYSW-SWIPNQNVTsevgYLI 89
Cdd:COG0651 4 LLILPVLLPLLAAALLLLLGRRRR-LQRALSLLASLALLALALA----LLLQVLAGGPLVYALgGWPAPFGIV----LVA 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 90 DPLTSIMLVLVTTIGVMVMIHSDSYMSHDQGYVRFFAYLSLPNASMSGLVLSPNLIQIYIFRELVGMCSYLLIGFWFTRP 169
Cdd:COG0651 75 DRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKE 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 170 SAAnACQKAFITNRVGDFGLLLGTSGFYWIIGSFKFEDLFERFneslanHEVSFFFATPCALLFLLGPVAKSAQFPLHVW 249
Cdd:COG0651 155 ALR-AGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARL------AELDPGLLLAAFALLLVGFGIKAALFPLHFW 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 250 LPDAM-EGPTPISAPIHAAtMVAAGIFLVARMLPLL---KALPLVMSPISWVGGITASLGATIALAQKDLKRILAYSTMS 325
Cdd:COG0651 228 LPDAYpAAPSPVSALLSGL-LTKVGVYAILRVLTLLfgaDPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVS 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 326 QLGYMMLASGIGSSR---AALFHLITHAYPKALLSPGSGSVIHSMepivgycpdKSQNIALMGGLRKYMPITGTTFLLGT 402
Cdd:COG0651 307 QIGYILLGLGLGTPLglaGALFHLLNHALAKALLFLAAGAIERAT---------GTRDLDKLGGLGKRMPLTAAAFLIGA 377
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 1583107296 403 LSLCGIPPLACFWSKDEIL---ADSWLYfpILGWIARFTAGLTGFYMFRMYFLT 453
Cdd:COG0651 378 LALAGLPPLSGFVSKWLLLqaaLEAGAW--LLAAVLLLSSLLTLAYFVRIFGRA 429
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
114-456 |
2.94e-69 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 238.14 E-value: 2.94e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 114 YMSHDQGYVRFFAYLSLPNASMSGLVLSPNLIQIYIFRELVGMCSYLLIGFWFTRPSAANACQKAFITNRVGDFGLLLGT 193
Cdd:MTH00004 107 YMASDPHITKFFKYLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSGRAEANTAALQAIIYNRIGDIGLILSM 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 194 SGFYWIIGSFKFEDLFerfneslANHEVSfffaTPCALLFLLGPVAKSAQFPLHVWLPDAMEGPTPISAPIHAATMVAAG 273
Cdd:MTH00004 187 AWLAMTLNTWEIQQLF-------SPTQTP----TLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAG 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 274 IFLVARMLPLLKALPLVMSPISWVGGITASLGATIALAQKDLKRILAYSTMSQLGYMMLASGIGSSRAALFHLITHAYPK 353
Cdd:MTH00004 256 IFLLIRTHPLLQNNQTALTICLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFK 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 354 ALLSPGSGSVIHSMepivgycpDKSQNIALMGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSKD---EILADSWL--YF 428
Cdd:MTH00004 336 AMLFLCSGSIIHNL--------NNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDtiiETLNTSYLnaWA 407
|
330 340
....*....|....*....|....*...
gi 1583107296 429 PILGWIArfTAgLTGFYMFRMYFLTLEG 456
Cdd:MTH00004 408 LLLTLLA--TS-FTAAYSLRMILLVQTG 432
|
|
| Proton_antipo_C |
pfam01010 |
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a ... |
448-677 |
3.07e-69 |
|
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a carboxyl terminal extension of pfam00361. It includes subunit 5 from chloroplasts, and bacterial subunit L. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane. This family is largely a few TM regions of the F subunit of NADH-Ubiquinone oxidoreductase from plants. The TMs form part of the anti-porter subunit.
Pssm-ID: 366417 [Multi-domain] Cd Length: 244 Bit Score: 227.11 E-value: 3.07e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 448 RMYFLTLEGDFRAN----SSKNVISSY-VSLWGNlQFGTSSKKQTDSALPLAQNKIESFKPSENIQEFSDENIKN----- 517
Cdd:pfam01010 1 RIYLLTFEGHLNVHfqnySGKKNSSFYsISLWGK-EGSKLINKNFRTLLLLTMNNNEKVSFFSKKTYRIDGNVRNmtrpf 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 518 SVSTQFFREEYLPYPKESDNTMLFPLLILTIPTLFVGFIGVPFPQEETGSDSLSHWLDPSLSLSQKI--NYENWlLEFLT 595
Cdd:pfam01010 80 ITITHFDNKKTFSYPHESDNTMLFPLLVLVLFTLFVGFIGIPFNQEGIDLDILSKWLTPSINLLHKNsnNSVDW-YEFVT 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 596 NATISVGIASLGIFIAFIPYGPI--PFFPRDLR---QKTDLQlEGILGHFSSLLYNWSYSRGYIDGYYNIVFIKGTRVLA 670
Cdd:pfam01010 159 NAIFSVSIAYFGIFIASFLYKPVysSFQNLDLInsfVKKGPK-RIFLDKIINVIYNWSYNRGYIDVFYTTSFTRGIRGLA 237
|
....*..
gi 1583107296 671 KIISFFD 677
Cdd:pfam01010 238 ELTHFFD 244
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
27-459 |
4.24e-69 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 242.06 E-value: 4.24e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 27 LFFPKATRSFRRIYaiISTLLLSIAMV-FSFHFFLQQITGN-STYRYSWSWIPNQNVTSEVgyLIDPLTSIMLVLVTTIG 104
Cdd:TIGR00940 13 SLIPILYPSDQRIH--IGWFVLAIPLVcFLYTLGLYPYTASgGVLHYTIDWVPELGLNFTL--YMDGLALLFSLLITGIG 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 105 VMVMIHSDSYMSHDQGYVRFFAYLSLPNASMSGLVLSPNLIQIYIFRELVGMCSYLLIGFWFTRPSAANACQKAFITNRV 184
Cdd:TIGR00940 89 VLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYWHHRAHSRYGAQKSLTITVF 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 185 GDFGLLLGTSGFYWIIGSFKFEDLFERFNESLANHevsffFATPCALLFLLGPVAKSAQFPLHVWLPDAMEGPTPISAPI 264
Cdd:TIGR00940 169 GGLAMLGGLILLGKITGSFSIDAVIASADAIRNSP-----LFGTAMVLVLLGAFTKSAQFPFHIWLPDAMEAPTPVSAYL 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 265 HAATMVAAGIFLVARMLPLLKALPLVMSPISWVGGITASLGATIALAQKDLKRILAYSTMSQLGYMMLASGIGSSR---- 340
Cdd:TIGR00940 244 HSATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLIMVLLGLGSPSyhyq 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 341 ------------AALFHLITHAYPKALLSPGSGSVIHSmepivgycpDKSQNIALMGGLRKYMPITGTTFLLGTLSLCGI 408
Cdd:TIGR00940 324 gddskiyalaavAAVFHLINHATFKGSLFMAAGIIDHE---------TGTRDIRKLGGLFHIMPITFTLAMIASAAMAGV 394
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1583107296 409 PPLACFWSKDEILA-------------DSWLY-FPILGWIARFtagLTGFYMFRMYFLTLEGDFR 459
Cdd:TIGR00940 395 PPFNGFLSKEMFFAeaitahlvnpfdtVTLGYlFPYVATVASV---FTFVYSLRFIHGVFFGRPK 456
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
12-451 |
1.21e-68 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 237.18 E-value: 1.21e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 12 PLFPLLSSIIIGLGLLFFPKATRSFRRIYAIISTL-LLSIAMVFSFHFFLQqITGNSTYRYSWSWIPNQNVTSEVGYLID 90
Cdd:MTH00208 28 SNLPNISTSNASLGGNNNNNSIINYNNSNFSISLLkTLAFLSLINLLIWIL-LGCPNINISLSNWLSNTLFNFSLSFIFD 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 91 PLTSIMLVLVTTIGVMVMIHSDSYMSHDQGYVRFFAYLSLPNASMSGLVLSPNLIQIYIFRELVGMCSYLLIGFWFTRPS 170
Cdd:MTH00208 107 FYFILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRND 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 171 AANACQKAFITNRVGDFGLLLGTSGfywIIGSFKFEDLFERFneSLANHEVSFFFAtpcaLLF--LLGPVAKSAQFPLHV 248
Cdd:MTH00208 187 ANSSALQAVIYNRIGDIGIILFLSL---SLINFNSWNLNEIL--SLNNSNSFLINI----LLFgiLLAAAGKSAQFGLHP 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 249 WLPDAMEGPTPISAPIHAATMVAAGIFLVARMLPLLKALPLVMSPISWVGGITASLGATIALAQKDLKRILAYSTMSQLG 328
Cdd:MTH00208 258 WLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLISNSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLG 337
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 329 YMMLASGIGSSRAALFHLITHAYPKALLSPGSGSVIHSMepivgycpDKSQNIALMGGLRKYMPITGTTFLLGTLSLCGI 408
Cdd:MTH00208 338 LMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSL--------NNEQDLRKMGGLSFLLPVTSSCIILGSLALMGT 409
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 1583107296 409 PPLACFWSKDEILADSWLYFP-----ILGWIARFtagLTGFYMFRMYF 451
Cdd:MTH00208 410 PFLAGFYSKDLILEAGLASISnllsiILALIATL---LTAVYSFRIIF 454
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
114-454 |
1.63e-68 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 236.34 E-value: 1.63e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 114 YMSHDQGYVRFFAYLSLPNASMSGLVLSPNLIQIYIFRELVGMCSYLLIGFWFTRPSAANACQKAFITNRVGDFGLLLGT 193
Cdd:MTH00066 105 YMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHARADANTAALQAVLYNRVGDIGLILSM 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 194 SGFYWIIGSFKFEDLFERFNESlanhevsfffaTPCALLFLLGPVAKSAQFPLHVWLPDAMEGPTPISAPIHAATMVAAG 273
Cdd:MTH00066 185 AWLAMNTNSWELQQIFLLNDNS-----------TLPLLGLILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAG 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 274 IFLVARMLPLLKALPLVMSPISWVGGITASLGATIALAQKDLKRILAYSTMSQLGYMMLASGIGSSRAALFHLITHAYPK 353
Cdd:MTH00066 254 IFLLIRFHPLLENNQTALTICLCLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFK 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 354 ALLSPGSGSVIHSMepivgycpDKSQNIALMGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSKDEIL-------ADSWL 426
Cdd:MTH00066 334 AMLFLCSGSIIHSL--------NDEQDIRKMGGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIeamntsnLNSWA 405
|
330 340
....*....|....*....|....*....
gi 1583107296 427 YfpILGWIA-RFTAgltgFYMFRMYFLTL 454
Cdd:MTH00066 406 L--ILTLIAtSFTA----VYSFRIIYFSS 428
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
110-421 |
1.73e-66 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 230.87 E-value: 1.73e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 110 HSDSYMShdqgyvRFFAYLSLPNASMSGLVLSPNLIQIYIFRELVGMCSYLLIGFWFTRPSAANACQKAFITNRVGDFGL 189
Cdd:MTH00137 113 HADPNMN------RFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVIYNRVGDIGL 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 190 LLGTSGFYWIIGSFKFEDLFerfneSLANHevsfFFATPCALLFLLGPVAKSAQFPLHVWLPDAMEGPTPISAPIHAATM 269
Cdd:MTH00137 187 ILAMAWMATNLNSWEIQQIF-----ALSKD----FDLTLPLLGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTM 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 270 VAAGIFLVARMLPLLKALPLVMSPISWVGGITASLGATIALAQKDLKRILAYSTMSQLGYMMLASGIGSSRAALFHLITH 349
Cdd:MTH00137 258 VVAGIFLLIRLSPLMENNQTALTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTH 337
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1583107296 350 AYPKALLSPGSGSVIHSMepivgycpDKSQNIALMGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSKDEIL 421
Cdd:MTH00137 338 AFFKAMLFLCSGSIIHSL--------NDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAII 401
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
11-435 |
2.34e-64 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 230.85 E-value: 2.34e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 11 IPLFPLLSSIIIGLgllfFPKATRSFRRIYAIISTLLlSIAMVFSFHfflQQITGNSTYRYSWSWIPnqnvtsEVG---- 86
Cdd:PRK12648 6 LVLLPFLGALLAAL----LPRNARNAEAWLAGLVALA-ALVLLALLY---PAVAAGEVIRAEIEWLP------ALGlnls 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 87 YLIDPLTSIMLVLVTTIGVMVMIHSDSYMSHDQGYVRFFAYLSLPNASMSGLVLSPNLIQIYIFRELVGMCSYLLIGFWF 166
Cdd:PRK12648 72 LRLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWH 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 167 TRPSAANACQKAFITNRVGDFGLLLGTSGFYWIIGSFkfeDLferfNESLANHEV--SFFFATPCALLFLLGPVAKSAQF 244
Cdd:PRK12648 152 HRADARRGARMALTVTGAGGLALLAGVLLLGHIVGSY---DL----DVVLAAGDLirAHPLYPPALVLILLGAFTKSAQF 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 245 PLHVWLPDAMEGPTPISAPIHAATMVAAGIFLVARMLPLLKALPLVMSPISWVGGITASLGATIALAQKDLKRILAYSTM 324
Cdd:PRK12648 225 PFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEWFWIVGGAGLITLLLGAYFALFQHDLKGLLAYSTI 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 325 SQLGYMMLASGIGSSR---AALFHLITHAYPKALLSPGSGSVIHSMepivgycpdKSQNIALMGGLRKYMPITGTTFLLG 401
Cdd:PRK12648 305 SHLGLITLLLGLGSPLaavAAIFHIINHATFKASLFMAAGIIDHET---------GTRDMRRLSGLRRLMPITATLAMVA 375
|
410 420 430
....*....|....*....|....*....|....*...
gi 1583107296 402 TLSLCGIPPLACFWSK----DEILADSWLyfPILGWIA 435
Cdd:PRK12648 376 AAAMAGVPLLNGFLSKemffAETLDTHLL--GSLDWLL 411
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
114-456 |
2.53e-63 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 222.04 E-value: 2.53e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 114 YMSHDQGYVRFFAYLSLPNASMSGLVLSPNLIQIYIFRELVGMCSYLLIGFWFTRPSAANACQKAFITNRVGDFGLLLGT 193
Cdd:MTH00108 107 YMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAM 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 194 SGFYWIIGSFKFEDLFerfnesLANHEVSFFfatpcALL-FLLGPVAKSAQFPLHVWLPDAMEGPTPISAPIHAATMVAA 272
Cdd:MTH00108 187 AWFLLNLNSWDLQQIF------MLNPNNSNL-----PLMgLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVA 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 273 GIFLVARMLPLLKALPLVMSPISWVGGITASLGATIALAQKDLKRILAYSTMSQLGYMMLASGIGSSRAALFHLITHAYP 352
Cdd:MTH00108 256 GVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFF 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 353 KALLSPGSGSVIHSMepivgycpDKSQNIALMGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSKDEIL-------ADSW 425
Cdd:MTH00108 336 KAMLFMCSGSIIHNL--------NDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIeaantsyTNAW 407
|
330 340 350
....*....|....*....|....*....|.
