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Conserved domains on  [gi|1314948406|ref|YP_009444544|]
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NADH dehydrogenase subunit 4L (mitochondrion) [Tolypocladium inflatum]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Oxidored_q2 super family cl00492
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
3-87 2.80e-17

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


The actual alignment was detected with superfamily member PRK05715:

Pssm-ID: 444937  Cd Length: 100  Bit Score: 69.82  E-value: 2.80e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314948406   3 LTLVLFLIGILGfVFNRKNIILMLISIEIMLLSITFLILVSSINLDDIIGQTYAIYIIVVAGAESAIGLAILVAFYRLRG 82
Cdd:PRK05715   10 LAAILFCIGLVG-LLLRRNAIVVLMSIELMLNAVNLNFVAFSSYLGDLDGQVFAFFVITVAAAEAAIGLAILLQLYRNRG 88


                  ....*
gi 1314948406  83 SIAIE 87
Cdd:PRK05715   89 TIDVD 93
 
Name Accession Description Interval E-value
PRK05715 PRK05715
NADH-quinone oxidoreductase subunit NuoK;
3-87 2.80e-17

NADH-quinone oxidoreductase subunit NuoK;


Pssm-ID: 180218  Cd Length: 100  Bit Score: 69.82  E-value: 2.80e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314948406   3 LTLVLFLIGILGfVFNRKNIILMLISIEIMLLSITFLILVSSINLDDIIGQTYAIYIIVVAGAESAIGLAILVAFYRLRG 82
Cdd:PRK05715   10 LAAILFCIGLVG-LLLRRNAIVVLMSIELMLNAVNLNFVAFSSYLGDLDGQVFAFFVITVAAAEAAIGLAILLQLYRNRG 88


                  ....*
gi 1314948406  83 SIAIE 87
Cdd:PRK05715   89 TIDVD 93
NuoK COG0713
NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; ...
 3-87 1.52e-15

NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440477  Cd Length: 99  Bit Score: 65.08  E-value: 1.52e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314948406  3 LTLVLFLIGILGfVFNRKNIILMLISIEIMLLSITFLILVSSINLDDIIGQTYAIYIIVVAGAESAIGLAILVAFYRLRG 82
Cdd:COG0713    9 LAAILFAIGLYG-VLTRRNLIVVLMSIELMLNAVNLNLVAFSRYLGDLDGQVFALFVIAVAAAEVAVGLAIIVALYRNRG 87


                 ....*
gi 1314948406 83 SIAIE 87
Cdd:COG0713   88 TIDVD 92
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
3-87 7.96e-10

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 50.64  E-value: 7.96e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314948406  3 LTLVLFLIGILGFVFnRKNIILMLISIEIMLLSITFLILVSSINLDDIIGQTYAIYIIVVAGAESAIGLAILVAFYRLRG 82
Cdd:pfam00420  5 LSGLLFLIGLYGLLL-RRNLLRVLLSLELMLNAVNLALVLFGRLTADPLPQALILTAIVIAAAEAAVGLALLVRIYRTHG 83


                 ....*
gi 1314948406 83 SIAIE 87
Cdd:pfam00420 84 TDDVD 88
 
Name Accession Description Interval E-value
PRK05715 PRK05715
NADH-quinone oxidoreductase subunit NuoK;
3-87 2.80e-17

NADH-quinone oxidoreductase subunit NuoK;


Pssm-ID: 180218  Cd Length: 100  Bit Score: 69.82  E-value: 2.80e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314948406   3 LTLVLFLIGILGfVFNRKNIILMLISIEIMLLSITFLILVSSINLDDIIGQTYAIYIIVVAGAESAIGLAILVAFYRLRG 82
Cdd:PRK05715   10 LAAILFCIGLVG-LLLRRNAIVVLMSIELMLNAVNLNFVAFSSYLGDLDGQVFAFFVITVAAAEAAIGLAILLQLYRNRG 88


                  ....*
gi 1314948406  83 SIAIE 87
Cdd:PRK05715   89 TIDVD 93
ND4L MTH00180
NADH dehydrogenase subunit 4L; Provisional
 5-86 1.05e-16

