|
Name |
Accession |
Description |
Interval |
E-value |
| ND3 |
MTH00136 |
NADH dehydrogenase subunit 3; Provisional |
1-116 |
8.90e-63 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177194 [Multi-domain] Cd Length: 116 Bit Score: 186.66 E-value: 8.90e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 372291188 1 MNSLTFMLSLSFLLSTALTTLNFWLAQMTPDTEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAI 80
Cdd:MTH00136 1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80
|
90 100 110
....*....|....*....|....*....|....*.
gi 372291188 81 QLQSPTTTLTWTAIIITLLTLGLIYEWMQGGLEWAE 116
Cdd:MTH00136 81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
|
|
| ND3 |
MTH00113 |
NADH dehydrogenase subunit 3; Provisional |
2-115 |
4.51e-59 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177175 [Multi-domain] Cd Length: 114 Bit Score: 177.00 E-value: 4.51e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 372291188 2 NSLTFMLSLSFLLSTALTTLNFWLAQMTPDTEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIQ 81
Cdd:MTH00113 1 MNLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80
|
90 100 110
....*....|....*....|....*....|....
gi 372291188 82 LQSPTTTLTWTAIIITLLTLGLIYEWMQGGLEWA 115
Cdd:MTH00113 81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
|
|
| ND3 |
MTH00069 |
NADH dehydrogenase subunit 3; Provisional |
4-116 |
1.07e-57 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177141 [Multi-domain] Cd Length: 114 Bit Score: 173.64 E-value: 1.07e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 372291188 4 LTFMLSLSFLLSTALTTLNFWLAQMTPDTEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIQLQ 83
Cdd:MTH00069 2 IMLMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQLN 81
|
90 100 110
....*....|....*....|....*....|...
gi 372291188 84 SPTTTLTWTAIIITLLTLGLIYEWMQGGLEWAE 116
Cdd:MTH00069 82 TPTNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
|
|
| ND3 |
MTH00106 |
NADH dehydrogenase subunit 3; Provisional |
1-116 |
1.30e-47 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177168 [Multi-domain] Cd Length: 115 Bit Score: 148.16 E-value: 1.30e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 372291188 1 MNsLTFMLSLSFLLSTALTTLNFWLAQMTPDTEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAI 80
Cdd:MTH00106 1 MN-LMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAS 79
|
90 100 110
....*....|....*....|....*....|....*.
gi 372291188 81 QLQSPTTTLTWTAIIITLLTLGLIYEWMQGGLEWAE 116
Cdd:MTH00106 80 QTNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
|
|
| ND3 |
MTH00042 |
NADH dehydrogenase subunit 3; Validated |
1-116 |
1.26e-41 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 177117 [Multi-domain] Cd Length: 116 Bit Score: 133.18 E-value: 1.26e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 372291188 1 MNSLTFMLSLSFLLSTALTTLNFWLAQMTPDTEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAI 80
Cdd:MTH00042 1 MTNLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPAT 80
|
90 100 110
....*....|....*....|....*....|....*.
gi 372291188 81 QLQSPTTTLTWTAIIITLLTLGLIYEWMQGGLEWAE 116
Cdd:MTH00042 81 LITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
|
|
| ND3 |
MTH00203 |
NADH dehydrogenase subunit 3; Provisional |
1-114 |
7.25e-40 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214456 [Multi-domain] Cd Length: 112 Bit Score: 128.48 E-value: 7.25e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 372291188 1 MNSLTFMLSLSFLLSTALTTLNFWLAQMTPDTEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAI 80
Cdd:MTH00203 1 MNLIMLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSN 80
|
90 100 110
....*....|....*....|....*....|....