gi 1583107296 426 LYFPILgwIArftAGLTGFYMFRMYFLTLEG 456
Cdd:MTH00108 408 ALLITL--IA---TSLTAAYSTRIIFFALLG 433
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
12-422 |
1.17e-60 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 211.76 E-value: 1.17e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 12 PLFPLLSSII-IGLGLLFFPKATRSFRRIYAIISTLLLSIAMVFSFHFFlqQITGNSTYRYSWSWipnqNVTSEVGYLID 90
Cdd:PRK06525 1 ENLALLTLLLpFIGALVVFFLPGRRAAELGVLFAALTTLCMLSLAYAFY--QAGKVAVTLTLVNL----GDVALFGLVID 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 91 PLTSIMLVLVTTIGVMVMIHSDSYMS-------HDQGYVRFFAYLSLPNASMSGLVLSPNLIQIYIFRELVGMCSYLLIG 163
Cdd:PRK06525 75 PVSVLIGFVVVLLGLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALIS 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 164 FWFTrPSAANACQKAFITNRVGDFGLLLGTSGFYWIIGSFKFEDLferfnESLANHEVSFFFatpcaLLFLLGPVAKSAQ 243
Cdd:PRK06525 155 YYQS-PKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSAL-----SGLHGSLKYLVF-----LGILFAAWGKSAQ 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 244 FPLHVWLPDAMEGPTPISAPIHAATMVAAGIFLVARMLPLLKALPLVmspISWVGGITASLGATIA----LAQKDLKRIL 319
Cdd:PRK06525 224 LPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPIPHV---IGYVGAVMAIVTLLYGflmyLPQQDMKRLL 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 320 AYSTMSQLGYMMLASGI---GSS---RAALFHLITHAYPKALLSPGSGSVIHSMepivgycpdKSQNIALMGGLRKYMPI 393
Cdd:PRK06525 301 AYSTITQLGYMFFGLSLailGSRlalEGSIAYIFNHAFAKSLFFLVAGALSYSC---------GTRLLPRLRGVLKKLPL 371
|
410 420
....*....|....*....|....*....
gi 1583107296 394 TGTTFLLGTLSLCGIPPLACFWSKDEILA 422
Cdd:PRK06525 372 VGVGFCVAALAITGVPPFNGFFSKFPIFA 400
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
16-418 |
1.28e-59 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 215.77 E-value: 1.28e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 16 LLSSIIIGLGLLFFPKATRSFRRIYAIISTLLLSIAMVFsFHFFLQQITGNSTYRYSWSWIPNQNVtsEVGYLIDPLTSI 95
Cdd:PRK12646 6 LLIAILVIMAMILLTSKRRALAKYAGYIALVAPIISSIY-FLIQIPSVAKLQYLSTSIPWMKTLDI--NLDLRLDGLSLM 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 96 MLVLVTTIGVMVMIHSDSYMSHDQGYV-RFFAYLSLPNASMSGLVLSPNLIQIYIFRELVGMCSYLLIGFWFTRPSAANA 174
Cdd:PRK12646 83 FSLIISLIGIAVFFYATQYLSSRKDNLpRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 175 CQKAFITNRVGDFGLLLGTSGFYWIIGSFKFEDLFERFNeSLANHEvsffFATPCALLFLLGPVAKSAQFPLHVWLPDAM 254
Cdd:PRK12646 163 AIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQAD-HIKNHG----LFIPMIFMFLLGAFTKSAQFPFHIWLPRAM 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 255 EGPTPISAPIHAATMVAAGIFLVARMLPLLKALPLVMSPISWVGGITASLGATIALAQKDLKRILAYSTMSQLGYMMLAS 334
Cdd:PRK12646 238 AAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMV 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 335 GIGSSR-----------------AALFHLITHAYPKALLSPGSGSVIHSMepivgycpdKSQNIALMGGLRKYMPITGTT 397
Cdd:PRK12646 318 GIGGGYaqhqqdaiasiyvfvlfAALFHLMNHAIFKCALFMGVGIIDHEA---------GTRDIRILSGMRQLFPKMNLV 388
|
410 420
....*....|....*....|.
gi 1583107296 398 FLLGTLSLCGIPPLACFWSKD 418
Cdd:PRK12646 389 MTIAALSMAGVPFLNGFLSKE 409
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
15-418 |
2.01e-58 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 212.00 E-value: 2.01e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 15 PLLSSIIIGLGLLFFPKATRSFRRIYAIISTLLLSIAMVFSFHfflqqitgNSTYRYSWSWIPNQNVtsEVGYLIDPLTS 94
Cdd:PRK12649 14 PFILAWTVPVLEKVLKQRIGWFAAAIAFTSFALIAQVAPEVIH--------GTIITGSISWLPSAGV--EFSIYADGLAV 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 95 IMLVLVTTIGVMVMIHSDSYMSHDQGYVRFFAYLSLPNASMSGLVLSPNLIQIYIFRELVGMCSYLLIGFWFTRPSAANA 174
Cdd:PRK12649 84 LIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIGYWRHRPESVYG 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 175 CQKAFITNRVGDFGLLLGTSGFYWIIGSFKFEDLFERFNESLANHEVSFFFATpcALLFLLGPVAKSAQFPLHVWLPDAM 254
Cdd:PRK12649 164 ATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELIENIKGHPLFLIT--LILIFIGAAAKSAQGPFYIWLPNAM 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 255 EGPTPISAPIHAATMVAAGIFLVARMLPLLKALPLVMSPISWVGGITASLGATIALAQKDLKRILAYSTMSQLGYMMLAS 334
Cdd:PRK12649 242 EAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLAYLMTMY 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 335 GIGSSR-------AALFHLITHAYPKALLSPGSGSVIHSMepivgycpdKSQNIALMGGLRKYMPITGTTFLLGTLSLCG 407
Cdd:PRK12649 322 GYTTYHepglgvaAATFHLLNHATFKACLFLVAGIVAHEA---------ATRDIRKLGGLRKEMPITFIVASIAALAMAG 392
|
410
....*....|.
gi 1583107296 408 IPPLACFWSKD 418
Cdd:PRK12649 393 IPPLNGFLSKE 403
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
70-438 |
2.58e-56 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 207.85 E-value: 2.58e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 70 RYSWSWIPNQNVtsEVGYLIDPLTSIMLVLVTTIGVMVMIHSDSYMSHD-QGYVRFFAYLSLPNASMSGLVLSPNLIQIY 148
Cdd:PRK12644 55 TEVVPWIPSLGL--DLAFRLDALAALMSLLVLGVGALVLLYCARYFDDDePRLGRFAAELVAFAGAMFGLVTSDNLLLLY 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 149 IFRELVGMCSYLLIGFWFTRPSAANACQKAFITNRVGdfGL-------LLGTSGfywiiGSFKFEDLFERFNESLAnhev 221
Cdd:PRK12644 133 VFWELTTVLSFLLIGHYAERAASRRAALQALLVTTAG--GLamlvgiiILGQAA-----GTYRLSELLADPPTGPA---- 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 222 sfffATPCALLFLLGPVAKSAQFPLHVWLPDAMEGPTPISAPIHAATMVAAGIFLVARMLPLLKALPlvmspiSW----- 296
Cdd:PRK12644 202 ----VSVAVVLILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVP------VWrptvl 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 297 -VGGITASLGATIALAQKDLKRILAYSTMSQLGYMMLASGIGSSRAALFHL---ITHAYPKALLSPGSGSVIHSmepiVG 372
Cdd:PRK12644 272 vLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLamlLAHALFKAALFLVVGIIDHS----TG 347
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1583107296 373 ycpdkSQNIALMGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSKDEILaDSWLYFPILGWIARFT 438
Cdd:PRK12644 348 -----TRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAKEAAL-EAVLHDGALGPAGPVV 407
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
42-466 |
9.11e-55 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 197.67 E-value: 9.11e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 42 IISTLLLSIAMVFSFHFFLQQITGNSTYRYSWSWIPNQNVTSEVGYLIDPLTSIMLVLVTTIGVMVMIHSDSYMSHDQGY 121
Cdd:MTH00165 5 LISFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDKNI 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 122 VRFFAYLSLPNASMSGLVLSPNLIQIYIFRELVGMCSYLLIgFWFTRPSAANACQKAFITNRVGDFGLLLGTSGFYwIIG 201
Cdd:MTH00165 85 NRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLV-IYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMM-NFG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 202 SFKFedLFerFNESLANHEVSFFFAtpcaLLFLLGPVAKSAQFPLHVWLPDAMEGPTPISAPIHAATMVAAGIFLVARML 281
Cdd:MTH00165 163 SWNF--IF--YLDFMKNSFEMLLIG----LLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFN 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 282 PLLKaLPLVMSPISWVGGIT---ASLGATIalaQKDLKRILAYSTMSQLGYMMLASGIGSSRAALFHLITHAYPKALLSP 358
Cdd:MTH00165 235 NLLF-SSFFSKFLLLISLLTmfmAGLGANF---EFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFL 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 359 GSGSVIHSMepivgycpDKSQNIALMGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSKD---EILADSWLYFPILgWIA 435
Cdd:MTH00165 311 CAGSIIHNM--------SNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDlilEMVSMSNLNFFIF-FLF 381
|
410 420 430
....*....|....*....|....*....|.
gi 1583107296 436 RFTAGLTGFYMFRMYFLTLEGDFRANSSKNV 466
Cdd:MTH00165 382 FFSTGLTVSYSFRLIYYSMSGDFNLKSLNNL 412
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
40-469 |
1.16e-54 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 197.18 E-value: 1.16e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 40 YAIISTLLLSIAMVFSFHFFLQQITGNSTYRYSWSWIPNQNVTSEVGYLIDPLTSIMLVLVTTIGVMVMIHSDSYMSHDQ 119
Cdd:MTH00209 1 FKKMQMFSLMLLFLFSFLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 120 GYVRFFAYLSLPNASMSGLVLSPNLIQIYIFRELVGMCSYLLIGFWFTRPSAAnACQKAFITNRVGDFGLLLGTSGFYwI 199
Cdd:MTH00209 81 FKKRFILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSKSLS-AGMLTALTNRVGDALLILSIAWML-M 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 200 IGSFKFedLFERFNESlanhevsffFATPCALLFLLGPVAKSAQFPLHVWLPDAMEGPTPISAPIHAATMVAAGIFLVAR 279
Cdd:MTH00209 159 HGNWNI--FYLNFNSN---------LGSVISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIR 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 280 MLPLLKALPLVMSPISWVGGITASLGATIALAQKDLKRILAYSTMSQLGYMMLASGIGSSRAALFHLITHAYPKALLSPG 359
Cdd:MTH00209 228 FFPSLFSSPFFSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFIC 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 360 SGSVIHSMEpivgycpdKSQNIALMGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSKDEILaDSWLY--FPILGWIARF 437
Cdd:MTH00209 308 AGNIIHSHG--------HSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLIL-ESMLEsnMPIMTLILMF 378
|
410 420 430
....*....|....*....|....*....|...
gi 1583107296 438 TA-GLTGFYMFRMYFLTLEGdfrANSSKNVISS 469
Cdd:MTH00209 379 LStSLTAAYSMRLSYFSLWG---PNSSKSLNSS 408
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
41-449 |
1.36e-52 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 191.90 E-value: 1.36e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 41 AIISTLLLSIAMVFSFHFFLQQITGNSTYRYSWSWIPNQNVTSEVGYLIDPLTSIMLVLVTTIGVMVMIHSDSYMSHDQG 120
Cdd:MTH00207 7 SSIASYLLWFMSILMFPLSLYLMMCNKTILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDKF 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 121 YVRFFAYLSLPNASMSGLVLSPNLIQIYIFRELVGMCSYLLIgFWFTRPSAANACQKAFITNRVGDFGLLLGT----SGF 196
Cdd:MTH00207 87 LSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILV-IYYQNPKSLGAGMITALTNRIGDVMLLLSIgwtlNQG 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 197 YWIIGSFKFEDlferfneslanhevsffFATPCALLFLLGPVAKSAQFPLHVWLPDAMEGPTPISAPIHAATMVAAGIFL 276
Cdd:MTH00207 166 HWSITNMWQTD-----------------MNNYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFL 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 277 VARMLPLLKALPLVMSPISWVGGITASLGATIALAQKDLKRILAYSTMSQLGYMMLASGIGSSRAALFHLITHAYPKALL 356
Cdd:MTH00207 229 LIRFYPFLSSTYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALL 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 357 SPGSGSVIHSMEpivgycpdKSQNIALMGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSKDEILaDSWLYFP---ILGW 433
Cdd:MTH00207 309 FVCAGSLIHSHH--------HSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLIL-ESSLFYPhnsLMIL 379
|
410
....*....|....*.
gi 1583107296 434 IARFTAGLTGFYMFRM 449
Cdd:MTH00207 380 MIFLATALTAAYSTRF 395
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
11-452 |
1.45e-52 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 190.57 E-value: 1.45e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 11 IPLFPLLSSIIIGLgLLFFPKATRSFRRIYAIISTLllsIAMVFSFHFFLQQITGNSTYRYSWS-WIPNQNVTsevgYLI 89
Cdd:PRK12667 9 TPILLVLFAFLLPL-LSILLKGNRKIQKIYALLVSL---ITLILSILLFIQVYSSNKPIVYLFGgWPAPIGIV----YEV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 90 DPLTSIMLVLVTTIGVMVMIHSDSYMSHDQGYVRFFAYLSLPNASMSGLVLSPNLIQIYIFRELVGMCSYLLIGFWFTRP 169
Cdd:PRK12667 81 DLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 170 SAANACQKAFITNRVGDFGLLLGTSGFYWIIGSFKFEDLferfneSLANHEVSFFFATP-----------CALLFLLGPV 238
Cdd:PRK12667 161 DAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADL------SAKIRGLSFPLTGGlagnpplalgvALALALWAFT 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 239 AKSAQFPLHVWLPDAM-EGPTPISApIHAATMVAAGIFLVARML--------PLLKALPLVMSPISWVGGITASLGATIA 309
Cdd:PRK12667 235 IKAAIFPNHFWLPDAHpAAPSPVSA-MLSGLVVNVGAYAIIRFLytifgispSLIDFRAALSPILIILGAVSAIIGALMM 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 310 LAQKDLKRILAYSTMSQLGYMMLASGIGSS---RAALFHLITHAYPKALLSPGSGSVIHSMepivgycpdKSQNIALMGG 386
Cdd:PRK12667 314 VVQKDVKRLLAYSTISHMGYIFMGIGIGTQlglAAALFHIINHAIAKSLLFLASGVFIHAA---------GTRDIDELAG 384
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1583107296 387 LRKYMPITGTTFLLGTLSLCGIPPLACFWSKdEILADSWLY--FPILGWIARFTAGLTGFYMFRMYFL 452
Cdd:PRK12667 385 LGRKMPIASFAFLIGALSLVGIPPLNGFFSK-LLLFNALLEsgFYLPALVLLIASAISLVGYFRAWYS 451
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
14-450 |
7.81e-52 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 187.60 E-value: 7.81e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 14 FPLLSSIII-----GLGLLFFPKATRSFRRIYAIIS---TLLLSIAMVFSFHFFlqqiTGNSTYRYSWSWIPNQNVTSEV 85
Cdd:COG1008 3 MPLLSLLILlpllgALLLLLLPRRNARLARWVALAVsllTLLLSLYLLAGFDPG----TGGFQFVESYPWIPSLGISYHL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 86 GylIDPLTSIMLVLVTTIGVMVMIHSDSYMSHDQGyvRFFAYLSLPNASMSGLVLSPNLIQIYIFRELVGMCSYLLIGFW 165
Cdd:COG1008 79 G--VDGISLPLVLLTALLTPLAILASWNEIKKRPK--LYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIW 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 166 --FTRPSAANacqKAFITNRVGDFGLLLGTSGFYWIIGSFKFeDLFErfnesLANHEVSFFFATPCALLFLLGPVAKSAQ 243
Cdd:COG1008 155 ggERRIYAAI---KFFLYTLAGSLLMLVAILALYFLAGALTF-DIAE-----LAAAPLPLTAQLLLFLAFFIAFAVKVPM 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 244 FPLHVWLPDA-MEGPTPISApIHAATMVAAGIFLVAR-MLPLLKALPLVMSP-ISWVGGITASLGATIALAQKDLKRILA 320
Cdd:COG1008 226 FPFHTWLPDAhVEAPTAGSV-LLAGVLLKMGGYGLLRfALPLFPEASAYFAPlLAALGVIGIIYGALVALAQTDLKRLIA 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 321 YSTMSQLGYMMLASGIGSSRA---ALFHLITHAYPKALLSPGSGSVIHSMepivgycpdKSQNIALMGGLRKYMPITGTT 397
Cdd:COG1008 305 YSSVSHMGFVLLGIFALNPLGlqgAVLQMVSHGLITAALFLLVGVLYDRT---------HTRDIADLGGLAKRMPVLAAL 375
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 1583107296 398 FLLGTLSLCGIPPLACFWSKDEILADSWLYFPILGWIARFTAGLTGFYMFRMY 450
Cdd:COG1008 376 FLLAALASLGLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMY 428
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
43-473 |
2.74e-51 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 187.74 E-value: 2.74e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 43 ISTLLLSIAMVFSFHFFLQQITGNSTYRYSWSWIPNQNVTSEVGYLIDPLTSIMLVLVTTIGVMVMIHSDSYMSHDQGYV 122
Cdd:MTH00151 6 LSSFLLFSYSVFLFPLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLK 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 123 RFFAYLSLPNASMSGLVLSPNLIQIYIFRELVGMCSYLLIGFWFTRPSAANACQKAFiTNRVGDFGLLLGTSGFYwIIGS 202
Cdd:MTH00151 86 RFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTAL-TNRIGDVLILLSIALLV-LLGH 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 203 FKFEDLFErfneslanhevsFFFATPCALLFLLGPVAKSAQFPLHVWLPDAMEGPTPISAPIHAATMVAAGIFLVARMLP 282
Cdd:MTH00151 164 WSILSMWD------------FKLSGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFP 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 283 LLKALPLVMSPISWVGGITASLGATIALAQKDLKRILAYSTMSQLGYMMLASGIGSSRAALFHLITHAYPKALLSPGSGS 362
Cdd:MTH00151 232 FLSSSSGFSSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGS 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 363 VIHSMepivgycpDKSQNIALMGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSKDEILADSwlYFPILGWIARFT---- 438
Cdd:MTH00151 312 IIHSS--------SGTQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESS--LMSPTSLLMVLLmfvg 381
|
410 420 430
....*....|....*....|....*....|....*..
