|
Name |
Accession |
Description |
Interval |
E-value |
| ATP6 |
MTH00120 |
ATP synthase F0 subunit 6; Provisional |
1-227 |
2.53e-106 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177181 Cd Length: 227 Bit Score: 305.60 E-value: 2.53e-106
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992330624 1 MNLSFFDQFSSPSLLGIPLILISMTFPALLLPSLDNRWITNRLSTLQLWFINLVTKQLMMPLDKKGHKWALILTSLMIFL 80
Cdd:MTH00120 1 MNLNFFDQFSSPELLGIPLILLAMLIPALLIPSPKNRLLTNRLTTLQLWLIKLITKQLMLPLNKKGHKWALILTSLMLLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992330624 81 LLINLLGLLPYTFTPTTQLSMNLALAFPLWLATLLTGLRNQPSASLGHLLPEGTPTPLIPALILIETTSLLIRPLALGVR 160
Cdd:MTH00120 81 LLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIRPLALGVR 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 992330624 161 LTANLTAGHLLIQLISTATTALFSTMPMVSLLTLLVLFLLTILEVAVAMIQAYVFVLLLSLYLQENI 227
Cdd:MTH00120 161 LTANLTAGHLLIQLISTATLNLLPTMPTLSLLTLIILLLLTILELAVAMIQAYVFVLLLSLYLQENT 227
|
|
| ATP_synt_6_or_A |
TIGR01131 |
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ... |
6-227 |
9.51e-46 |
|
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]
Pssm-ID: 273458 Cd Length: 226 Bit Score: 151.59 E-value: 9.51e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992330624 6 FDQFSSPSLLGIPLILISMTFPA-----LLLPSLDNRWITNRLSTLQLWFINLVTKQLMMPLDKKGHKWALILTSLMIFL 80
Cdd:TIGR01131 2 FSQFDISPITLFSLTLLSLILLLsllifLISSSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLFI 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992330624 81 LLINLLGLLPYTFTPTTQLSMNLALAFPLWLATLLTGLRNQPSASLGHLLPEGTPTPLIPALILIETTSLLIRPLALGVR 160
Cdd:TIGR01131 82 LISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSVR 161
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 992330624 161 LTANLTAGHLLIQLISTATTALFStmPMVSLLTLLVLFLLTILEVAVAMIQAYVFVLLLSLYLQENI 227
Cdd:TIGR01131 162 LFANISAGHLLLTLLSGLLFSLMS--SAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
|
|
| ATP-synt_Fo_a_6 |
cd00310 |
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ... |
90-224 |
4.01e-33 |
|
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.
Pssm-ID: 349411 [Multi-domain] Cd Length: 156 Bit Score: 117.12 E-value: 4.01e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992330624 90 PYTFTPTTQLSMNLALAFPLWLATLLTGLRNQPSASLGHLLPEGTPTPLIPALILIETTSLLIRPLALGVRLTANLTAGH 169
Cdd:cd00310 25 PYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELISELIRPLSLSVRLFANMFAGH 104
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 992330624 170 LLIQLISTATTALFStmpMVSLLTLLVLFLLTILEVAVAMIQAYVFVLLLSLYLQ 224
Cdd:cd00310 105 LLLALLSGLVPSLLS---SVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
|
|
| ATP-synt_A |
pfam00119 |
ATP synthase A chain; |
90-224 |
3.01e-28 |
|
ATP synthase A chain;
Pssm-ID: 459679 [Multi-domain] Cd Length: 216 Bit Score: 106.03 E-value: 3.01e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992330624 90 PYTFTPTTQLSMNLALAFPLWLATLLTGLRNQPSAS-LGHLLPEGTPTPLIPALILIETTSLLIRPLALGVRLTANLTAG 168
Cdd:pfam00119 81 PGGFTVTADINVTLALALIVFLLVHYYGIKKHGLGGyFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAG 160
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 992330624 169 HLLIQLISTATTALFSTMPMVSLLTLLVLFLLTILEVAVAMIQAYVFVLLLSLYLQ 224
Cdd:pfam00119 161 HLLLLLLAGLIFALLSAGFLLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
|
|
| AtpB |