gi 372291188 81 QLQSPttTLTWTAIIITLLTLGLIYEWMQGGLEW 114
Cdd:MTH00203 81 QLSSL--SLLLAFLFLILLTLGLIYEWLQGGLEW 112
|
|
| Oxidored_q4 |
pfam00507 |
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; |
20-113 |
7.92e-35 |
|
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
Pssm-ID: 459838 [Multi-domain] Cd Length: 94 Bit Score: 115.21 E-value: 7.92e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 372291188 20 TLNFWLAQMTPDTEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWAIQLQSPTTTLTWTAII-ITL 98
Cdd:pfam00507 2 LLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRELGWFGFVEMLIfIAI 79
|
90
....*....|....*
gi 372291188 99 LTLGLIYEWMQGGLE 113
Cdd:pfam00507 80 LLVGLVYAWKKGALE 94
|
|
| ND3 |
MTH00148 |
NADH dehydrogenase subunit 3; Provisional |
1-116 |
2.12e-33 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214433 [Multi-domain] Cd Length: 117 Bit Score: 112.26 E-value: 2.12e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 372291188 1 MNSLTFMLSLSFLLSTALTTLNFWLAQMTP-DTEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWA 79
Cdd:MTH00148 1 MLSILLSLLFALILSPVLLLLGLVLSKRSYsDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80
|
90 100 110
....*....|....*....|....*....|....*..
gi 372291188 80 IQLQSPTTTLTWTAIIITLLTLGLIYEWMQGGLEWAE 116
Cdd:MTH00148 81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
|
|
| ND3 |
MTH00055 |
NADH dehydrogenase subunit 3; Provisional |
6-114 |
6.25e-31 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177128 [Multi-domain] Cd Length: 118 Bit Score: 105.95 E-value: 6.25e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 372291188 6 FMLSLSFLLSTALTTLNFWLAQMTPDTEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWAIQLQSP 85
Cdd:MTH00055 10 ILLLFSIGLSTVISGASYIVGVKQPDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFL--FPWCVVYNQI 87
|
90 100 110
....*....|....*....|....*....|
gi 372291188 86 TTTLTWTAII-ITLLTLGLIYEWMQGGLEW 114
Cdd:MTH00055 88 GLFGFWVMYLfLIILTIGLIYEWVKGGLEW 117
|
|
| ND3 |
MTH00161 |
NADH dehydrogenase subunit 3; Provisional |
4-114 |
1.93e-30 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177217 [Multi-domain] Cd Length: 113 Bit Score: 104.47 E-value: 1.93e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 372291188 4 LTFMLSLSFLLSTALTTLNFWLAQMTP-DTEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIQL 82
Cdd:MTH00161 2 ILIILLIILLISIILMILASLLSKKSImDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKT 81
|
90 100 110
....*....|....*....|....*....|..
gi 372291188 83 QSPTTTLTWTAIIITLLTLGLIYEWMQGGLEW 114
Cdd:MTH00161 82 SNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
|
|
| NuoA |
COG0838 |
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ... |
4-114 |
2.02e-29 |
|
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440600 [Multi-domain] Cd Length: 117 Bit Score: 102.12 E-value: 2.02e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 372291188 4 LTFMLSLSFLLSTALTTLNFWLAQMTPDTEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWAIQLQ 83
Cdd:COG0838 8 ILIFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFR 85
|
90 100 110
....*....|....*....|....*....|..
gi 372291188 84 S-PTTTLTWTAIIITLLTLGLIYEWMQGGLEW 114
Cdd:COG0838 86 ElGWFGLIEMLVFIAILLVGLIYAWKKGALEW 117
|
|
| PRK06602 |
PRK06602 |
NADH:ubiquinone oxidoreductase subunit A; Validated |
8-115 |
7.99e-29 |
|
NADH:ubiquinone oxidoreductase subunit A; Validated
Pssm-ID: 180638 [Multi-domain] Cd Length: 121 Bit Score: 100.71 E-value: 7.99e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 372291188 8 LSLSFLLSTALTTLNFWLAQMTPDTEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWAIQLQSPTT 87
Cdd:PRK06602 15 LIVAIGLGILLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFL--FPWAVSFREIGW 92
|
90 100
....*....|....*....|....*....