gi 1583107296 439 AGLTGFYMFRMYFLTLEGDFRAN--SSKNVISSYVSL 473
Cdd:MTH00151 382 VGLTALYSARLSFCLVWGSMKSSslSSKSDEDFYVSL 418
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
11-442 |
2.25e-47 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 176.06 E-value: 2.25e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 11 IPLFPLLSSIIIGLgllffpkATRSFRRIYAIISTLLLSIAMVFSFHfflqQITGNSTYRYSWSwIPNQNVTSEVGYL-- 88
Cdd:PRK08376 13 IPLFGAFSMPIVSL-------LGGKAREIWAVLISFLTLIVALLVFY----EVWNNGTIVYVLG-AESPTLTLPFGSGgf 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 89 -------IDPLTSIMLVLVTTIGVMVMIHSDSYMSHDQGYVRFFAYLSLPNASMSGLVLSPNLIQIYIFRELVGMCSYLL 161
Cdd:PRK08376 81 piriiweVDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYAL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 162 IGFWFTRPSAANACQKAFITNRVGDFGLLLGTSGFYWIIGSFKFEDLFERFNESLANHEVSfffatpcALLFLLGPVA-K 240
Cdd:PRK08376 161 VAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVKMSENPTVVAKI-------ALALFIAGLAmK 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 241 SAQFPLHVWLPDAM-EGPTPISAPIHAATmvAAGIFLVARMLPLLKALPLVMSPISWV----GGITASLGATIALAQKDL 315
Cdd:PRK08376 234 SGAVPVHMWLPDAYpAAPSSISAMLLVIK--QAGLYALARVLFSIYGPAINLATVGWViiilGCLTMFVGVAMAVVQKDV 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 316 KRILAYSTMSQLGYMMLASGIG---------------SSRAALFHLITHAYPKALLSPGSGSVIHSMepivgycpdKSQN 380
Cdd:PRK08376 312 KRLLAYHSVSQIGYMLLGLGVGlaalgdpamasygeiALAGGIYHIVNHALYKALLFLTAGAVIYET---------GTRN 382
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1583107296 381 IALMGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSKDEILADSWLYFPILGWIARFTAGLT 442
Cdd:PRK08376 383 LNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSVLT 444
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
7-417 |
9.78e-45 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 167.75 E-value: 9.78e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 7 YGWMIPLF---PLLSSIIIglglLFFPKaTRSFRRIYAIIsTLLLSIAMVFSFhffLQQITGNSTYRYS-WSWIPNQNVT 82
Cdd:PRK08375 2 ISHLLPLLvavPLLAAALI----VLLPK-RRRLRWALALL-VAALTFALAISL---LPQVLDGGVIAYVvGGWPPGIGIE 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 83 sevgYLIDPLTSIMLVLVTTIGVMVMIHSDSYMSHDQgyVRFFAYLSLPNASMSGLVLSPNLIQIYIFRELVGMCSYLLI 162
Cdd:PRK08375 73 ----LRADSLSALFLLVTSILAIAALLYAIGYGEHRQ--TRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALV 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 163 GFWFTRpSAANACQKAFITNRVGDFGLLLGTSGFYWIIGSFKFEDLFERFnesLANHEVSFFFAtpcalLFLLGPVAKSA 242
Cdd:PRK08375 147 AMGGDR-RALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGAL---AENPTVVTAFG-----FVLLALALKAA 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 243 QFPLHVWLPDAMEGPTPISAPIHAATMVAAGIFLVARML-----PLLKALPLVMSPISWVGGITASLGATIALAQKDLKR 317
Cdd:PRK08375 218 VFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYftvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKR 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 318 ILAYSTMSQLGYMMLASGIGSSR---AALFHLITHAYPKALLSPGSGSVihsmepivgYCPDKSQNIALMGGLRKYMPIT 394
Cdd:PRK08375 298 VLAYSTVSQMGYILLGLALLTPLalaAGLLHLLHHALMKGALFLAAGAI---------EVTYGTRRLSELSGLGRRMPLT 368
|
410 420
....*....|....*....|...
gi 1583107296 395 GTTFLLGTLSLCGIPPLACFWSK 417
Cdd:PRK08375 369 AAAFAVASLSLIGVPPTSGFVSK 391
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
60-447 |
3.52e-44 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 171.38 E-value: 3.52e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 60 LQQITGNSTYRYSWSWIPN---QNVTSEVGYLIDPLTSIMLVLVTTIGVMVMIHSDSYMSHDQGYVRFFAYLSLPNASMS 136
Cdd:PRK12650 45 LPPILDGDALTWSVTWIPDllgNGVDVNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAML 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 137 GLVLSPNLIQIYIFRELVGMCSYLLIGFwfTRPSAANACQKAFITNRVGDFGLLL---------GTSGFYWIIGSfkfed 207
Cdd:PRK12650 125 LLVLADDVVVLFVAWELVSLASFFLIAR--SGSGGEAGSIRTLILTFFGGLTLLAavaiaatqtGTTSLSGILHS----- 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 208 lferfnESLANHEVsffFATPCALLFLLGPVAKSAQFPLHVWLPDAMEGPTPISAPIHAATMVAAGIFLVARMLPLLKAL 287
Cdd:PRK12650 198 ------DVWAEKPG---LTTVVAVLIAVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDV 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 288 PLVMSPISWVGGITASLGATIALAQKDLKRILAYSTMSQLGYMMLASGIGSS---RAALFHLITHAYPKALLSPGSGSVI 364
Cdd:PRK12650 269 AVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPfalTAAVVHTLAHALFKSSLFMLIGVVD 348
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 365 HSMepivgycpdKSQNIALMGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSKdEILADSWLYFPI---LGWIARFTAGL 441
Cdd:PRK12650 349 HQA---------GTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSK-EGMLTAFLEAPGgnaGVVLLLVGAAL 418
|
....*.
gi 1583107296 442 TGFYMF 447
Cdd:PRK12650 419 GAVFTF 424
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
10-459 |
3.71e-39 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 154.28 E-value: 3.71e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 10 MIPLFPLLSSII----IGLGLLFFPKATRSFRRIYAIISTLLLSIAMVFSFHFFLQQITGNSTYRYSWSWIPNQnvtsev 85
Cdd:PRK06521 2 MLALQLLLLSLLlylaLGLAGLLLLRRPRLAIRLSGPTGLLGGLLGLASGLTALFAGPTLAAVLPLGLPFLPFH------ 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 86 gYLIDPLTSIMLVLVTTIGVMVMIHSDSYMSHDQGY----VRFFAYLSLpnASMSGLVLSPNLIQIYIFRELVGMCSYLL 161
Cdd:PRK06521 76 -LRLDALSAFFLLVISLLGAAASLYSLGYFREYEGKgpgaMGFFYNLFL--ASMVLVLLADDAFSFLVAWETMSLSSWFL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 162 IGFWFTRPSAANACQKAFITNRVGDFGLLLGTSGFYWIIGSFKFEdlferfneSLANHEVSFFFATPCALLFLLGPVAKS 241
Cdd:PRK06521 153 VIANHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFA--------AMRAAHLSPFWASLVFLLALFGFGAKA 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 242 AQFPLHVWLPDAM-EGPTPISApIHAATMVAAGIFLVARMlpllkALPLVMSPISW-------VGGITASLGATIALAQK 313
Cdd:PRK06521 225 GLVPLHVWLPRAHpAAPSHVSA-LMSGVMLKVAIYGILRV-----VFDLLGAPGWWwgvlvlaLGAISAVLGVLYALAEH 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 314 DLKRILAYSTMSQLGYMMLASGIG--------------SSRAALFHLITHAYPKALLSPGSGSVIHSMEpivgycpdkSQ 379
Cdd:PRK06521 299 DLKRLLAYSTIENIGIIFVGLGLAmvfiaygmpllaalALTAALYHLLNHALFKSLLFLGAGAVLHATG---------TR 369
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 380 NIALMGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSKdeiladsWLYF------------------PILGWIARFTAGL 441
Cdd:PRK06521 370 DMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSE-------WLLLqsllsspglpqwglklavPIAAAMLALTAAL 442
|
490
....*....|....*...
gi 1583107296 442 TGFYMFRMYFLTLEGDFR 459
Cdd:PRK06521 443 AAMCFVKFYGITFLGRPR 460
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
14-450 |
1.44e-37 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 146.62 E-value: 1.44e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 14 FPLLSSIIIglglLFFPKATRSFRRIYAIIS---TLLLSIAMVFSFHfflqqiTGNSTYRY--SWSWIPNQNVTSEVGyl 88
Cdd:TIGR01972 7 LPLIGALLI----LLLPSNKDGKARWIALVValaTLLLSLLLLFQFD------PTGSGFQFteDIPWIPALGISYHLG-- 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 89 IDPLTSIMLVLVTTIGVMVMIHSDSYMSHDQGYvrFFAYLSLPNASMSGLVLSPNLIQIYIFRELVGMCSYLLIGFWfTR 168
Cdd:TIGR01972 75 VDGISLLLVLLTALLTLLAILASWESIQKRVKE--FYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVW-GG 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 169 PSAANACQKAFITNRVGDFGLLLGTSGFYWIIG-SFKFEDLferfneslANHEVSFFFATPCALLFLLGPVAKSAQFPLH 247
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGgTFDLLEL--------LNLPLPFGVQTWLFLAFFIAFAVKVPLFPLH 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 248 VWLPDAM-EGPTPISaPIHAATMVAAGIFLVARM-LPLLKALPLVMSP-ISWVGGITASLGATIALAQKDLKRILAYSTM 324
Cdd:TIGR01972 224 TWLPDAHvEAPTAGS-VILAGVLLKMGTYGFLRFnLPLFPDASLYFAPvLAALGVIAIIYGALIALAQTDIKRLIAYSSI 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 325 SQLGYMMLASGIGSSRA---ALFHLITHAYPKALLSPGSGSVIHSMepivgycpdKSQNIALMGGLRKYMPITGTTFLLG 401
Cdd:TIGR01972 303 SHMGFVLLGIFSFNELGisgAVFQMISHGLITAALFLLVGVLYERA---------HTRDIAKYGGLANKMPVLAAFFMLF 373
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 1583107296 402 TLSLCGIPPLACFWSKDEILADSWLYFPILGWIARFTAGLTGFYMFRMY 450
Cdd:TIGR01972 374 AMASLGLPGTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
14-450 |
7.49e-36 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 141.88 E-value: 7.49e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 14 FPLLSSIII-----GLGLLFFPKATRSFRRIYAIISTLL-LSIAMVFSFHFFLQQITGNSTYRYSWswIPNQNVTSEVGy 87
Cdd:PRK05846 3 WPLLSLLIFlpligGLLVLLTERFGARLARWIALIGTLLtLLLSLVLWIGFDSSNAGFQFVEKHPW--IPRFGISYHLG- 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 88 lIDPLTSIMLVLVTTIGVMVMIHSDSYMSHDQGyvRFFAYLSLPNASMSGLVLSPNLIQIYIFRE--LVGMcsYLLIGFW 165
Cdd:PRK05846 80 -VDGISLLLVVLTALLTPLAVLASWEEIKKRVK--FYMAALLWLEGGVIGVFAALDLLLFYVFFEamLIPM--YFLIGVW 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 166 --FTRPSAANacqKAFITNRVGDFGLLLGTSGFYWI----IGSFKFEDLferfneslANHEVSFFFATPCALLFLLGPVA 239
Cdd:PRK05846 155 ggKNRIYAAT---KFFLYTLLGSLLMLVAIIYLVVVyynaTGTFDIADL--------LNLPLPPGVQYWLFLAFFIAFAV 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 240 KSAQFPLHVWLPDAM-EGPTPISApIHAATMVAAGIF-LVARMLPLLKALPLVMSPISWVGGITASL-GATIALAQKDLK 316
Cdd:PRK05846 224 KMPMFPLHTWLPDAHvQAPTAGSV-LLAGILLKMGAYgLLRFSLPLFPDASHEFAPIIITLGVIAIIyGALVALAQTDIK 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 317 RILAYSTMSQLGYMMLASGIGSSRA---ALFHLITHaypkallspgsGSVIHSMEPIVGYCPDK--SQNIALMGGLRKYM 391
Cdd:PRK05846 303 KLIAYSSISHMGFVTLGIFAGNQLGiqgAIFQMISH-----------GLSSAALFLLVGVLYDRlhTRDIADYGGLAKVM 371
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 1583107296 392 PITGTTFLLGTLSLCGIPPLACFWSKDEILADSWLYFPILGWIARFTAGLTGFYMFRMY 450
Cdd:PRK05846 372 PVLAAFFLFFAMASLGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLY 430
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
10-360 |
1.68e-35 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 141.37 E-value: 1.68e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 10 MIPLFPLLSSIIIGLGLLFFPKATRSFRRIYAIISTLLLSIAMVFsfhfflqqitgNSTYRYSWSWIPNQNVTsevgylI 89
Cdd:PRK08168 5 VCALLPAVLMSLAAGGLLLSRWLTRALWRIAQAASLAGLFLALLG-----------LVLFATGAAWPAAAWLE------V 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 90 DPLTSIMLVLVTTIGVMVMIHSDSYMSHDQGYVRFFAYLSLPNASMSGLVLSPNLIQIYIFRELVGMCSYLLIGFWFTRP 169
Cdd:PRK08168 68 SGLGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRP 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 170 SAANACQKAFITNRVGDFGLLLGTSGFYWIIGSFKFEDLFERFNESLANHEVSFffatpCALLFLLGPVAKSAQFPLHVW 249
Cdd:PRK08168 148 FARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLSALWAHLAAQGASPSLQA-----AALLLVLAVILKTAQLPVHGW 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 250 LPDAMEGPTPISAPIHAAtMVAAGIFLVARMLPLLKALPLVMSPISWVGGITASLGATIALAQKDLKRILAYSTMSQLGY 329
Cdd:PRK08168 223 LIQVMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGF 301
|
330 340 350
....*....|....*....|....*....|...