COG0356 |
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ... |
90-225 |
3.11e-16 |
|
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase
Pssm-ID: 440125 [Multi-domain] Cd Length: 212 Bit Score: 74.34 E-value: 3.11e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992330624 90 PYTFTPTTQLSMNLALAFPLWLATLLTGLRNQ-PSASLGHLLPEGTPtPLIPALILIETTSLLIRPLALGVRLTANLTAG 168
Cdd:COG0356 78 PGLFPPTADINVTLALALIVFVLVHYYGIKKKgLGGYLKHLFFPPFP-WLAPLMLPIEIISELARPLSLSLRLFGNMFAG 156
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 992330624 169 HLLIQLIstattALFSTMPMVSLLTLLVLFLLTILEVAVAMIQAYVFVLLLSLYLQE 225
Cdd:COG0356 157 HIILLLL-----AGLAPFLLLGVLSLLLPVAWTAFELLVGFLQAYIFTMLTAVYISL 208
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| ATP6 |
MTH00120 |
ATP synthase F0 subunit 6; Provisional |
1-227 |
2.53e-106 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177181 Cd Length: 227 Bit Score: 305.60 E-value: 2.53e-106
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992330624 1 MNLSFFDQFSSPSLLGIPLILISMTFPALLLPSLDNRWITNRLSTLQLWFINLVTKQLMMPLDKKGHKWALILTSLMIFL 80
Cdd:MTH00120 1 MNLNFFDQFSSPELLGIPLILLAMLIPALLIPSPKNRLLTNRLTTLQLWLIKLITKQLMLPLNKKGHKWALILTSLMLLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992330624 81 LLINLLGLLPYTFTPTTQLSMNLALAFPLWLATLLTGLRNQPSASLGHLLPEGTPTPLIPALILIETTSLLIRPLALGVR 160
Cdd:MTH00120 81 LLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIRPLALGVR 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 992330624 161 LTANLTAGHLLIQLISTATTALFSTMPMVSLLTLLVLFLLTILEVAVAMIQAYVFVLLLSLYLQENI 227
Cdd:MTH00120 161 LTANLTAGHLLIQLISTATLNLLPTMPTLSLLTLIILLLLTILELAVAMIQAYVFVLLLSLYLQENT 227
|
|
| ATP6 |
MTH00132 |
ATP synthase F0 subunit 6; Provisional |
1-227 |
1.68e-105 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177190 Cd Length: 227 Bit Score: 303.72 E-value: 1.68e-105
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992330624 1 MNLSFFDQFSSPSLLGIPLILISMTFPALLLPSLDNRWITNRLSTLQLWFINLVTKQLMMPLDKKGHKWALILTSLMIFL 80
Cdd:MTH00132 1 MTLSFFDQFMSPTYLGIPLIALALTLPWILFPTPTSRWLNNRLLTLQGWFINRFTQQLLLPLNVGGHKWALLLTSLMLFL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992330624 81 LLINLLGLLPYTFTPTTQLSMNLALAFPLWLATLLTGLRNQPSASLGHLLPEGTPTPLIPALILIETTSLLIRPLALGVR 160
Cdd:MTH00132 81 ITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISLFIRPLALGVR 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 992330624 161 LTANLTAGHLLIQLISTATTALFSTMPMVSLLTLLVLFLLTILEVAVAMIQAYVFVLLLSLYLQENI 227
Cdd:MTH00132 161 LTANLTAGHLLIQLIATAAFVLLPLMPTVAILTATLLFLLTLLEVAVAMIQAYVFVLLLSLYLQENV 227
|
|
| ATP6 |
MTH00073 |
ATP synthase F0 subunit 6; Provisional |
1-227 |
1.91e-102 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177144 Cd Length: 227 Bit Score: 295.72 E-value: 1.91e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992330624 1 MNLSFFDQFSSPSLLGIPLILISMTFPALLLPSLDNRWITNRLSTLQLWFINLVTKQLMMPLDKKGHKWALILTSLMIFL 80
Cdd:MTH00073 1 MNLSFFDQFLSPTLLGIPLIMLAMLLPWLLFPTPTNKWLNNRLSTLQIWFLQNFTKQLMLPLNTPGHKWALILTSLMVFL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992330624 81 LLINLLGLLPYTFTPTTQLSMNLALAFPLWLATLLTGLRNQPSASLGHLLPEGTPTPLIPALILIETTSLLIRPLALGVR 160
Cdd:MTH00073 81 ITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISLFIRPLALGVR 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 992330624 161 LTANLTAGHLLIQLISTATTALFSTMPMVSLLTLLVLFLLTILEVAVAMIQAYVFVLLLSLYLQENI 227