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177231  Cd Length: 99  Bit Score: 68.13  E-value: 1.05e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314948406  5 LVLFLIGILGFVFNRKNIILMLISIEIMLLSITFLILVSSINLDDIIGQTYAIYIIVVAGAESAIGLAILVAFYRLRGSI 84
Cdd:MTH00180  10 IILFILGVLGIVLNRSNLIIMLMSIELMLLAISLLFLINSVAIDNLIGQIFTIMILTVAAAESAIGLAILVAYYRIRGTI 89


                 ..
gi 1314948406 85 AI 86
Cdd:MTH00180  90 AV 91
NuoK COG0713
NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; ...
 3-87 1.52e-15

NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440477  Cd Length: 99  Bit Score: 65.08  E-value: 1.52e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314948406  3 LTLVLFLIGILGfVFNRKNIILMLISIEIMLLSITFLILVSSINLDDIIGQTYAIYIIVVAGAESAIGLAILVAFYRLRG 82
Cdd:COG0713    9 LAAILFAIGLYG-VLTRRNLIVVLMSIELMLNAVNLNLVAFSRYLGDLDGQVFALFVIAVAAAEVAVGLAIIVALYRNRG 87


                 ....*
gi 1314948406 83 SIAIE 87
Cdd:COG0713   88 TIDVD 92
ND4L MTH00001
NADH dehydrogenase subunit 4L; Provisional
 1-86 2.73e-15

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177099  Cd Length: 99  Bit Score: 64.70  E-value: 2.73e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314948406  1 MSLTLVLFLIGILGFVFNRKNIILMLISIEIMLLSITFLILVSSINLDDIIGQTYAIYIIVVAGAESAIGLAILVAFYRL 80
Cdd:MTH00001   6 LILVVILFLLGIWGIILNRGHFIIMLVSIELVLLSTFFLFLINSIEIDLLIEQIFTIMGLTIAAAESAIGLAIMVAYYRI 85


                 ....*.
gi 1314948406 81 RGSIAI 86
Cdd:MTH00001  86 RGTISL 91
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
3-87 7.96e-10

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 50.64  E-value: 7.96e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314948406  3 LTLVLFLIGILGFVFnRKNIILMLISIEIMLLSITFLILVSSINLDDIIGQTYAIYIIVVAGAESAIGLAILVAFYRLRG 82
Cdd:pfam00420  5 LSGLLFLIGLYGLLL-RRNLLRVLLSLELMLNAVNLALVLFGRLTADPLPQALILTAIVIAAAEAAVGLALLVRIYRTHG 83


                 ....*
gi 1314948406 83 SIAIE 87
Cdd:pfam00420 84 TDDVD 88
ND4L MTH00192
NADH dehydrogenase subunit 4L; Provisional
 3-87 5.87e-09

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177240  Cd Length: 99  Bit Score: 48.38  E-value: 5.87e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314948406  3 LTLVLFLIGILGFVFNRKNIILMLISIEIMLLSITFLILVSSINLDDIIGQTYAIYIIVVAGAESAIGLAILVAFYRLRG 82
Cdd:MTH00192   8 VSIILFTTGVSGIIINKNNIILILMSIELILLAISYLLIVYSVTLDNLLGIIFSLMVLTVAAAESAIGLAILVAYFRLTG 87


                 ....*
gi 1314948406 83 SIAIE 87
Cdd:MTH00192  88 TITIK 92
ndhE CHL00015
NADH dehydrogenase subunit 4L
 7-87 6.36e-09

NADH dehydrogenase subunit 4L


Pssm-ID: 176958  Cd Length: 101  Bit Score: 48.46  E-value: 6.36e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314948406   7 LFLIGILGFVFNRkNIILMLISIEIMLLSITFLILVSSINLD--DIIGQTYAIYIIVVAGAESAIGLAILVAFYRLRGSI 84
Cdd:CHL00015   13 LFSIGIYGLITSR-NMVRALMCLELILNAVNINFVTFSDFFDsrQLKGDIFSIFVIAIAAAEAAIGLAIVSSIYRNRKST 91