gi 1583107296 330 MMLASGIGSSRAALFHLITHAYPKA--LLSPGS 360
Cdd:PRK08168 302 MLLECGLGLYELALLHLVAHSLYKAhaFLSASE 334
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
11-448 |
1.06e-33 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 137.05 E-value: 1.06e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 11 IPLFPLLSSIIIGLGllffpkatRSFRRIYAIISTLLLSIaMVFSFHFFLQQITGNStyrySWSWIPNQNVTSEVGYLID 90
Cdd:PRK08668 6 LLLTPLIGSVLAYLL--------KKINEKIGVIGNALPLL-FLIKLYFTLKVGTGEK----LTLFFGGFKLTFTLTHLSW 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 91 PLTSIMLVlvttIGVMVMIHSDSYMSHDQGYVRFFAYLSLpnASMSGLVLSPNLIQIYIFRELVGMCSYLLIgfWFTRPS 170
Cdd:PRK08668 73 FFAMISLL----VIFSVAFFMVSEKTKNDAYFNMFALMSL--AGVLGVFLANDLLTLYIFWEIMTFSSFMMV--PMGKKE 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 171 AANACQKAFITNRVGDFGLLLGTSGFYWIIGSFKFEDLFERFNEslanhEVSFFFATPCALLFLLGPVAKSAQFPLHVWL 250
Cdd:PRK08668 145 SRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFADISQGLIN-----DTSTGFALIVFLFLLAFGVAKAGIFPLHVWA 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 251 PDAM-EGPTPISAPIHAA--TMVAAGIFLVARMLPLLKAL---------PLVMSPISWVGGITASLGATIALAQKDLKRI 318
Cdd:PRK08668 220 PDAYsEAPQSFSAVLSGQlsKLGAYGFLLVLYVLPGTKLFsefgtyrgvPLFNYILAWLGNISIIVGTLMAILQEDIKKL 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 319 LAYSTMSQLGYMMLASGIGSS---RAALFHLITHAYPKALLSPGSGSVIHSMepivgycpdKSQNIALMGGLRKYMPITG 395
Cdd:PRK08668 300 IAYSSVANGGYILVGLGLGTSlgfAGGLFHVFNHALFKGLFFLIFAAVIYRT---------GTTKISEMGGLIEKMPFTF 370
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1583107296 396 TTFLLGTLSLCGIPPLACFWSKdeiladsWLYF--------PILGWIARFTAGLTGFYMFR 448
Cdd:PRK08668 371 AMYLVAIISLAGIPPMSGFASK-------WLIFealiskgmPITAFMAFFGSIGSFLYVFR 424
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
10-421 |
3.98e-33 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 133.54 E-value: 3.98e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 10 MIPLFPLLSSIIIGLG--LLFFPKATRSFRRIYAIIStLLLSIAMVFSfhfflqqitgnsTYRYSWSWIPNQNVTsevgY 87
Cdd:PRK07234 1 MTSLTPVWIALPFLLGfaIYLLPKLDRNLALGMAIVS-AVYALGLVAS------------MVPLELTLLDNFGVT----L 63
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 88 LIDPLTSIMLVLVTTIGVMVMIHSdsyMSHDQGYVrFFAYLSLPNASMSGLVLSPNLIQIYIFRELVGMCSYLLIGFWFT 167
Cdd:PRK07234 64 RADALSGYFILTNALVTLAVIFYC---WESAKTRF-FYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVAYPRT 139
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 168 RPSAANACQKAFITNRVGDFgLLLGTSGFYWIIGSFKFEDLferfneSLANHEVSfffatpcALLFLlGPVAKSAQFPLH 247
Cdd:PRK07234 140 DRAIWVGLRYLFYSNVAMLF-YLIGAVLVYQANGTFAFSGL------ATADPEAF-------ALIAL-GLLVKGGIFVSG 204
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 248 VWLPDAMEGPTPISAPIHAATMVAAGIFLVARMLPLLKALPLvmsPISWVGGITASLGATIALAQKDLKRILAYSTMSQL 327
Cdd:PRK07234 205 LWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDL---IVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQL 281
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 328 GYMMLASGIGssraALFHLiTHAYPKALLSPGSGsVIHSMepivgycpDKSQNIALMGGLRKYMPITgttflLGTLSLCG 407
Cdd:PRK07234 282 GFILAAPLVG----GLYAL-AHGLVKSTLFLCAG-ALPSR--------NFTELISQMLGIGKWIPLT-----MASFSIAG 342
|
410
....*....|....
gi 1583107296 408 IPPLACFWSKDEIL 421
Cdd:PRK07234 343 FPLLAGFVSKVLTL 356
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
7-417 |
7.77e-33 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 132.55 E-value: 7.77e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 7 YGWMIPLFPLLSSIIIGLGL-LFFPKATRSFRRIYAIIsTLLLSIAMVFSFHFFLQQITGNSTYRyswswipnqnvtsev 85
Cdd:COG1007 4 LLALLPEIILLLGALVLLLLdLFLPRRSRRLLAGLALL-GLLLALALLLLALGGGTGTAFGGMFV--------------- 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 86 gylIDPLTSIMLVLVTTIGVMVMIHSDSYMSHDQGYVR-FFAYLSLPNASMSGLVLSPNLIQIYIFRELVGMCSYLLIGF 164
Cdd:COG1007 68 ---VDGFALFFKLLILLAALLVLLLSRDYLERRGLLRGeFYALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVAF 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 165 WFTRPSAANACQKAFITnrvGDFG---LLLGTSGFYWIIGSFKFEDLFERFNESLANHEVSFFfatpcALLFLLGPVA-K 240
Cdd:COG1007 145 RRDDRRSSEAALKYFLL---GALSsgfLLYGISLLYGATGSLNLAGIAAALAAGGANSPLLLL-----GLVLVLAGLAfK 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 241 SAQFPLHVWLPDAMEG-PTPISAPIHAATMVAAgIFLVARML-PLLKALPLVMSPI-SWVGGITASLGATIALAQKDLKR 317
Cdd:COG1007 217 LSAVPFHMWTPDVYEGaPTPVTAFLATAPKIAA-FAALLRLLvEAFPGLAADWQLLlAVLAVLSMTVGNLAALAQTNVKR 295
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 318 ILAYSTMSQLGYMML---ASGIGSSRAALFHLITHaypkALLSPGSGSVIHSMEPIVGYcpdkSQNIALMGGLRKYMPIT 394
Cdd:COG1007 296 MLAYSSIAHAGYLLLglaAGTPLGVSAALFYLLAY----LFMNLGAFAVILLLSRKGGE----AEEIEDLAGLARRSPLL 367
|
410 420
....*....|....*....|...
gi 1583107296 395 GTTFLLGTLSLCGIPPLACFWSK 417
Cdd:COG1007 368 ALAMTIFLLSLAGIPPTAGFFGK 390
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
1-417 |
8.83e-33 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 132.64 E-value: 8.83e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 1 MESIYKYGWMIPLFPLLSSIIIGLGL-LFFPKATRsfRRIYAIISTLLLSIAMVFSFHFFLQQITGNSTYRyswswipnq 79
Cdd:PRK05777 2 TITSLNLILLLPELILLGAAVVLLLIdAFVRRHSR--RATLAVLALLLALVALLFVLGAAGGGTAFGGMLV--------- 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 80 nvtsevgylIDPLTSIM--LVLVTTIGVMVMIHSDSymsHDQGYVRFFAYLSLPNASMSGLVLSPNLIQIYIFRELVGMC 157
Cdd:PRK05777 71 ---------VDGFALFLkgLILLASLLALLLARPYL---EDRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLP 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 158 SYLLIGFWFTRPSAANACQKAFItnrVGDFG---LLLGTSGFYWIIGSFKFEDLFERFNESLANHEVSFFfatpcALLFL 234
Cdd:PRK05777 139 LYALAALRRDRRRSLEAAIKYFV---LGALAsgfLLYGMSLLYGATGSLSFAGIAKALADGSGNSLLLLF-----GLVFL 210
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 235 LGPVA-KSAQFPLHVWLPDAMEG-PTPISAPIHAATMVAAGIFLVARMLPLLKALPLVMSPISWVGGI-TASLGATIALA 311
Cdd:PRK05777 211 LVGLAfKLSAVPFHMWTPDVYEGaPTPVTAFLATAPKIAAFAVLLRLLVVAFGGLSEDWQQVLAIIAIaSMLVGNLAALS 290
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 312 QKDLKRILAYSTMSQLGYMMLASGIGSS---RAALFHLIthAYpkALLSPGSGSVIHSMEpivgyCPDK-SQNIALMGGL 387
Cdd:PRK05777 291 QTNIKRLLAYSSIAHAGYLLVGLAAGTAegySAVLFYLL--AY--LFMTLGAFGVISLLR-----RKGGeAESISDFAGL 361
|
410 420 430
....*....|....*....|....*....|
gi 1583107296 388 RKYMPITGTTFLLGTLSLCGIPPLACFWSK 417
Cdd:PRK05777 362 SKRSPLLAAVMTIFMLSLAGIPPTAGFWGK 391
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
10-431 |
1.80e-30 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 125.81 E-value: 1.80e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 10 MIPLFPLLSSIIIGLGLLFFPKATRSFRRIYAIISTLLLSIAMVFsfhFFLQQITGNSTYRYSWswipnqnvtsevgYLI 89
Cdd:PRK06458 4 SILFALLLLIPLLASLLLFALRKRRLVATLNVLGITLTLILALWL---VFTVPDAGEIFAAGLW-------------FFI 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 90 DPLTSIMLVLVTTIGVMVMIHSDSYMSHDQ-------GYVRF-FAYLSLPNASMSGLVLSPNLIQIYIFRELVGMCSYLL 161
Cdd:PRK06458 68 DDLNVFFLALIGVVGFLTSLYSIGYMRHEVehgelspVTLRLyYGMYQLFLFTMLLALTSNNLGLMWVAIEATTLSSALL 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 162 IGFWFTRpSAANACQKAFITNRVGDFGLLLGTSGFYWIIGSFKFEDLFERFNESLANH---------EVSFFFAtpcall 232
Cdd:PRK06458 148 VGIYRTR-ASLEAAWKYIIICSVGVAFALFGTILVYANAATVMGDGEMAILWTELLKHaslldptlmKLAFVFL------ 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 233 fLLGPVAKSAQFPLHVWLPDA-MEGPTPISAPIHAATMVAAgIFLVARMLPLLKALPLVMSP---ISWVGGITASLGATI 308
Cdd:PRK06458 221 -LIGFGTKVGLFPMHAWLPDAhSEAPSPVSALLSGVLLNVA-LYAVLRYYILIDAAIGSDFPgrlLLIFGLLSVLVAAFF 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 309 ALAQKDLKRILAYSTMSQLGYMMLASGIGS---SRAALFHLITHAYPKALLSPGSGSVIHSMepivgycpdKSQNIALMG 385
Cdd:PRK06458 299 LLRQRDIKRLFAYSSIEHMGLIAFALGIGGplgIFAALLHMLNHSLTKSAIFFASGNVLQKY---------GTRDINVIR 369
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 1583107296 386 GLRKYMPITGTTFLLGTLSLCGIPPLACFWSKDEIL-----ADSWLYFPIL 431
Cdd:PRK06458 370 GLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILtaglaRGPLLIAILL 420
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
85-421 |
5.81e-30 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 124.54 E-value: 5.81e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 85 VGYLIDPLTSIMLVLVTTIGVMVMIHSDSYMSHD--QGYVRFFAYLSLPNASMSGLVLSPNLIQIYIFRELVGMCSYLLI 162
Cdd:PRK06589 77 IGLHLEPLGLIFLLLIGFLWICALLYTPKYLAINniDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLI 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 163 GFWFTRPSAANACQKAFITNRVGDFGLLLGTSGFYWIIGSFKFE--DLFErFNESLAnhevsfffatpcALLFLLGPVAK 240
Cdd:PRK06589 157 GHTRNNISLSGGYKYLKILMISALLLFLPAVILIYTKTGNLDFVsgGLFS-KNQSII------------LLLMFIYGIAK 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 241 SAQFPLHVWLPDAMEGPTPISAPIHAATMVAAGIFLVARM------LPLLKALPLVMSPISWVGGITASLGATIALAQKD 314
Cdd:PRK06589 224 TAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKIllyifgLSYLQRIFAEFNWLIFIPIVSIFYSSLKALKTDN 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 315 LKRILAYSTMSQLGYMMLASGI---GSSRAALFHLITHAYPKALLSPGSGSVihsmepivgYCPDKSQNIALMGGLRKYM 391
Cdd:PRK06589 304 IKKILAYSTISQLSLALLSAFIltpKALGAAILHLVSHSFAKICLFYSMGSI---------YSLKKEDQVDKLHGTSKSF 374
|
330 340 350
....*....|....*....|....*....|
gi 1583107296 392 PITGTTFLLGTLSLCGIPPLACFWSKDEIL 421
Cdd:PRK06589 375 PLISFIISISSLSLIGIPIFSGFISKFLIL 404
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
92-473 |
3.85e-28 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 119.25 E-value: 3.85e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 92 LTSIMLVLVTtigVMVMIHSDSYMSHDQGYVRFFAYLSLPNASMSGLVLSPNLIQIYIFRELVGMCSYLLIGF---WFTR 168
Cdd:MTH00095 49 LFSLILLLVT---LSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLVLFynnWDSN 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 169 PSAANAcqkaFITNRVGDFGLLLGTSGFywIIGSFKFEDLFerfneslanhevsfFFATPCALLFLLGPVAKSAQFPLHV 248
Cdd:MTH00095 126 SGAMNT----ALTNRIGDFFIFLFFSGF--IFSSYYFFSFS--------------FFSSSMILMLLLTSFTKSAQFPFSS 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 249 WLPDAMEGPTPISAPIHAATMVAAGIFLVARMLPLLKALpLVMSPISWVGGITASLGATIALAQKDLKRILAYSTMSQLG 328
Cdd:MTH00095 186 WLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNM-NVMKIMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMG 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 329 YMMLASGIGSSRAALFHLITHAYPKALLSPGSGSVIHSMepivgycpDKSQNIALMGGLRKYMPITGTTFLLGTLSLCGI 408
Cdd:MTH00095 265 FSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSN--------FGQQDGRNYSNNGNLPMFIQLQLLVTLFCLCGL 336
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1583107296 409 PPLACFWSKDEILADSWL--YFPILGWIARFTAGLTGFYMFRMYFLtlegdFRANSSKNVISSYVSL 473
Cdd:MTH00095 337 MFTSGMVSKELILELFFFnnYMIFFSLMFFFSVFLTFGYSYRLWKS-----FFLSFSKVVNVYSSSV 398
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
14-421 |
8.00e-28 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 117.95 E-value: 8.00e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 14 FPLLSSIIIGLgllfFPKATRSFRRIYAIISTLLLSIAMVFSFHFFLQqiTGNSTYRYSWSWIPNQNVTSEVGylidPLT 93
Cdd:PRK08377 11 LPLISAFFVPV----IKGIGKSAVRYYLILITLLQTGIAGWVFMEVYT--TGKPIIIMAGGWKPPVGINLYIG----PFA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 94 SIMLVLVTTIGVMVMIHSDSYMSHD--QGYVRFFAYLSLpnaSMSGLVLSPNLIQIYIFRELVGMCSYLLIGFWFTRpSA 171
Cdd:PRK08377 81 ALFVLIIAIVSFIMSIFSLKAVEVEpiDKYAMLFLLLML---GATGMIATGDIFNLFVFMEITAITAYALTAYNKTG-EA 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 172 ANACQKAFITNRVGDFGLLLGTSGFYWIIGSFKFEDLFERFNEslanheVSFFFATPCALLFLLGPVAKSAQFPLHVWLP 251
Cdd:PRK08377 157 AEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQLAGT------IDPTVAQVGLALLIFGLAVEAELFPLNAWAP 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 252 DAMEG-PTPISApIHAATMVAAGIFLVARMLPLLKALPLVMSPISWV---GGITASLGATIALAQKDLKRILAYSTMSQL 327
Cdd:PRK08377 231 DAYQAaPHPITV-MFSAFVVKAGLYAMARILYLMQNANGWSSVLKLViimATLTVFFAELSALRQKNVKRMIAYSSIGQV 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 328 GYMMLASGIGSS---RAALFHLITHAYPKALLSPGSGSVIHSMepivgycpdKSQNIALMGGLRKYMPITGTTFLLGTLS 404
Cdd:PRK08377 310 GMIALALALGTQagvDAGVFHMINHAIVKALLFLAVGYVGITL---------GGTEIEKFEGLGKRMPLTALALTIGALS 380
|
410
....*....|....*..