Cdd:MTH00073 161 LTANLTAGHLLIQLISTATLVLLPLMPTVSILTMIVLFLLTLLEIAVAMIQAYVFVLLLSLYLQENV 227
|
|
| ATP6 |
MTH00179 |
ATP synthase F0 subunit 6; Provisional |
1-226 |
3.22e-80 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177230 Cd Length: 227 Bit Score: 239.46 E-value: 3.22e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992330624 1 MNLSFFDQFSSPSLLGIPLILISMTFPALLLPSLDNRWITNRLSTLQLWFINLVTKQLMMPLDKKGHKWALILTSLMIFL 80
Cdd:MTH00179 1 MMLSMFDQFESPSLLGIPLLALALLLPWLLFPSLTNRWLNNRLSTLQSWFFGSFTFQLMQPINKKGHKWAVLFLSLMLFL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992330624 81 LLINLLGLLPYTFTPTTQLSMNLALAFPLWLATLLTGLRNQPSASLGHLLPEGTPTPLIPALILIETTSLLIRPLALGVR 160
Cdd:MTH00179 81 LTLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALGVR 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 992330624 161 LTANLTAGHLLIQLISTATTALFSTMPMVSLLTLLVLFLLTILEVAVAMIQAYVFVLLLSLYLQEN 226
Cdd:MTH00179 161 LTANITAGHLLMHLISSAVFVLMNFMGMVALLTLLVLFLLTLLEVAVAMIQAYVFVLLLSLYLQEN 226
|
|
| ATP6 |
MTH00101 |
ATP synthase F0 subunit 6; Validated |
1-226 |
2.10e-76 |
|
ATP synthase F0 subunit 6; Validated
Pssm-ID: 177163 Cd Length: 226 Bit Score: 229.84 E-value: 2.10e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992330624 1 MNLSFFDQFSSPSLLGIPLILISMTFPALLLPSlDNRWITNRLSTLQLWFINLVTKQLMMPLDKKGHKWALILTSLMIFL 80
Cdd:MTH00101 1 MNENLFASFITPTILGLPIVTLIIMFPSLLFPT-PNRLINNRLISIQQWLIQLTSKQMMTIHNTKGQTWSLMLMSLILFI 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992330624 81 LLINLLGLLPYTFTPTTQLSMNLALAFPLWLATLLTGLRNQPSASLGHLLPEGTPTPLIPALILIETTSLLIRPLALGVR 160
Cdd:MTH00101 80 GSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVR 159
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 992330624 161 LTANLTAGHLLIQLISTATTALFSTMPMVSLLTLLVLFLLTILEVAVAMIQAYVFVLLLSLYLQEN 226
Cdd:MTH00101 160 LTANITAGHLLIHLIGGATLALMSISTTTALITFIILILLTILEFAVALIQAYVFTLLVSLYLHDN 225
|
|
| ATP_synt_6_or_A |
TIGR01131 |
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ... |
6-227 |
9.51e-46 |
|
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]
Pssm-ID: 273458 Cd Length: 226 Bit Score: 151.59 E-value: 9.51e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992330624 6 FDQFSSPSLLGIPLILISMTFPA-----LLLPSLDNRWITNRLSTLQLWFINLVTKQLMMPLDKKGHKWALILTSLMIFL 80
Cdd:TIGR01131 2 FSQFDISPITLFSLTLLSLILLLsllifLISSSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLFI 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992330624 81 LLINLLGLLPYTFTPTTQLSMNLALAFPLWLATLLTGLRNQPSASLGHLLPEGTPTPLIPALILIETTSLLIRPLALGVR 160
Cdd:TIGR01131 82 LISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSVR 161
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 992330624 161 LTANLTAGHLLIQLISTATTALFStmPMVSLLTLLVLFLLTILEVAVAMIQAYVFVLLLSLYLQENI 227
Cdd:TIGR01131 162 LFANISAGHLLLTLLSGLLFSLMS--SAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
|
|
| ATP6 |
MTH00035 |
ATP synthase F0 subunit 6; Validated |
1-227 |
3.92e-45 |
|
ATP synthase F0 subunit 6; Validated
Pssm-ID: 177110 Cd Length: 229 Bit Score: 150.12 E-value: 3.92e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992330624 1 MNLSFFDQFSSPSLLGIPLILISMTFPAL-LLPSLDNRWITNRLSTLQLWFINLVTKQLMMPLDKKGHKWALILTSLMIF 79