                  ...
gi 1314948406  85 AIE 87
Cdd:CHL00015   92 RIN 94
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 1-83 1.49e-06

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177184  Cd Length: 98  Bit Score: 42.14  E-value: 1.49e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314948406  1 MSLTLVL----FLIGILGFVFNRKNIILMLISIEIMLLSITFLILVSSINLDDIIGQTYAIYIIVVAGAESAIGLAILVA 76
Cdd:MTH00125   1 MTPTHFSlytaFMLSLLGLSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPMPIILLTFSACEAGTGLALLVA 80


                 ....*..
gi 1314948406 77 FYRLRGS 83
Cdd:MTH00125  81 TTRTHGS 87
ND4L MTH00149
NADH dehydrogenase subunit 4L; Provisional
 3-83 1.04e-05

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214434  Cd Length: 97  Bit Score: 40.21  E-value: 1.04e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314948406  3 LTLVLFLIGILGFVFNRKNIILMLISIEIMLLSITFLILVSSINlddIIGQTYAIYIIVVAGA-ESAIGLAILVAFYRLR 81
Cdd:MTH00149   8 LSLFGFLMGVFALLFQYKHLLSILLSLEALMLSLLVMMFSSSGL---ISFSSYLFLIILTFGAcEASLGLSLLVSLIRLH 84


                 ..
gi 1314948406 82 GS 83
Cdd:MTH00149  85 GN 86
ND4L MTH00181
NADH dehydrogenase subunit 4L; Provisional
 1-83 9.39e-05

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214450  Cd Length: 93  Bit Score: 37.62  E-value: 9.39e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314948406  1 MSLTLVLFLIGILGFVFNRKNIILMLISIEIMLLSITFLILVSSINLDDIIGQTYAIYIIVVAGAESAIGLAILVAFYRL 80
Cdd:MTH00181   2 MFVFISAFILLLLGLSLYKTHLLSLLLCLEGMMLFLFLLLALFSLLSSSSSMLMFGLILLTFSACEAVLGLSLLVATNRT 81


                 ...
gi 1314948406 81 RGS 83
Cdd:MTH00181  82 HGS 84
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 1-83 1.95e-04

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 36.67  E-value: 1.95e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314948406  1 MSLTLVLFLIGILGFVFNRKNIILMLISIEIMLLSITFLILVSSINLDDIIgqTYAIYIIVVAGAESAIGLAILVAFYRL 80
Cdd:MTH00162   4 LLIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYEL--YFLLFFLTFSVCEGALGLSILVSMIRS 81


                 ...
gi 1314948406 81 RGS 83
Cdd:MTH00162  82 HGN 84
ND4L MTH00067
NADH dehydrogenase subunit 4L; Provisional
 1-83 8.82e-04

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177139  Cd Length: 98  Bit Score: 34.96  E-value: 8.82e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314948406  1 MSLTLVL----FLIGILGFVFNRKNIILMLISIEIMLLSITFLILVSSINLDDIIGQTYAIYIIVVAGAESAIGLAILVA 76
Cdd:MTH00067   1 MSPTYFTfysaFLLGLMGLAFHRTHLLSALLCLEGMMLSLFIALSLWSTQFESLSYFSLPMFMLTFSACEASTGLALMVA 80


                 ....*..
gi 1314948406 77 FYRLRGS 83
Cdd:MTH00067  81 TTRTHGT 87
ND4L MTH00126
NADH dehydrogenase subunit 4L; Provisional
 8-83 3.76e-03

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177185  Cd Length: 98  Bit Score: 33.40  E-value: 3.76e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1314948406  8 FLIGILGFVFNRKNIILMLISIEIMLLSITFLILVSSINLDDIIGQTYAIYIIVVAGAESAIGLAILVAFYRLRGS 83
Cdd:MTH00126  12 FILGLMGLAFHRTHLLSALLCLEGMMLSLFIALSLWALQLESTSFSAAPMLLLAFSACEASAGLALLVATARTHGT 87
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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