gi 1583107296 405 LCGIPPLACFWSKDEIL 421
Cdd:PRK08377 381 TVGIPLFNVFWSKFRII 397
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
9-417 |
4.06e-26 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 114.06 E-value: 4.06e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 9 WMIPLFPLLSSIIIGLglLFFPKATRSFRRIYAIISTLLLSIamvfsFHFFLQQITGNSTYRYSWSWIPNQNVTsevgYL 88
Cdd:PRK08667 6 FLGAILLLLAAAVIPL--VFRHKRKRVWQSVLWLVIAIALLL-----FAGSLQLFTGNPLDIPLWGIAPGLDIT----FH 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 89 IDPLTSIMLVLVTTIGVMVMIHSDSYMSHDQGYVR---FFAYLSLPNASMSGLVLSPNLIQIYIFRELVGMCSYLLIGFW 165
Cdd:PRK08667 75 IDRLAAFFIILIGLVSLCVAIYSLGYNEHMSSNERanlLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMND 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 166 FTRPSAANACQKAFITNRVGDFGLLLGTSGFYWIIGSFKFEDLferfneSLANHEVSFFFatpcaLLFLLGPVAKSAQFP 245
Cdd:PRK08667 155 YQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPL------GASAGILSLVF-----LLLFLGFGIKAGIIP 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 246 LHVWLPDAMEG-PTPISApihaatmVAAGIFLVARMLPLLKALPLVMSPISW-------VGGITASLGATIALAQKDLKR 317
Cdd:PRK08667 224 FHKWLPYAHPAsPSNVSA-------LMSGVMLKVAVYGLVRFLMDVLSPELWwgvlillAGSISALLGVIYALKEHDLKG 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 318 ILAYSTMSQLGYMMLasGIG----------------SSRAALFHLITHAYPKALLSPGSGSVIHSMepivgycpdKSQNI 381
Cdd:PRK08667 297 LLAYSSIENIGIILM--GIGlyvifgvygldtlallALGGALFHSLNHALFKSLLFLTAGSVVHAT---------GTRNI 365
|
410 420 430
....*....|....*....|....*....|....*.
gi 1583107296 382 ALMGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSK 417
Cdd:PRK08667 366 EKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASE 401
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
10-461 |
5.71e-26 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 111.96 E-value: 5.71e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 10 MIPLFPLLSSIIIGLGLLFFPKATRSFRRIYAIISTLLLSIAMVFSFhfflqqitgnstyrySWSWIPNQNVTSEVGYLI 89
Cdd:TIGR01770 4 ILPEIILLLGAFILLLYGLFYSRKKRNPLLLKNLSYIVLLSALVSLF---------------LTLQYAAYLFTGFSFFIV 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 90 DPLTSI--MLVLVTTIGVMVMIHSDSYMSHDQgYVRFFAYLSLPNASMSGLVLSPNLIQIYIFRELVGMCSYLLIGFWFT 167
Cdd:TIGR01770 69 DNFALLikLILLLSTLLTFFFALSYLSKEKIN-KFEFYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRK 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 168 RPSAANACQKAFITNRVGDFGLLLGTSGFYWIIGSFKFEDLFERFNeSLANHEVSFFFATpcaLLFLLGPVAKSAQFPLH 247
Cdd:TIGR01770 148 SRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLFLS-NGMLNISLLLLGI---VLILVGLLFKLSAVPFH 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 248 VWLPDAMEG-PTPISAPIHAATMVAAGIFLVARMLPLLKALPLVMSPISWVGGI-TASLGATIALAQKDLKRILAYSTMS 325
Cdd:TIGR01770 224 MWVPDVYEGaPTPVTAFFSIVPKIAIFAVFLRLFLYILFGFSEAWQIFLAIIAFlSMLIGNFGALAQKKVKRLLAYSSIS 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 326 QLGYMM---LASGIGSSRAALFHLITHaypkALLSPGSGSVIHSMEpivGYCPDKSQNIALMGGLRKYMPITGTTFLLGT 402
Cdd:TIGR01770 304 HVGYILiglLAGTLEGIKAVLFYIFIY----ALMSLGAFGVLSLLR---SYKDEWIEYISDFAGLFKTNPILAILILIFM 376
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1583107296 403 LSLCGIPPLACFWSKDEILA---DSWLYFpiLGWIARFTAGLTGFYMFR----MYFLTLEGDFRAN 461
Cdd:TIGR01770 377 FSLAGIPPLAGFFGKFYVFFallKSGLYW--LAVIAVLTSVIGAFYYLRvvkvMYFDKPERRIPSN 440
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
11-417 |
1.63e-24 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 107.73 E-value: 1.63e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 11 IPLFPLLSSIIIGLGLLFFPKATRSFRRIY--AIISTLLLSIAMvfsfhffLQQITGNSTYRYSWS-WIPNQNVTsevgY 87
Cdd:PRK12663 5 LLILPMLLPLLCGLVLVFLRNRDRLQRYLAigTLTILTLISLAL-------LIYVQRHGPITLDFGgWLPPFGIQ----F 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 88 LIDPLTSIMLVLVTTIGVMVMIHSDSYMSHDQGYVRFFAYLSLPNASMSGLVLSPNLIQIYIFRELVGMCSYLLIGFWFT 167
Cdd:PRK12663 74 TGDSLSALMVTTASFVATAIMAYGFGDIEHSGRRYGFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLITLGQE 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 168 RPSAANACQKAFItNRVGDFGLLLGTSGFYWIIGSFKFEDLFERFNESLANHEVsfffaTPCALLFLLGPVAKSAQFPLH 247
Cdd:PRK12663 154 REQLRGAIKYVVL-NLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGDTATL-----TTIALLFLLAFGMKAALFPFM 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 248 vWLPDAMEGPTPISAPIHAATMVAAGIFLVARMLPLL-KALPLVMSP-ISWVGGITASLGATIALAQKDLKRILAYSTMS 325
Cdd:PRK12663 228 -WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLfPQERELLHPlLATMAAITMVIGALGALAYKDIRRIAGYQVIS 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 326 QLGYMMLASGIGSSRA---ALFHLITHAYPKALLSPGSGSVIHsmepIVGYcpdksQNIALMGGLRKYMPITGTTFLLGT 402
Cdd:PRK12663 307 SIGFILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLVR----LTGY-----RSLQYLGGLYRKEPLFGALFLILI 377
|
410
....*....|....*
gi 1583107296 403 LSLCGIPPLACFWSK 417
Cdd:PRK12663 378 FAIGGLPPFSGFWGK 392
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
15-417 |
2.94e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 106.96 E-value: 2.94e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 15 PLLSSIIIGLGLLFFPKATRSFRRIYAIISTLLLSIAMVFSFHFFLQQITgnstYRYSWSWIPNQNVTsevgyLIDPLTS 94
Cdd:PRK07691 9 PILIPVITAILLIFLGKRPIIQRYVALIGSLLTLVAAIILVANVYKHGIQ----TLELGNWKAPFGIV-----FVADMFA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 95 IMLVLVTTI-GVMVMIHSDSYMSHDQGYVRFFAYLSLPNASMSGLVLSPNLIQIYIFRELVGMCSYLLIGFWFTRPSAAN 173
Cdd:PRK07691 80 ALLVLTSSIiTFLVILYSFQTIGIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTKIQLRE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 174 ACqKAFITNRVGDFGLLLGTSGFYWIIGSFKFEDLFERFNESLANHEVsffFATPCALLFLLGPVAKSAQFPLHVWLPDA 253
Cdd:PRK07691 160 SI-KYVLINVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSAGQTG---LITVVAILFLFVFATKAGLFPLYFWLPGS 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 254 MEGP-TPISApIHAATMVAAGIFLVARMLPLL--KALPLVMSPISWVGGITASLGATIALAQKDLKRILAYSTMSQLGYM 330
Cdd:PRK07691 236 YYAPpIAIAA-LFGALLTKVGVYAIARTFTLFfsHDTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVI 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 331 MLASGIGSSRA---ALFHLITHAYPKALLSPGSGSVIHsmepIVGYcpdksQNIALMGGLRKYMPITGTTFLLGTLSLCG 407
Cdd:PRK07691 315 LVGVAMMTESGmigAIYYLIHDMIVKAALFLLIGIMIK----ITGT-----TDLKKMGGLIKRYPVLGWMFFIAALSLAG 385
|
410
....*....|
gi 1583107296 408 IPPLACFWSK 417
Cdd:PRK07691 386 IPPLSGFYGK 395
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
9-422 |
7.58e-24 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 106.52 E-value: 7.58e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 9 WMIPLFPLLSSIIIGLGLLFFPKATRsfrRIYAIIsTLLLSIAMVFS--------FHFFLQQItgnstyryswswipnqn 80
Cdd:PRK12668 2 MLDFLPPALVFIAGALLVPFLPGRAR---KALLLL-APVLAVLAVLTvpegtyltVTFLGFDL----------------- 60
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 81 vtseVGYLIDPLTSIMLVLVTTIGVMVMI---HSDSYMSHDQGyvrfFAYLslpnASMSGLVLSPNLIQIYIFRELVGMC 157
Cdd:PRK12668 61 ----VLGRVDKLSRVFGLIFGIMAFIGVIyalHVKDPGQHVAA----LLYV----GSALGAVFAGDLLTLFVFWELMAFT 128
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 158 SYLLIgfWFTR-PSAANACQKAFITNRVGDFGLLLGTSGFYWIIGSFKFEDLFErfneslanhevsffFATPCALLFLLG 236
Cdd:PRK12668 129 STFLV--WARGtKAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAFGAIAG--------------LGGTAAWLILIG 192
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 237 PVAKSAQFPLHVWLPDAMEGPTPISAPIHAATMVAAGIFLVARMLPLLKALplvmspiSWVGGITASLGATIALAQKDLK 316
Cdd:PRK12668 193 FGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPGTELL-------IYIGAAMAVYGVFFALLENDLR 265
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 317 RILAYSTMSQLGYMMLASGIGSSRA---ALFHLITHAYPKALLSPGSGSVIHSMepivgycpdKSQNIALMGGLRKYMPI 393
Cdd:PRK12668 266 RLLSYHIVSQVGYMVAGIGIGTALAingAVAHAFNHILYKGLLFMSAGAVLYRT---------GTEKLTELGGLYRSMPL 336
|
410 420
....*....|....*....|....*....
gi 1583107296 394 TGTTFLLGTLSLCGIPPLACFWSKDEILA 422
Cdd:PRK12668 337 TALFCLVGALSISAFPLFSGFVSKSMIIS 365
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
13-449 |
7.71e-24 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 105.94 E-value: 7.71e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 13 LFPLLSSIIIGlgllFFPKAT--RSFRRIYAIISTLLLSIAMVFSFHFFLQqiTGNSTYRYSWSWIPNQNVTSEVGylID 90
Cdd:PRK06473 7 WIPLLGAILIG----FWPSGIngKLARSVALVIASVLLLLSLVLAFQFDPG--NPNQQFTEFIPWIDSLGLSYHLG--VD 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 91 PLTSIMLVLVTTIGVMVMIHSDSYMSHDQGYvrfFAYLSLPNASMSGLVLSPNLIQIYIFRELVGMCSYLLIGFWfTRPS 170
Cdd:PRK06473 79 GLSLPLLVLNSLLTLIAIYSSDESIQRPRFY---YSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIW-GGQR 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 171 AANACQKAFITNRVGDFGLLLGTSGFYWIIGSFKFEdlferFNESLANhevSFFFATPCALL--FLLGPVAKSAQFPLHV 248
Cdd:PRK06473 155 RGYAATKFLLYTAISGILILVSFLGLVWLSGASSFD-----YEPLRSH---TLPLSTQLLLLapILVGFGIKIPLVPFHT 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 249 WLPDA-MEGPTPISapihaatMVAAGIFLVARMLPLLKaLPLVMSPISWV---------GGITASLGATIALAQKDLKRI 318
Cdd:PRK06473 227 WLPDAhVEASTPVS-------VLLAGVLLKLGTYGLLR-FGVGLFPEAWVylapwlatwAVVSVLYGASCAIAQKDMKKM 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 319 LAYSTMSQLGYMMLASGIG---SSRAALFHLITHAYPKALLSPGSGSVihsmepivgYCPDKSQNIALMGGL---RKYMP 392
Cdd:PRK06473 299 VAYSSIGHMGYILLAAAAAtplSILAAVFQMISHGLISALLFLLVGVV---------YKKTGSRDVDVLRGLlnpERGLP 369
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 1583107296 393 ITGTTFLLGTLSLCGIPPLACFWSKDEILADSWLYFPILGWIARFTAGLTGFYMFRM 449
Cdd:PRK06473 370 ITGSLMILGVMASAGIPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLL 426
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
13-417 |
6.54e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 93.64 E-value: 6.54e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 13 LFPLLSSIIIglgllFFPKATRSFRRIYAIISTLLLSIAMVFsfhfFLQQITGNSTYRYSWSWIPNQNVTSEVgyliDPL 92
Cdd:PRK12662 11 IIPLLSAVVC-----ALLKNRKLVKIISCIVVAVSFFIALVL----FVQVYSGGVIKYSLGGWGPPYGIELRV----DIL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 93 TSIMLVLVTTIGVMVMIHSdSYMSHDQGYV----RFFAYLSLPNASMSGLVLSPNLIQIYIFRELVGMCSYLLIGFWFTR 168
Cdd:PRK12662 78 SATMLVLVNFIAVMSVLYG-IYPNRKEISVnkipSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMGRDK 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 169 PSAANACQkAFITNRVGDFGLLLGTSGFYWIIGSFKFEDLFERFNESLANHevsfffATPCALLFL-LGPVAKSAQFPLH 247
Cdd:PRK12662 157 KALVAAFE-YLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTNR------AIQIGVLFImVGLFIKAALFPFH 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 248 VWLPDAM-EGPTPISApIHAATMVAAGIFLVARML-PLLKA-LPLVMSPISWVGGITASL----GATIALAQKDLKRILA 320
Cdd:PRK12662 230 KWLIQAYsEAPSFISV-FFSGTSTKVMIYLIIRIVyDVFKAnFVFTTLPFNNVFMILAALaivfGSVLAILSKDIKRIFA 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 321 YSTMSQLGYMMLASGIGSSR---AALFHLITHAYPKALLSPGSGSVIHSMEpivgycpdkSQNIALMGGLRKYMPITGTT 397
Cdd:PRK12662 309 YSSISHIGYIILAVSLNTYYglaAAVAYIVNHSIVKSALFMVSGSISYHFG---------TTKLEDCLNLWKSMPKITLA 379
|
410 420
....*....|....*....|
gi 1583107296 398 FLLGTLSLCGIPPLACFWSK 417
Cdd:PRK12662 380 FVLLSLSLIGMPPTSGFVAK 399
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
14-445 |
1.28e-19 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 92.85 E-value: 1.28e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 14 FPLLSSIIIGlgllFFPKATRS--FRRIYAIISTLLLSIAMVFSFHFFLQqiTGNSTYRYSWSWIPNQNVTSEVGylIDP 91
Cdd:PRK07363 8 LPILGAIIIG----FFPGNLPSarLRQITLVFAVLVLAWSLFLLTQFDLS--DPGMQFQEYLPWNEPLGLSYSLG--VDG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 92 LtSIMLVLVTTIGVMVMIHSDSYMSHDQGYvrFFAYLSLPNASMSGLVLSPNLIQIYIFRELVGMCSYLLIGFWFTRPSA 171
Cdd:PRK07363 80 L-SLPLLVLNSLLTWIAIYSIGENTERPRL--YYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGEKRG 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 172 AnACQKAFITNRVGDFGLLLGTSGFYWIIGSFKFEdlFErfNESLANhevsFFFATPCALL--FLLGPVAKSAQFPLHVW 249
Cdd:PRK07363 157 Y-ASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFD--YD--AISTQN----LSLNTQLILLtgLLLGFGIKIPLVPLHTW 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 250 LPDAMEGPTPISAPIHAATMVAAGIFLVAR----MLPllKALPLVMSPISWVGGITASLGATIALAQKDLKRILAYSTMS 325