Cdd:MTH00035 3 INNSIFGQFSPDTILFIPLTLLSSVIALSwLFFINPTNWLPSRSQSIWLTFRQEILKLIFQNTNPNTAPWAGLLTTVFIL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992330624 80 LLLINLLGLLPYTFTPTTQLSMNLALAFPLWLATLLTGLRNQPSASLGHLLPEGTPTPLIPALILIETTSLLIRPLALGV 159
Cdd:MTH00035 83 ILSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIALGL 162
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 992330624 160 RLTANLTAGHLLIQLISTATTALFSTmPMVSLLTLLVLFLLTILEVAVAMIQAYVFVLLLSLYLQENI 227
Cdd:MTH00035 163 RLAANLTAGHLLIFLLSTAIWELSNS-PLISIITLIIFFLLFILEIGVACIQAYVFTALVHFYLEQNI 229
|
|
| ATP6 |
MTH00157 |
ATP synthase F0 subunit 6; Provisional |
1-225 |
3.27e-39 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214441 Cd Length: 223 Bit Score: 134.53 E-value: 3.27e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992330624 1 MNL-SFFDQFSSPSLlgiPLILISMTFPALLLPSLdnRW-ITNRLSTLQLWFINLVTKQLMMPLDKKGHKWALILTSLMI 78
Cdd:MTH00157 3 TNLfSIFDPSTSFNL---SLNWLSTFLGLLFIPSS--FWlIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFS 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992330624 79 FLLLINLLGLLPYTFTPTTQLSMNLALAFPLWLATLLTGLRNQPSASLGHLLPEGTPTPLIPALILIETTSLLIRPLALG 158
Cdd:MTH00157 78 FILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLA 157
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 992330624 159 VRLTANLTAGHLLIQLISTATTALFSTMPMVSlltLLVLFLLTILEVAVAMIQAYVFVLLLSLYLQE 225
Cdd:MTH00157 158 VRLAANMIAGHLLLTLLGNTGPSLSSMILSIL---ILIQILLLILESAVAIIQSYVFSVLSTLYSSE 221
|
|
| ATP6 |
MTH00176 |
ATP synthase F0 subunit 6; Provisional |
1-226 |
8.76e-38 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214449 Cd Length: 229 Bit Score: 131.31 E-value: 8.76e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992330624 1 MNLSFFDQFSSPSLLGIPLIL---ISMTFPALLLPSLdNRWITNRLSTLQLWFINLVTKQLMMPLDKKGHKWALILTSLM 77
Cdd:MTH00176 1 MLVDLFSSFDPPNKNIFSMISlswITLLLFLLLMPSS-VWFCPSKLQVFMLMFSTFLPEMILRSNGSYILGSASIIISLF 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992330624 78 IFLLLINLLGLLPYTFTPTTQLSMNLALAFPLWLATLLTGLRNQPSASLGHLLPEGTPTPLIPALILIETTSLLIRPLAL 157
Cdd:MTH00176 80 ILVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTL 159
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 992330624 158 GVRLTANLTAGHLLIQLISTATTALFSTMPMVSLLTLLVLFLLTILEVAVAMIQAYVFVLLLSLYLQEN 226
Cdd:MTH00176 160 AVRLAANLSAGHLLLGLLGAAMWGLLPVSPLIGFLLLIVQILYFMFEIAVCMIQAYVFTLLLSLYLDEH 228
|
|
| ATP6 |
MTH00173 |
ATP synthase F0 subunit 6; Provisional |
4-225 |
2.33e-35 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214448 Cd Length: 231 Bit Score: 124.98 E-value: 2.33e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992330624 4 SFFDQFSSPSLLGIPLILISMTFPALLLPSLdNRWITNRLSTLQLWFINLVTKQLMMPLDKKGHKWALILTSLMIFLLLI 83
Cdd:MTH00173 7 SSFDDHNSSFSSLSFLMWLLSLMSLFFFSSS-VWVSSSNLSSVFKLFVLTVSSQVTRSSGLNLGGFSLLLSSLFLFLISL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992330624 84 NLLGLLPYTFTPTTQLSMNLALAFPLWLATLLTGLRNQPSASLGHLLPEGTPTPLIPALILIETTSLLIRPLALGVRLTA 163
Cdd:MTH00173 86 NLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTLTVRLLA 165
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 992330624 164 NLTAGHLLIQLISTATTA-LFSTMPMVSLLTLLVLFLLTILEVAVAMIQAYVFVLLLSLYLQE 225
Cdd:MTH00173 166 NISAGHIVLTLIGNYLSSsLFSSSVVSLLLVLLIQVGYFIFEVAVMLIQAYIFTLLIKLYSDE 228
|
|
| ATP-synt_Fo_a_6 |
cd00310 |
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ... |
90-224 |
4.01e-33 |
|
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.
Pssm-ID: 349411 [Multi-domain] Cd Length: 156 Bit Score: 117.12 E-value: 4.01e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992330624 90 PYTFTPTTQLSMNLALAFPLWLATLLTGLRNQPSASLGHLLPEGTPTPLIPALILIETTSLLIRPLALGVRLTANLTAGH 169
Cdd:cd00310 25 PYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELISELIRPLSLSVRLFANMFAGH 104
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 992330624 170 LLIQLISTATTALFStmpMVSLLTLLVLFLLTILEVAVAMIQAYVFVLLLSLYLQ 224
Cdd:cd00310 105 LLLALLSGLVPSLLS---SVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
|
|
| ATP6 |
MTH00005 |
ATP synthase F0 subunit 6; Provisional |
18-222 |
8.54e-30 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 164583 Cd Length: 231 Bit Score: 110.59 E-value: 8.54e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992330624 18 PLILISMTFPALLLPSlDNRWIT-NRLSTLQLWFINLVTKQLMMPLDKKGHKWALILTSLMIFLLLINLLGLLPYTFTPT 96
Cdd:MTH00005 22 STAFWAFNFSIILLLS-SSFWITpNRLSSIMSPPKSTMHTQLSRTFGKHLKGFSSLISALFTMIILMNLSGLLPYVFSTS 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992330624 97 TQLSMNLALAFPLWLATLLTGLRNQPSASLGHLLPEGTPTPLIPALILIETTSLLIRPLALGVRLTANLTAGHLLIQLIS 176
Cdd:MTH00005 101 SHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPITLSFRLAANMSAGHIVLSLIG 180
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 992330624 177 TATTALFSTMPMVSLLTLLVLFLLTILEVAVAMIQAYVFVLLLSLY 222
Cdd:MTH00005 181 IYAASALFSSISSTILLILTQMGYILFEVGICLIQAYIFCLLLSLY 226
|
|
| ATP-synt_A |
pfam00119 |
ATP synthase A chain; |
90-224 |
3.01e-28 |
|
ATP synthase A chain;
Pssm-ID: 459679 [Multi-domain] Cd Length: 216 Bit Score: 106.03 E-value: 3.01e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992330624 90 PYTFTPTTQLSMNLALAFPLWLATLLTGLRNQPSAS-LGHLLPEGTPTPLIPALILIETTSLLIRPLALGVRLTANLTAG 168
Cdd:pfam00119 81 PGGFTVTADINVTLALALIVFLLVHYYGIKKHGLGGyFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAG 160
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 992330624 169 HLLIQLISTATTALFSTMPMVSLLTLLVLFLLTILEVAVAMIQAYVFVLLLSLYLQ 224
Cdd:pfam00119 161 HLLLLLLAGLIFALLSAGFLLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
|
|
| ATP6 |
MTH00172 |
ATP synthase F0 subunit 6; Provisional |
1-227 |
2.34e-27 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214447 Cd Length: 232 Bit Score: 104.35 E-value: 2.34e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992330624 1 MNLSFFDQFSSPSLLGI--PLILISMTFPALLLPSLDNRWITNRLSTLQLWFINLVTKQLMMPLDKKGHKWALILTSLMI 78
Cdd:MTH00172 1 MSSSYFDQFNIVWLIGLtnSSIMMILVIIVVLLLFKGIKLIPKRWQSIIEIIYNHFHGVVKDNLGNEGLKYFPFIISLFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992330624 79 FLLLINLLGLLPYTFTPTTQLSMNLALAFPLWLATLLTGLRNQPSASLGHLLPEGTPTPLIPALILIETTSLLIRPLALG 158
Cdd:MTH00172 81 FIVFLNLLGLFPYVFTPTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAISLG 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 992330624 159 VRLTANLTAGHLLIQLISTATTALFSTMPMVSLLTLLVLFLLTILEVAVAMIQAYVFVLLLSLYLQENI 227