Cdd:PRK07363 228 LPDAYTEASPAVAILLGGVLAKLGTYGLLRfglqLFP--QTWSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAYSSIG 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 326 QLGYMMLASGIGSSRA---ALFHLITHAYPKALLSPGSGSVihsmEPIVGYCPDKSQNiALMGGLRKyMPITGTTFLLGT 402
Cdd:PRK07363 306 HMGYILVAAAAGTQLSllgAVAQMISHGLILALLFHLVGIV----ERKVGTRDLDVLN-GLMNPIRG-LPLTSALLVLAG 379
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 1583107296 403 LSLCGIPPLACFWSKDEILADSWLYFPILGWIARFTAGLTGFY 445
Cdd:PRK07363 380 MASAGIPGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVY 422
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
78-364 |
1.72e-18 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 89.32 E-value: 1.72e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 78 NQNVTSEVG-YLIDPLTSIMLVLVTTIGVMVMIHSDSYMSHDQGYVRFFAYLSLPNASMSGLVLSPNLIQIYIFRELVGM 156
Cdd:PRK08601 58 GANGDVVVGpWHLDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFTFTTGFASLAWLSGDLRLMALCWGATLL 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 157 CSYLLIG---FWFTRPSAANACQKAFItnrVGDFGLLLGTSGFYWIIGSFKFEDLFErfNESLANHevSFFFATPCALLF 233
Cdd:PRK08601 138 GLTLLIGlnkGWKVAREAAKISGMLFL---ISWLALALAIVWLFIATGEWQLTSVLS--NENLAQL--GTWEKTGINLLL 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 234 LLGPVAKSAQFPLHVWLPDAMEGPTPISAPIHAATMVAAGIFLvARMLPLL-----KALPLVMSPISWVggitasLGATI 308
Cdd:PRK08601 211 ILAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAGLVNAGGIML-TRFSPLFhddiaQILLLIFASISVL------IGTGI 283
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 1583107296 309 ALAQKDLKRILAYSTMSQLGYMMLASGIGSSRAALFHLITHAYPKALLSPGSGSVI 364
Cdd:PRK08601 284 SLVQVDYKRQLVGSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAV 339
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
10-417 |
2.29e-18 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 88.55 E-value: 2.29e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 10 MIPLFPLLSSIIIGLgLLFFPKATRSFRRIYAIIsTLLLSIAMVFSFHFFlqqitGNSTYRYSWswipnqnvTSEVGYLI 89
Cdd:PRK06277 6 LMVVFPMICAIIFNL-LHGKDKLIKYLTFIVAIL-LPILPFLASYGYYYF-----GGHGLVNGY--------HSGITYLF 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 90 DPLTSIMLVLVTTIGVMVMIhsdSYMSHDQGYVRFFAYLSLPNASMSGLVLSPNLIQIYIFRELVGMCSYLLIGFWFTRP 169
Cdd:PRK06277 71 NPAKQIIIFVLSLIASLVLI---TGLGEKKSSGLYVFLMLMGLASVSAIVLADDIFNLYVFFEIAAIVQVGLVIASGTEE 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 170 SAANACQKAFITNRVGDFgLLLGTSGFYWIIGSFKFEDLferfNESLANHEVSFFFATPCALLfLLGPVAKSAQFPLHVW 249
Cdd:PRK06277 148 AYKAALKYMILGNVAGSI-LLLGIGFLLASTGTLNITDI----HNALLVNPTSPVIYGGLLLL-IFGLLYGSGLPPFHTI 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 250 LPDAMEGPTP-ISAPIHA---ATMVAAGIFLVaRMLPLLKALPLVMSPISWVGGITASLGATIALAQKDLKRILAYSTMS 325
Cdd:PRK06277 222 KSDIYAKAKPfGSALLQTfskFVLVALMLVIF-KLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAIS 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 326 QLGYMMLASGIG---SSRAALFHLITHAYPKALLSPGSGsvihsmepIVGYCpDKSQNIALMGGLRKYMPITGTTFLLGT 402
Cdd:PRK06277 301 QGGYVAAGLALGtplGIVAGIFHAINHVIYKSALFLGAG--------IVSYR-TKTSNLRKLGGLLPVMPVVAFMVLCAK 371
|
410
....*....|....*
gi 1583107296 403 LSLCGIPPLACFWSK 417
Cdd:PRK06277 372 LAISGVPPFNGFQSK 386
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
10-421 |
2.75e-18 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 88.66 E-value: 2.75e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 10 MIPLFPLLSSIIIGLGLLffPKATRSFRRIYAIISTLLLSIAMVFSFHFFLQQITGNSTYryswswipnqnvtsevgYLI 89
Cdd:PRK08676 1 IIVYYLLVALLFLRLGLL--SRSHRLLNALALGHGLWHLGLSLWVLLVLPLPGYFMESRY-----------------LFI 61
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 90 DPLtSIMLVLVTTIG-VMVMIHSDSYMSH-------DQGYVR-FFAYLSLPNASMSGLVLSPNLIQIYIFRELVGMCSYL 160
Cdd:PRK08676 62 DHL-GIFVVLIASVVfILAALYARGYVDHllsngelDPENLKvFYLGFNLLLSVITFAFFSDNLALFWIFAELTTVFSAM 140
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 161 LIGFWFTRPSAANACQKAFITNRVGDFGLL------------LGTSGFYWiigsfkfedlferfnESLANH--EVSFFFA 226
Cdd:PRK08676 141 LIAILSARENIDAALKYIFIASTAMIFAFIgliflfsltrqaLGTGTLNW---------------TELAAHasLLSPSVL 205
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 227 TPCALLFLLGPVAKSAQFPLHVWLPDA-MEGPTPISApIHAATMVAAGIFLVARMLPLLK---ALPLVMSPISWVGGITA 302
Cdd:PRK08676 206 GASFLFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSA-LLSGTVLNIGIYGILRLSALLRqsgAAEQFSNVLIGLGIFSI 284
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 303 SLGATIALAQKDLKRILAYSTMSQLGYMMLASGIGSSRA---ALFHLITHAYPKALLSPGSGsVIHSMepivgYCPDKSQ 379
Cdd:PRK08676 285 AVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLAlfwMLFHMLAHSLVKSGLFFSAG-ILHRQ-----YRSDRFD 358
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 1583107296 380 NIalmGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSKDEIL 421
Cdd:PRK08676 359 RI---FDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFIL 397
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
38-416 |
8.87e-16 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 80.85 E-value: 8.87e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 38 RIYAIISTL--LLSIAMVFSFHFFLQQITGNSTYRYSWswIPNQNVTSEVGylIDPLtSIMLVLVTTIGVMVMIHSDSYM 115
Cdd:PRK12561 8 RWYALGVGLadFALMCYVFWQHYDPSSSSLQLVERYAW--LPQIGLEWSLG--VDGL-SMPLVLLSGLITTLSIFASWKV 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 116 SHDQgyvRFFAYLSLPNASMSGLV-LSPNLIQIYIFRELVGMCSYLLIGFW--FTRPSAA------NACQKAFITnrVGd 186
Cdd:PRK12561 83 TRKP---RLFYFLMLVLYSAQIGVfLAQDLLLFFLMWELELVPVYLLISIWggQKRLYAAtkfilyTALASIFIL--VA- 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 187 fGLLLGTSGfywiiGSFKFeDLFErfnesLANHEVSFFFATPCALLFLLGPVAKSAQFPLHVWLPDAM-EGPTPISapih 265
Cdd:PRK12561 157 -GLALALSG-----DTFTF-DLAE-----LGAKSYPLALELLLYAGFLIAFGVKLPIFPLHTWLPDAHgEASAPVS---- 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 266 aatMVAAGIFL------VARM-LPLLKALPLVMSPISWVGGITASL-GATIALAQKDLKRILAYSTMSQLGYMMLasGIG 337
Cdd:PRK12561 221 ---MILAGVLLkmggyaLIRFnVQMLPDAHVYFAPALAILGVVNIIyGALNAFAQDNVKRRLAYSSVSHMGFVLL--GIA 295
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 338 SSRA-----ALFHLITHAYPKALLSPGSGsvihsmepiVGYCPDKSQNIALMGGLRKYMPITGTTFLLGTLSLCGIPPLA 412
Cdd:PRK12561 296 AFTDlgisgAMLQMISHGLIAAALFFLTG---------VTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMS 366
|
....
gi 1583107296 413 CFWS 416
Cdd:PRK12561 367 GFVS 370
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
75-125 |
6.88e-15 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 68.99 E-value: 6.88e-15
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 1583107296 75 WIPNQNVTSEVGYLIDPLTSIMLVLVTTIGVMVMIHSDSYMSHDQGYVRFF 125
Cdd:pfam00662 1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
230-417 |
1.61e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 76.93 E-value: 1.61e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 230 ALLFLLGPVA---KSAQFPLHVWLPDAM-EGPTPISApIHAATMVAAGIFLVARMLPLLKALPLVMSPISWVGGITASLG 305
Cdd:PRK12665 209 TALFAVLLVAfgiKAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPGGGLDTLLMVVALLTMVVG 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 306 ATIALAQKDLKRILAYSTMSQLGYMM----LASGIGSSrAALFHLITHAYPKALLSPGSGSVihsmEPIVGycpdkSQNI 381
Cdd:PRK12665 288 ILGAIAQSDIKRLLSFTLVSHIGYMVfgiaLSTVAGLS-GAIYYVAHHITVQTTLFLVVGLI----ERQAG-----SSSL 357
|
170 180 190
....*....|....*....|....*....|....*.
gi 1583107296 382 ALMGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSK 417
Cdd:PRK12665 358 RRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGK 393
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
133-448 |
2.38e-14 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 76.20 E-value: 2.38e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 133 ASMSGLVL--SPNLIQIYIFRELVGMCSYLLIGFWFTRPSAANACQKafitnrvgdFGLLLGTS------GFYWIIGSFK 204
Cdd:CHL00049 120 ATLGGMFLcgANDLITIFVALECLSLCSYLLSGYTKKDVRSNEATMK---------YLLMGGASssilvyGFSWLYGLSG 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 205 FEDLFERFNESLANHEVSFFFATPCALLFLL-GPVAKSAQFPLHVWLPDAMEG-PTPISAPIhAATMVAAGIFLVARMLP 282
Cdd:CHL00049 191 GEIELQEIVNGLINTQMYNSPGISIALIFITvGIGFKLSLAPFHQWTPDVYEGsPTPVVAFL-SVTSKVAASALATRIFD 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 283 LLkaLPLVMSPISWVGGITASL----GATIALAQKDLKRILAYSTMSQLGYMMLASGIGSSRAALFHLITHAYPKALLSP 358
Cdd:CHL00049 270 IP--FYFSSNEWHLLLEILAILsmilGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLFYIFMNL 347
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 359 GSGSVIHSMEPIVGycpdkSQNIALMGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSKDEILADSW---LYFpiLGWIA 435
Cdd:CHL00049 348 GTFACIVLFGLRTG-----TDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGKLYLFWCGWqagLYF--LVSIG 420
|
330
....*....|...
gi 1583107296 436 RFTAGLTGFYMFR 448
Cdd:CHL00049 421 LLTSVISIYYYLK 433
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
46-356 |
8.66e-14 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 74.53 E-value: 8.66e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 46 LLLSIAMVFSFHFFLqqiTGNSTYRYSWSWIPNQNVTSEVGYLIDPLTSIMLVLVTTIGVMVMIHSDSYMSHDQGYVRFF 125
Cdd:MTH00063 3 LLVSLLLCLLIFFLF---LVGVSSSVSLNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLN 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 126 AYLSLPNASMSGLVLSPNLIQIYIFRELVGMCSYLLIGFWFTRPSAanacQKAFIT---NRVGDFGLLLgTSGFYWIIGS 202
Cdd:MTH00063 80 KLIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDNFLSL----RASVVTlvsSRFGDVCLFL-LIGLSCWGGS 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 203 FKFedlferfneslanhevsfffatPCALLFLLGPVAKSAQFPLHVWLPDAMEGPTPISAPIHAATMVAAGIFLVARMLP 282
Cdd:MTH00063 155 GSF----------------------LCCLFFFLIVFTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDY 212
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1583107296 283 LLkALPLVMSPISWVGGITASLGATIALAQKDLKRILAYSTMSQLGYMMLASGIGSSRAALFHLITHAYPKALL 356
Cdd:MTH00063 213 LL-GFSWLSIFFSVLLLLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLL 285
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
133-417 |
1.23e-12 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 70.85 E-value: 1.23e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 133 ASMSGLVLS--PNLIQIYIFRELVGMCSYLLIGFWFTRPSAANACQKAFITNRVGDFGLLLGTSGFYWI-IGSFKFEDLF 209
Cdd:PRK02504 119 ATLGGMFLSgaTELVMIFISLETLSIASYLLTGYMKRDPRSNEAALKYLLIGAASSAIFLYGSSLLYGLsGGSTQLSAIA 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 210 ERFNESLAnhevsffFATPCALLFLLGPVA-KSAQFPLHVWLPDAMEG-PTPISAPIHAATMvAAGIFLVARMLplLKAL 287
Cdd:PRK02504 199 LALITSPS-------LGLALALVFVIAGIAfKISAVPFHQWTPDVYEGsPTPVVAFLSVGSK-AAGFALAIRLL--VTAF 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 288 PLVMSPISWVGGITA----SLGATIALAQKDLKRILAYSTMSQLGYMMLASGIGSS---RAALFHLIthAYPKALLSPGS 360
Cdd:PRK02504 269 PSFDEQWKLLFTALAilsmVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGTEagyASMVFYLL--AYLFMNLGAFA 346
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 1583107296 361 GSVIHSMEpivgycpDKSQNIALMGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSK 417
Cdd:PRK02504 347 CVILFSLR-------TGTDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
245-414 |
7.45e-12 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 68.70 E-value: 7.45e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 245 PLHVWLPDAMEGPTPISAPIHAATMVAAGIF------LVARMLPLLKALPLVMspiswVGGITASLGATIALAQKDLKRI 318
Cdd:PRK08042 198 PLHGWVPQAHANASAPAAALFSTVVMKIGLLgiltlsLLGGNAPLWWGVALLV-----LGMITAFVGGLYALMEHNIQRL 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 319 LAYSTMSQLGYMMLASGIGSSRAA--------------LFHLITHAYPKALLSPGSGSVIHSmepiVGYcpdksQNIALM 384
Cdd:PRK08042 273 LAYHTLENIGIILLGLGAGVTGIAleqpalialglvggLYHLLNHSLFKSVLFLGAGSVWFR----TGH-----RDIEKL 343
|
170 180 190
....*....|....*....|....*....|
gi 1583107296 385 GGLRKYMPITGTTFLLGTLSLCGIPPLACF 414
Cdd:PRK08042 344 GGIGKKMPVISIAMLVGLMAMAALPPLNGF 373
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
138-421 |
2.78e-11 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 66.19 E-value: 2.78e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 138 LVLSPNLIQIYIFRELVGMCSYLLIGFwfTRPSA--ANACQKAFITNRVGDFGLLLGTSGFYWIIGSFKFEDlferfNES 215
Cdd:MTH00199 113 LVSSINWLSIYLAIELQTLTLFILVAL--KRDSAysTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIQG-----INS 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 216 LANHEVSFFFATpCALLFLLGPVaksaqfPLHVWLPDAMEG-PTPISAPIhaATMVAAGIFlvarmlPLLKALPLVMSPI 294