Cdd:MTH00172 161 VRLAANLSAGHLLFAILAGFGFNMLCASGFLSLFPLLIMVFITLLEIAVAVIQAYVFCLLTTIYLADTI 229
|
|
| ATP6 |
MTH00175 |
ATP synthase F0 subunit 6; Provisional |
1-227 |
6.31e-24 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177228 Cd Length: 244 Bit Score: 95.46 E-value: 6.31e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992330624 1 MNLSFFDQFSSPSLLGIPLI----LISMTFPALLLPSL---------DNRWITNRLSTLQLWFINLVTKQLMMPLDKKGH 67
Cdd:MTH00175 1 MLAAYFDQFNIIRLITIQAFlgdwLVTFTNSSMMMVLAviifwlllkGDKLIPNRWQSIMELIYLNIRSVVHDNLGKSGQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992330624 68 KWALILTSLMIFLLLINLLGLLPYTFTPTTQLSMNLALAFPLWLATLLTGLRNQPSASLGHLLPEGTPTPLIPALILIET 147
Cdd:MTH00175 81 KYFPFILSLFLFIAILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIET 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992330624 148 TSLLIRPLALGVRLTANLTAGHLLIQLIST-ATTALFSTMPMVSLLTLLVLFLLTILEVAVAMIQAYVFVLLLSLYLQEN 226
Cdd:MTH00175 161 LSYLIRAISLGVRLAANISAGHLLFAILSGfAFNMLSNGLIILSLFPMLIMIFITLLEMAVAVIQAYVFCLLTTIYLGDT 240
|
.
gi 992330624 227 I 227
Cdd:MTH00175 241 I 241
|
|
| ATP6 |
MTH00174 |
ATP synthase F0 subunit 6; Provisional |
90-227 |
2.39e-17 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 133799 Cd Length: 252 Bit Score: 78.06 E-value: 2.39e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992330624 90 PYTFTPTTQLSMNLALAFPLWLATLLTGLRNQPSASLGHLLPEGTPTPLIPALILIETTSLLIRPLALGVRLTANLTAGH 169
Cdd:MTH00174 111 PYVFTPTVHMVITLGLSFAIIVGTTLAGLITFRFNFFSILMPQGAPLALAPLLTIIETLSYISRAISLGVRLAANISSGH 190
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 992330624 170 LLIQLISTATTALFSTMPMV-SLLTLLVLFLLTILEVAVAMIQAYVFVLLLSLYLQENI 227
Cdd:MTH00174 191 LLFSIIASFAWKMINTGILIgSFVPFAILIFVTILEMAVAIIQAYVFTLLTIVYLRDTV 249
|
|
| AtpB |
COG0356 |
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ... |
90-225 |
3.11e-16 |
|
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase
Pssm-ID: 440125 [Multi-domain] Cd Length: 212 Bit Score: 74.34 E-value: 3.11e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992330624 90 PYTFTPTTQLSMNLALAFPLWLATLLTGLRNQ-PSASLGHLLPEGTPtPLIPALILIETTSLLIRPLALGVRLTANLTAG 168
Cdd:COG0356 78 PGLFPPTADINVTLALALIVFVLVHYYGIKKKgLGGYLKHLFFPPFP-WLAPLMLPIEIISELARPLSLSLRLFGNMFAG 156
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 992330624 169 HLLIQLIstattALFSTMPMVSLLTLLVLFLLTILEVAVAMIQAYVFVLLLSLYLQE 225
Cdd:COG0356 157 HIILLLL-----AGLAPFLLLGVLSLLLPVAWTAFELLVGFLQAYIFTMLTAVYISL 208
|
|
| PRK05815 |
PRK05815 |
F0F1 ATP synthase subunit A; Validated |
91-225 |
3.34e-15 |
|
F0F1 ATP synthase subunit A; Validated
Pssm-ID: 235617 Cd Length: 227 Bit Score: 71.75 E-value: 3.34e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992330624 91 YTFTPTTQLSMNLALAFPLWLATLLTGLRNQpsaSLGHLLPEGTPTPlIPALILIETTSLLIRPLALGVRLTANLTAGHL 170
Cdd:PRK05815 95 LLFPPTADINVTLALALIVFVLVIYYGIKKK---GLGGYLKEFYLQP-HPLLLPIEIISEFSRPISLSLRLFGNMLAGEL 170
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 992330624 171 LIQLIStattALFSTMPMVSLLTLLVLFLLTILEVAVAMIQAYVFVLLLSLYLQE 225
Cdd:PRK05815 171 ILALIA----LLGGAGLLLALAPLILPVAWTIFEIFVGTLQAYIFMMLTIVYISM 221
|
|
| ATP6 |
MTH00087 |
ATP synthase F0 subunit 6; Provisional |
90-225 |
9.03e-11 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177152 Cd Length: 195 Bit Score: 58.84 E-value: 9.03e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992330624 90 PYTFTPTTQLSMNLALAFPLWLATLLTGLRNqpSASLGHLLPEGTPTPLIP-ALILIETTSLLIRPLALGVRLTANLTAG 168
Cdd:MTH00087 72 PYSFSPCGMVEFTFLYALVAWLSTFLSFLSK--SEKFSVYLSKGSDSFLKTfSMLFVEIVSELSRPLALTLRLTVNLMVG 149
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 992330624 169 HLLIQLISTattalfstmpmVSLLTLLVLFLLTILEVAVAMIQAYVFVLLLSLYLQE 225
Cdd:MTH00087 150 HLISSLLNF-----------LGEKYVWLSILAIMMECFVAFIQSYIFSRLIYLYLNE 195
|
|
| PRK13419 |
PRK13419 |
F0F1 ATP synthase subunit A; Provisional |
90-223 |
9.74e-09 |
|
F0F1 ATP synthase subunit A; Provisional
Pssm-ID: 237381 Cd Length: 342 Bit Score: 54.36 E-value: 9.74e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992330624 90 PYTFTPTTQLSMNLALAFPLWLATLLTGLRNQP-SASLGHLlPEGTPTPLIPALILIETTSLLIRPLALGVRLTANLTAG 168
Cdd:PRK13419 191 PYGATATGNINVTLTLAVFTFFITQYAAIKAHGiKGYLAHL-TGGTHWSLWIIMIPIEFIGLFTKPFALTVRLFANMTAG 269
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 992330624 169 HLLI-QLI------STATTALFSTMPMvslltllvLFLLTILEVAVAMIQAYVFVLLLSLYL 223
Cdd:PRK13419 270 HIVIlSLIfisfilKSYIVAVAVSVPF--------AIFIYLLELFVAFLQAYIFTMLSALFI 323
|
|
| PRK13417 |
PRK13417 |
F0F1 ATP synthase subunit A; Provisional |
94-223 |
2.97e-08 |
|
F0F1 ATP synthase subunit A; Provisional
Pssm-ID: 237380 Cd Length: 352 Bit Score: 52.97 E-value: 2.97e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992330624 94 TPTTQLSMNLALAFPLWLATLLTGLRNQPSASLGHLLPEGTPTPLIPALILIE-TTSLLIRPLALGVRLTANLTAGHLLI 172
Cdd:PRK13417 217 TVTGDISVTMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEfIVSPMAKTFALTVRLLANMTAGHVII 296
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 992330624 173 qlISTATTALFSTMPMVSLLTLLVLFLLTILEVAVAMIQAYVFVLLLSLYL 223
Cdd:PRK13417 297 --LALMGFIFQFQSWGIVPVSVIGSGLIYVLEIFVAFLQAYIFVLLTSLFV 345
|
|
| ATP6 |
MTH00050 |
ATP synthase F0 subunit 6; Validated |
90-168 |
6.87e-03 |
|
ATP synthase F0 subunit 6; Validated
Pssm-ID: 177125 Cd Length: 170 Bit Score: 36.02 E-value: 6.87e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 992330624 90 PYTFTPTTQLSMNLALAFPLWLATLLTGLRNQPSASLGHLLPEGTPTPLIPALILIETTSLLIRPLALGVRLTANLTAG 168
Cdd:MTH00050 43 PYIYSPFLFVVFLFVVVFPLFISLFLSRVFDSLNEFFSSFVPVGTPLYICPFVCIAETISYIIRPVVLILRPFINISLG 121
|
|
|