Cdd:MTH00199 186 ILTGDVGKILIT-ISLLFKLSAA------PFHMWAPDVYEGaPTITTALL--ATVPKIGVF------SILVQIGPVTNVV 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 295 SWVGGITASLGATIALAQKDLKRILAYSTMSQLGYMMLASGIGSS---RAALFHLITHAypkaLLSPGSGSVIHSMEPIV 371
Cdd:MTH00199 251 LICAVLSIIYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSFesiQASLIYMIIYV----IMSICSFSIILSLKLTK 326
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 1583107296 372 GYcpdksqnIALMGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSKDEIL 421
Cdd:MTH00199 327 GL-------IVEVSGLSRKNPVIALTLALTFLSIAGIPPLAGFLSKWLIL 369
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
138-482 |
2.15e-10 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 63.13 E-value: 2.15e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 138 LVLSPNLIQIYIFRELVGMCSYLLIGFWFTRPSAANACQKAFITNRVGDFGLLLGTSGFYWIIGSFKFEDLFERFNESLA 217
Cdd:MTH00196 9 LISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYINLVLNSGQS 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 218 NHEVSFFFATpcaLLFLLGPVAKSAQFPLHVWLPDAMEG-PTPISAPIhaATMVAAGIFLvarmlpLLKALPLVMSPISW 296
Cdd:MTH00196 89 FSSVSVPIGY---LLIIVALLFKLSVAPFHMWAPDVYEGaPTKTTALL--AIVPKLGIFS------ILVSIGLNVNILLI 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 297 VGGITASLGATIALAQKDLKRILAYSTMSQLGYMMLASGIG---SSRAALFHLITHAYPKALLspgsgsvihsMEPIVGY 373
Cdd:MTH00196 158 GGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGsfeSIQASLVYLFIYIIMSICV----------FSIILAL 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 374 CPDKSQNIALmGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSKDEILADSWLY-FPILGWIARFTAGLTGFYMFRMYFL 452
Cdd:MTH00196 228 NVYKNLIIEF-SGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYqYYLIFLLAVFCSVIAGVYYVRIVKI 306
|
330 340 350
....*....|....*....|....*....|
gi 1583107296 453 TLegdFRANSSKNVISSYVSLWGNLQFGTS 482
Cdd:MTH00196 307 LF---FQANSFLLISTKILKKENKINLRKA 333
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
8-431 |
3.20e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 59.86 E-value: 3.20e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 8 GWM--IPLFPLLSSIIIGLGLLFFPKATRSFRRIYAIISTLLLSIAmvfSFHFFLQQITGNS-TYRYS-WSwipnqnvtS 83
Cdd:PRK12666 2 DWMnhLIILPILLPLLTAALLLLLDERRRRLKRAISLASTLLLLAV---AVALLASAAAGGIgVYLLGnWP--------A 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 84 EVG--YLIDPLTSIMLVLVTTIGVMVMIHSdsyMS--HDQGyVRFFAYLSLPNASMSGLVLSPNLIQIYIFRELVGMCSY 159
Cdd:PRK12666 71 PFGivLVLDRLSALMLLLTALLALAALLYA---LAgwDRAG-PHFHALFQFQLMGLNGAFLTGDLFNLFVFFEVLLAASY 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 160 --LLIGFWFTRPSAAnacqKAFIT-NRVGDFGLLLGTSGFYWIIGSFKFEDLFERFNEsLANHEVSFFFATpcALLFLLG 236
Cdd:PRK12666 147 glLLHGSGRARVRAG----LHYVAiNLVASSLFLIGVGLIYGVTGTLNMADLAQRIAQ-LPAADRALLEAG--AALLLVV 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 237 PVAKSAQFPLHVWLPDA-MEGPTPISAPIhaATMVAAGIFLVARMLPLL-----KALPLVMSPISWVGGI-TASLGATIA 309
Cdd:PRK12666 220 FLIKAAMWPLNFWLPPAyAAASAPVAALF--AIMTKVGIYAILRLSTLLfgpeaGASAGFGQDWLLPGGLaTLAFGAIGV 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 310 LAQKDLKRILAYSTMSQLGYMMLASGIGSSR---AALFHLITHAYPKA-------LLSPGSGSVIHSMEPI-VGYCPDKS 378
Cdd:PRK12666 298 LAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAataAALYYLVHSTLAAAalflladLVERQRGAAADRLAVTpELYDLDEE 377
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1583107296 379 QNIALMGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSKDEIL---------ADSWLYFPIL 431
Cdd:PRK12666 378 EEEEVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKFALLqallnppgaGAAWWLWALV 439
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
14-408 |
6.02e-09 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 58.95 E-value: 6.02e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 14 FPLLSSIII-----GLGLLFFPKATRSFR-RIYAIISTLLLSIAMVFSFHFFLQQITGNSTYRYSWSWIPNQNVTSEVGy 87
Cdd:PRK02546 6 FPWLTTIILfpivaALLIPFIPDKGDGKTvRWYALIVGLIDFLITVYAFYTGYDFSNPGLQLVESYSWLPQLGLTWSVG- 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 88 lIDPLTSIMLVL---VTTIGVM----VMIHSdsymshdqgyvRFFAYLSLP-NASMSGLVLSPNLIQIYIFRELVGMCSY 159
Cdd:PRK02546 85 -ADGLSMPLILLtgfITTLAVLaawpVTFKP-----------KLFYFLMLAmYGGQIAVFAVQDMLLFFLAWELELIPVY 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 160 LLIGFW--FTRPSAANAcqkaFITNRVGD--FGLLLG-TSGFYWIIGSFKFEDLferfneslANHEVSFFFATPCALLFL 234
Cdd:PRK02546 153 LLLAIWggKKRQYAATK----FILYTAGSslFILLAAlAMAFYGDTPTFDMTAL--------AAKDFGLGFQLLCYAGLL 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 235 LGPVAKSAQFPLHVWLPDAMEGPTpisAPIHaatMVAAGIFLV----------ARMLPLLKAlplVMSPISWVGGITASL 304
Cdd:PRK02546 221 IAYGVKLPIVPLHTWLPDAHGEAT---APVH---MLLAGILLKmggyallrmnAGMLPDAHA---QFAPLLIVLGVVNII 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 305 GATI-ALAQKDLKRILAYSTMSQLGYMMLasGIGS-----SRAALFHLITHaypkallspgsGSVIHSMEPIVGYCPDKS 378
Cdd:PRK02546 292 YAALtSFAQRNLKRKIAYSSISHMGFVLI--GIGSftdlgTSGAMLQMISH-----------GLIGASLFFLVGATYDRT 358
|
410 420 430
....*....|....*....|....*....|....*
gi 1583107296 379 QNIAL--MGGLRKYMPIT---GTTFLLGTLSLCGI 408
Cdd:PRK02546 359 HTLMLdeMGGVGQKMRKMfamWTACSLASLALPGM 393
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
9-449 |
8.88e-09 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 58.41 E-value: 8.88e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 9 WMIPLFPLLSSIIIGLGLLFFPKATRSFrriyaiistllLSIAMVFSFHFFLQQITGNStyryswswIPNQNVTsevgyl 88
Cdd:MTH00206 2 ILIPLIMLLLMTILSKKKWLWRSTTFFS-----------FLIALLFLLWFKWSSEVGWS--------FSNLYLS------ 56
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 89 IDPLtSIMLVLVTTIGVMVMIHSDSYMSHDQGYVRFFAYLSLPNASMSGLVL---SPNLIQIYIFRELVGMCSYLLIGFW 165
Cdd:MTH00206 57 YDPL-SSPLVILSCWLLPLMFLASQNHMKNEPINRQRIYITLLIVLQLFLILffsSSNLLLFYILFEASLIPTLLLITRW 135
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 166 FTRPSAANACQKAFITNRVGDFGLLLGTSGFYWIIGSFKFEDLFERFNESLANhevsFFFATPCALLFLlgpvAKSAQFP 245
Cdd:MTH00206 136 GNQKERLNAGYYFLFYTLIGSLPLLIALLFLQNSLGSLSLYILYFSKLTTWNN----NLWWLACILAFL----VKLPLYG 207
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 246 LHVWLPDAMegptpISAPIhAATMVAAGIFL------VARMLPLLKALPLVMSPI----SWVGGITASLgatIALAQKDL 315
Cdd:MTH00206 208 VHLWLPKAH-----VEAPV-AGSMVLAGVLLklggygMMRIILILGPSTKLSSYFfiilGLWGSIMTSS---ICLRQTDL 278
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 316 KRILAYSTMSQLG------------------YMMLASGIGSSraALFHLIThaypkallspgsgsvihsmepiVGYCPDK 377
Cdd:MTH00206 279 KSLIAYSSVSHMSlvtagilsgspwgfkgalLLMIAHGLVSS--ALFCLAN----------------------LLYERSH 334
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1583107296 378 SQNIALMGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSkdEILADSWLY------FPILGWIARFTAGLTgFYMFRM 449
Cdd:MTH00206 335 TRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFG--ELLIITSLFswsnftLPLLGLGFLFTAIYS-LYMFVM 409
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
16-458 |
1.64e-08 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 57.44 E-value: 1.64e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 16 LLSSIIIGLGLLFFPKATRSFRRIYAIISTLLLSIAMVFSFHFFLQQITGNSTYRYSwswipnqnvtsevgyliDPLTSI 95
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKYPWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLSS-----------------DMLSAP 63
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 96 MLVLVTTIGVMVMIHSDSYMSHDQGYVRFFAYLSLPNASMSGLVLSPNLIQIYIFRELVGMCSYLLIGFWFTRPSAANAC 175
Cdd:MTH00014 64 LITLTLWITALMILASFKIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQAS 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 176 QKAFITNRVGDFGLLLGTSGFYWIIGSFKFedlferFNESLANHevSFFFATPCALLFLLGPVAKSAQFPLHVWLPDAMe 255
Cdd:MTH00014 144 FYLMIYTVTASLPLLMSILLIFYTNNSLSM------LMSSMEPP--SIYLMNLWWLITILAFMVKMPLYTVHLWLPKAH- 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 256 gptpISAPIhAATMVAAGIFL------VARMLPL----LKALPLVMSPISWVGGITASLgatIALAQKDLKRILAYSTMS 325
Cdd:MTH00014 215 ----VEAPV-AGSMILAGILLklggygLLRMSSLfmhiNKSLSAPFSSISLVGAVITSL---ICIRQPDLKSLIAYSSVG 286
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 326 QLGYM---MLASGIGSSRAALFHLITHAypkalLSPGSGSVIHSMEpivgYCPDKSQNIALMGGLRKYMPITGTTFLLGT 402
Cdd:MTH00014 287 HMGLMtagIMSNTSWGWQGALAMMIAHG-----LCSSALFALANMT----YETTHTRSLFLTKGLLSLFPTMTMWWFLLS 357
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 403 LSLCGIPPLACFWSK----DEILADSWLYFPILGwiarFTAGLTGFYMFRMYFLTLEGDF 458
Cdd:MTH00014 358 AANMAAPPSINLLSEimllTSILSSSLSTAILLA----ITSFLAAAYSLFLYTSTQHGSP 413
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
14-398 |
3.90e-08 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 56.49 E-value: 3.90e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 14 FPLLSSIII-----GLGLLFFPKATRSFRRIYAIISTLL--LSIAMVFSFHFFLQQITGNSTYRYSWswIPNQNVTSEVG 86
Cdd:CHL00011 4 FPWLTIIVVlpifaGSLIFFLPHRGNKVIRWYTLCICLLelLLTTYAFCYHFQLDDPLIQLKEDYKW--INFFDFHWRLG 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 87 ylIDPLtSIMLVL----VTTIGVMVM--IHSDSymshdqgyvRFFAYLSLPNASMS-GLVLSPNLIQIYIFRELVGMCSY 159
Cdd:CHL00011 82 --IDGL-SIGPILltgfITTLATLAAwpVTRNS---------RLFYFLMLAMYSGQiGLFSSRDLLLFFIMWELELIPVY 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 160 LLIGFWFTRPSAANAcQKAFITNRVGDFGLLLG--TSGFYWIIG-SFKFEDLFERfnESLANHEVSFFFAtpcallFLLG 236
Cdd:CHL00011 150 LLLSMWGGKKRLYSA-TKFILYTAGGSIFLLIGvlGMGLYGSNEpTLNFETLANQ--SYPVALEILFYIG------FLIA 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 237 PVAKSAQFPLHVWLPDamegpTPISApiHAAT-MVAAGIFLvaRM---------LPLLKALPLVMSP-ISWVGGITASLG 305
Cdd:CHL00011 221 YAVKLPIIPLHTWLPD-----THGEA--HYSTcMLLAGILL--KMgayglirinMELLPHAHSIFSPwLVIVGAIQIIYA 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 306 ATIALAQKDLKRILAYSTMSQLGYMMLasGIGSS-----RAALFHLITHAYPKALLSpgsgsvihsmePIVGYCPDKSQN 380
Cdd:CHL00011 292 ASTSLGQRNLKKRIAYSSVSHMGFIII--GIGSItdtglNGAILQIISHGFIGAALF-----------FLAGTSYDRIRL 358
|
410 420
....*....|....*....|
gi 1583107296 381 IAL--MGGLRKYMPITGTTF 398
Cdd:CHL00011 359 VYLdeMGGIAIPMPKIFTMF 378
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
143-447 |
9.06e-08 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 55.31 E-value: 9.06e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 143 NLIQIYIFRELVGMCSYLLIGFWFTRPSAANACQKAFITNRVGDFGLLLGTSGFYWIIGSFKFEDLFErfneslANHEVS 222
Cdd:MTH00226 152 DIFMFYILFEGVLIPMYLILGIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLAS------CSHVVS 225
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 223 FFFATPCALLFLLGPVAKSAQFPLHVWLPDA-MEGPTPISAPIHAATMVAAGIFLVARMLPLLKALPLVMSPISWVGGIT 301
Cdd:MTH00226 226 EQTQKWIFLGIFLAMAVKIPIFPFHIWLPKAhVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQNLAPAVIAMGIV 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 302 ASL-GATIALAQKDLKRILAYSTMSQLG------------------YMMLASGIGSSraALFHLITHAYPKallspgsgs 362
Cdd:MTH00226 306 GIVyGSFATCRQIDVKRLVAYSSVAHMGlvsitlvthdiigltgsiFIMLAHGIVSS--LLFILVTILYDR--------- 374
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 363 vihsmepivgycpDKSQNIALMGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSKDEILADSWLYFPILGWIARFTAGLT 442
Cdd:MTH00226 375 -------------HHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSILSSFNWNPIIGVFVCSGVILS 441
|
....*
gi 1583107296 443 GFYMF 447
Cdd:MTH00226 442 AVYSF 446
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
137-351 |
9.80e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 51.99 E-value: 9.80e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 137 GLVLSPNLIQIYIFRELVGMCSYLLIGFWFTRPSAANACQKAFITNRVGDFGLLLGTSGFYWIIGSFKFedlferfnESL 216
Cdd:MTH00204 127 GVFSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDY--------QIL 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 217 ANHEVSFFFATPCALLFLLGPVAKSAQFPLHVWLPDAMegptpISAPIhAATMVAAGIFL-------VARMLPLLKALPL 289
Cdd:MTH00204 199 LNIKLPLSIQKWLLVGFFLSLAVKIPQIPFHIWLPQAH-----VEAPV-AGSVILAGILLklggygfLRFSWPLFPAASE 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 290 VMSP-ISWVGGITASLGATIALAQKDLKRILAYSTMSQLG------------------YMMLASGIGSSraALFHLITHA 350
Cdd:MTH00204 273 YFAPlIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGlvplglfthtieglvaavFLMLAHGFVSS--ALFIAVTFL 350
|
.
gi 1583107296 351 Y 351
Cdd:MTH00204 351 Y 351
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
154-454 |
2.36e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 50.35 E-value: 2.36e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 154 VGMCSYLLIGFWFTRPSAANACQKAFITNRVGDFGLLLGTSGFYWIIGSFKFEDLFERFNEslanhevsfffatpcaLLF 233
Cdd:MTH00200 35 INTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWTSGQWGISEMLGPLSE----------------TLI 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 234 LLGPVAKSAQFPLHVWLPDAMEGPTPISAPIHAATMVAAGIFLVARMLPLLKALPLVmspisWVGGITASLGATIALAQK 313
Cdd:MTH00200 99 LLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILL-----LLGLLSVLVGGWGGLNQT 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 314 DLKRILAYSTMSQLGYMMLASGIGSSRAALFHLIThaypkallspgsgsVIHSMEPIVGYCPDKSQNIALMGGLRKYMPI 393
Cdd:MTH00200 174 QLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLY--------------VIITLTVFLLLNLLNSTKINSLSSSKTKNPI 239
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1583107296 394 TGTTFLLGTLSLCGIPPLACFWSKDEILADSWLYFPILGWIARFTAGLTGFYMF-RMYFLTL 454
Cdd:MTH00200 240 LSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYlRLSYLTL 301
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
222-473 |
3.06e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 49.88 E-value: 3.06e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 222 SFFFATPCALLFLLGPVAKSAQFPLHVWLPDAMEGPTPISAPIHAATMVAAGIFLVARMLPLLKALPLVMspisWVGGIT 301
Cdd:MTH00144 79 NLSFSWFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLAYLLC----VISVLS 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 302 ASLGATIALAQKDLKRILAYSTMSQLGYMMLASGIGSSRAALFHLIthaypkallspgsgsVIHSMEPIVGYCPDKSQNI 381
Cdd:MTH00144 155 ALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLI---------------YIVSSGFLFFSLWSGDSGS 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 382 ALMGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSKDEILADSWLYFPILGWIARFTAGLT--GFYMFRMYFLTLEG--D 457
Cdd:MTH00144 220 MKDLGSLKPSYKTGLSIISLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLIslFFYLSVFFSSFLSSskS 299
|
250
....*....|....*.
gi 1583107296 458 FRANSSKNVISSYVSL 473
Cdd:MTH00144 300 KKSNSSKVLNSSIISL 315
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
143-351 |
6.15e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 49.28 E-value: 6.15e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 143 NLIQIYIFRELVGMCSYLLIGFWFTRPSAANACQKAFITNRVGDFGLLLGTSGFYWIIGSFKFEDLFE-RFNESLANhev 221
Cdd:MTH00217 130 DLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALCClKIEKELQY--- 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 222 sFFFatpcaLLFLLGPVAKSAQFPLHVWLPDAMegptpISAPIhAATMVAAGIFL-------VARMLPLLKALPLVMSPI 294
Cdd:MTH00217 207 -FIF-----LGFFLSLAIKIPKIPFHIWLPQAH-----VEAPV-AGSVILAGVLLklggygfIRFSWPLLPEASEYFSPL 274
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1583107296 295 SWVGGITASL-GATIALAQKDLKRILAYSTMSQLG------------------YMMLASGIGSSraALFHLITHAY 351
Cdd:MTH00217 275 IQTLSLLAIIyGSLTTCRQVDLKRIIAYSSVAHMGlvtlgifshtiqglvaaiFLMLAHGLVSS--ALFIAVTFLY 348
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
13-332 |
8.93e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 48.62 E-value: 8.93e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 13 LFPLLSSIIIglglLFFPKATrsFRRIYAIISTLLLSIAMVFSFhfflqQITGNSTYRYSWSwipnqNVTSEVG--YLID 90
Cdd:PRK06591 13 LFPLFGALLI----ISFRFIE--FARIITRICILSSLLVSIYGY-----SIIQNTELSYTMG-----GWTSKIGieYRLN 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 91 PLTSIMLVLVTTIGVMVMIHSD--------SYMSHDQGYVrFFAYLSLPNASMSGLVLSPNLIQIYIFRELVGMCSYLLI 162
Cdd:PRK06591 77 SLNQAIIVYLNLVLLFFLVFCHkitnqtilKYINNNRKSL-FYGILLFAHTGYLGMIATNDFFNLYVFIEISALSSYVLI 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 163 GFWfTRPSAANACQKAFITNRVGDFGLLLGTSGFYWIIGSFKFEDLFERFNESLANHEVsfffaTPCALLFLLGPVAKSA 242
Cdd:PRK06591 156 ASG-NNPKSLIGAFDYLIMGSIGATLILIAIGFLLSITGSLNMTDIAAYLQEHTNSRII-----TIAIGFFLIGAILKTA 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 243 QFPLHVWLPDAMEGPTPISAPIHAATMVAAGIFLVARMLPLLKALPLVMSPISWVGGITASLGATI----ALAQKDLKRI 318
Cdd:PRK06591 230 FFPMHFWMMRAYNNTASVILVYLAGISTIIGIYIIYKFTYIIIGYETIKTAITNFIRPIALATLIIapyfAYQAKNFKNI 309
|
330
....*....|....
gi 1583107296 319 LAYSTMSQLGYMML 332
Cdd:PRK06591 310 IIYSCFTQIGYVFL 323
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
93-351 |
1.04e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 48.44 E-value: 1.04e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 93 TSIMLVLVT--TIGVMVMIHSDSYMSHDQGYVRFFAYLSLpnasMSGLVLS---PNLIQIYIFRELVGMCSYLLIGFWFT 167
Cdd:MTH00205 58 LSLPLIMLSfwISLLMVLASYKVFKSNKNSKLFTVSVIML----LLILILSfsvDNLLLFYITFEASLIPTLILILGWGY 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 168 RPSAANACQKAFITNRVGDFGLLLGTSGFYWIIGSFKFEDLFERFNESLanheVSFFFATPCALLFLLgpvaKSAQFPLH 247
Cdd:MTH00205 134 QPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNFPLNFSDF----YLFLYWIFLMLAFLV----KLPMYFVH 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 248 VWLPDAMegptpISAPIhAATMVAAGIFL------VARMLPLLKAL-----PLVMSpISWVGGITASLgatIALAQKDLK 316
Cdd:MTH00205 206 LWLPKAH-----VEAPV-SGSMILAGVLLklggygLIRITSMLYKLnsnfsELFFS-ISLWGGVMTGM---ICLRQVDLK 275
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 1583107296 317 RILAYS-------------TMSQLGY-----MMLASGIGSSraALFHLITHAY 351
Cdd:MTH00205 276 SLIAYSsvghmglmvvgvfSNTSWGMngaiiMMVAHGLCSS--GMFALANVNY 326
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
209-424 |
1.70e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 48.32 E-value: 1.70e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 209 FERFNESLANHEVSFFFATpCALLFllgpvaKSAQFPLHVWLPDAMEG-PTPISAPIhaATMVAAGIFLVARMLPLLKAL 287
Cdd:MTH00198 288 LETTNIELRQGSLGYLFIT-VAILF------KLAAAPFHMWTPDVYEGaPTPTTALI--AIIPKFTVYILLTSLVITSKL 358
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 288 PLVMSPISWVggitasLGATIALAQKDLKRILAYSTMSQLGYMMLASGIGSSRaALFHLITHAYPKALLSPGSGSVIHSM 367
Cdd:MTH00198 359 LLSVAIISLV------VGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYE-SLQASWTYAVTYLVSALASFTVICTL 431
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1583107296 368 EPI-VGYCPDKSQNIALMGG-----------LRKYMPITGTTFLLGTLSLCGIPPLACFWSKDEILADS 424
Cdd:MTH00198 432 EEFgTRTPTSRQRDGSFGNYnlvrrlvdltiLSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGS 500
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
72-449 |
2.61e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 47.26 E-value: 2.61e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 72 SWSWIPNqnvTSEVGYL-------IDPLTSIMLVLVTTIGVMVMIHSDSYMSHdQGYVRFFAYLSLPNASMSGLVL---S 141
Cdd:MTH00127 38 SLTWLKN---LSETGWSslnlymaTDPLSTPLLVLTCWLLPLMILASQNHTAP-EPINRQRMYITLLTSLQIFLILafgA 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 142 PNLIQIYIFRELVGMCSYLLIGFWFTRPSAANACQKAFITNRVGDFGLLLGTSGFYWIIGSFKFEDLFERFNESLANHEV 221
Cdd:MTH00127 114 TEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSMLTLQYSQPLQLSSWAD 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 222 SFFFATpCALLFLLgpvaKSAQFPLHVWLPDAMEGPTPISAPIHAATMVAAGIFLVARMLPLLKALPLVMS-PISWVGGI 300
Cdd:MTH00127 194 KLWWAG-CLLAFLV----KMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDPLTKELSyPFIILALW 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 301 TASLGATIALAQKDLKRILAYSTMSQLGY------------------MMLASGIGSSraALFHLITHAYPKAllspgsgs 362
Cdd:MTH00127 269 GIIMTGSICLRQTDLKSLIAYSSVSHMGLvaggiliqtpwgftgaliLMIAHGLTSS--ALFCLANTNYERT-------- 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 363 vihsmepivgycpdKSQNIALMGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSKDEILAD----SWLYFPILGWIARFT 438
Cdd:MTH00127 339 --------------HSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSlfnwSPWTLALTGLGTLIT 404
|
410
....*....|.
gi 1583107296 439 AGlTGFYMFRM 449
Cdd:MTH00127 405 AG-YSLYMFLM 414
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
72-449 |
4.54e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 46.45 E-value: 4.54e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 72 SWSWIPNQNVTSEVGYL-IDPLTSIMLVLVTTIGVMVMIHSDSYMS-----HDQGYVRFFAYLSLpnasmsGLVL---SP 142
Cdd:MTH00068 40 MWFNLPSETMNFTNKYFgIDQISSPLLILTCWLLPLMILASQNHLKnepinRQRTYISMLIILQL------TLILafsAT 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 143 NLIQIYIFRELVGMCSYLLIGFWFTRPSAANACQK-AFITnRVGDFGLLLGTSGFYWIIGSFKFEdLFERFNESLANHEV 221
Cdd:MTH00068 114 ELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYfLFYT-LAGSLPLLIALLILQNSLGSLSLI-LLELMSPMQLMTYT 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 222 SFFFATPCALLFLLgpvaKSAQFPLHVWLPDAMegptpISAPIhAATMVAAGIFL------VARMLPLLkalPLVMSPIS 295
Cdd:MTH00068 192 NKIWWLACLLAFMV----KMPLYGLHLWLPKAH-----VEAPI-AGSMILAAVLLklggygILRISILL---TPLSKELS 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 296 WVGGITASLG----ATIALAQKDLKRILAYSTMSQLG------------------YMMLASGIGSSraALFHLITHAYPK 353
Cdd:MTH00068 259 YPFIILALWGvlmtSLICLRQTDLKSLIAYSSVSHMGlviaaaliqtpwsfsgaiILMISHGLTSS--ALFCLANTNYER 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 354 AllspgsgsvihsmepivgycpdKSQNIALMGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSKDEILAD----SWLYFP 429
Cdd:MTH00068 337 T----------------------HSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSlfnwSNWTIL 394
|
410 420
....*....|....*....|
gi 1583107296 430 ILGWIARFTAGLTgFYMFRM 449
Cdd:MTH00068 395 ITGLGTLITAAYT-LYMFLM 413
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
216-445 |
5.97e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 43.18 E-value: 5.97e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 216 LANHEVSFFFATPCALLFLLGPVAKSAQFPLHVWLPDAMEgptpiSAPIHAATMVAAGIFLVARMLPLLkaLPLVMSPIS 295
Cdd:PRK12664 133 ASGQAQNGQYTGYCKLLFMLGLLINCACFPASSWVVDAYP-----AASNFGIIVLSLFTTKVAALVLLL--FFSGEEILL 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 296 WVGGITASLGATIALAQKDLKRILAYSTMSQLGYMMLASGIGSSRAA-----LFHLITHAYPKALLSPGSGSVIHSMEPI 370
Cdd:PRK12664 206 FLGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGSSGVaigilILQIVLSVVYQTLLFMVADSVINRTRKF 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 371 vgycpdksqNIALMGGLRKyMPITGTTFLLGTLSLCGIPPLACFWSKDEILA-------DSWLY---FPILGWIARFTAG 440
Cdd:PRK12664 286 ---------NLNRVGGLFK-MSLEAMCCIIAILNMGAFPGTAGFVSKSLITHsidtaglTLVLYkklFLICSLLLFASVG 355
|
....*
gi 1583107296 441 LTGFY 445
Cdd:PRK12664 356 LKFFW 360
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
246-336 |
8.98e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 42.49 E-value: 8.98e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 246 LHVWLPDAMegptpISAPIhAATMVAAGIFL------VARMLPLLKALP-------LVMSpiSWvGGITASLgatIALAQ 312
Cdd:MTH00124 212 LHLWLPKAH-----VEAPI-AGSMVLAAILLklggygIIRITLLLPPLSntlhypfLTLA--LW-GALMTSL---ICLRQ 279
|
90 100
....*....|....*....|....
gi 1583107296 313 KDLKRILAYSTMSQLGYMMLASGI 336
Cdd:MTH00124 280 TDLKSLIAYSSVSHMGLVIAATMI 303
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
228-417 |
9.80e-04 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 42.07 E-value: 9.80e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 228 PCALLFLLGPVAKSAQFPLHVWLPDAMEGPTPISAPIHAATMVAAGIFLVARMLPLlKALPLVMSpiswVGGITASLGAT 307
Cdd:MTH00011 89 ITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSH-NILPMMTS----MAAMSALAGGL 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 308 IALAQKDLKRILAYSTMSQLGYMMLASGIGSSRAALFhLITHAYpkallspgsgsVIHSMEPIVGYCPDKSQNiaLMGGL 387
Cdd:MTH00011 164 GGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILY-FMTYII-----------ITTPLMLLFAYLNAFSTK--FNSKI 229
|
170 180 190
....*....|....*....|....*....|
gi 1583107296 388 RKYMPITGTTFLLGTLSLCGIPPLACFWSK 417
Cdd:MTH00011 230 SSMSQTTSMSLFIMLLSLGGLPPFTGFMPK 259
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
245-421 |
1.23e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 41.73 E-value: 1.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 245 PLHVWLPDAMEGPTPISAPIHAATMVAAGIFLVARMLPLLKALPLVMSPIswvggITASLGATIALAQKDLKRILAYSTM 324
Cdd:MTH00112 110 PFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAI-----LSTLIGGWGGLNQTQLRKIMAFSSI 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 325 SQLGYMMLASGIGSSRAAL-FHLITHAYPKALLSpgsgsvIHSMepivgycpdKSQNIALMGGLRKYMPITGTTFLLGTL 403
Cdd:MTH00112 185 AHLGWMIAIITYSPKLTLLtFYIYILMTTPMFLT------LNTT---------STKTLKDMMTSWTKSPTLNTTLMLTLL 249
|
170
....*....|....*...
gi 1583107296 404 SLCGIPPLACFWSKDEIL 421
Cdd:MTH00112 250 SLAGLPPLTGFMPKWLIL 267
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
94-411 |
2.20e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 41.31 E-value: 2.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 94 SIMLVLVTTIGVMVMIHSDSYMSHDQGYVRFFAYLSLpnaSMSGLVLSPNLIQIYIFRELVGMCSYLLIGFWftrpsaAN 173
Cdd:PRK06459 47 SFFSIISTIVWILASLYSIEYDHYGKWLSSLYILTIL---GMAIVLTSDNYLLFLAGWEIMTIPSYVAIALT------KK 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 174 ACQKAFITNRVGDFGLLLGTSGFYW---IIGSFKFEdlferfneslanhevsfFFATPCALLFL-LGPVAKSAQFPLHV- 248
Cdd:PRK06459 118 NKRPAFVFMAFGELSTVLILAGFAWafiISGTTNFS-----------------YLPSPVPLILAsFGFIIKMGMMPFLVs 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 249 -WLPDAMEGPTPISAPIHAATMVAAGIFLVARMLPLLKALPL--VMSPISWVGGITASLGATIALAQKDLKRILAYST-- 323
Cdd:PRK06459 181 eWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPIgyFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTie 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583107296 324 -----MSQLGYMMLASGIGSS------RAALFHLITHAYPKALLSPGSGSVihsmepivgycpdKSQNIALMGGLRKYMP 392
Cdd:PRK06459 261 nngaiLVALGLYMVTKQLITSiehfslITVILYSFAHSVAKTGLFLSSGLQ-------------EKQSITYSKKIRNRWI 327
|
330
....*....|....*....
gi 1583107296 393 ITGTTflLGTLSLCGIPPL 411
Cdd:PRK06459 328 ELGLT--LLASSLSGLLPN 344
|
|
| |