gi 372291188 88 TLTWTAII-ITLLTLGLIYEWMQGGLEWA 115
Cdd:PRK06602 93 LGFVEAMIfILVLLVGLVYLWRKGALDWE 121
|
|
| ND3 |
MTH00018 |
NADH dehydrogenase subunit 3; Validated |
3-114 |
1.39e-28 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 164592 [Multi-domain] Cd Length: 113 Bit Score: 100.14 E-value: 1.39e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 372291188 3 SLTFMLSLSFLLSTALTTLNFWLAQMTPDTEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWAIQL 82
Cdd:MTH00018 2 GLFILLIFSVVLSALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFL--FPWCVLY 79
|
90 100 110
....*....|....*....|....*....|...
gi 372291188 83 QSPTTTLTWTAII-ITLLTLGLIYEWMQGGLEW 114
Cdd:MTH00018 80 NQIAPFGFWTMVGfLFILTLGLIYEWIKGGLEW 112
|
|
| ND3 |
MTH00202 |
NADH dehydrogenase subunit 3; Provisional |
1-116 |
2.60e-26 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214455 [Multi-domain] Cd Length: 117 Bit Score: 94.29 E-value: 2.60e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 372291188 1 MNSLTFMLSLSFLLSTALTTLNFWL-AQMTPDTEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWA 79
Cdd:MTH00202 1 MLLILFMSILSILISSLLFLVSWMLsFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80
|
90 100 110
....*....|....*....|....*....|....*..
gi 372291188 80 IQLQSPTTTLTWTAIIITLLTLGLIYEWMQGGLEWAE 116
Cdd:MTH00202 81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWVK 117
|
|
| ND3 |
MTH00012 |
NADH dehydrogenase subunit 3; Validated |
1-115 |
4.99e-25 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 164588 [Multi-domain] Cd Length: 117 Bit Score: 91.07 E-value: 4.99e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 372291188 1 MNSLTFMLSLSFLLSTALTTLNFWLA-QMTPDTEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWA 79
Cdd:MTH00012 1 MSLMMIPMMISLILPPLVLGAAWVLAaRSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80
|
90 100 110
....*....|....*....|....*....|....*.
gi 372291188 80 IQLQSPTTTLTWTAIIITLLTLGLIYEWMQGGLEWA 115
Cdd:MTH00012 81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
|
|
| ND3 |
MTH00030 |
NADH dehydrogenase subunit 3; Provisional |
12-114 |
4.14e-20 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 164603 [Multi-domain] Cd Length: 123 Bit Score: 78.82 E-value: 4.14e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 372291188 12 FLLSTALTTLNFWLAQMTPDTEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWAIQLQSPTTTLTW 91
Cdd:MTH00030 21 LLVSISFTLGNSRIGLTKPDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFL--FPWSIVFNQLNLFSFW 98
|
90 100
....*....|....*....|....
gi 372291188 92 TA-IIITLLTLGLIYEWMQGGLEW 114
Cdd:MTH00030 99 IVyTFLIVLAIGLAYEWIKGGLEW 122
|
|
| ndhC |
CHL00022 |
NADH dehydrogenase subunit 3 |
10-114 |
1.55e-13 |
|
NADH dehydrogenase subunit 3
Pssm-ID: 176964 [Multi-domain] Cd Length: 120 Bit Score: 61.93 E-value: 1.55e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 372291188 10 LSFLLSTALTTLNFW----LAQMTPDTEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWAIQLQSP 85
Cdd:CHL00022 12 AFLIISSLIPILAFLisglLAPISKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVL 89
|
90 100 110
....*....|....*....|....*....|
gi 372291188 86 TTTLTWTAII-ITLLTLGLIYEWMQGGLEW 114
Cdd:CHL00022 90 GVSAFIEALIfVLILIVGLVYAWRKGALEW 119
|
|
| PRK07756 |
PRK07756 |
NADH-quinone oxidoreductase subunit A; |
8-114 |
2.51e-13 |
|
NADH-quinone oxidoreductase subunit A;
Pssm-ID: 169084 [Multi-domain] Cd Length: 122 Bit Score: 61.30 E-value: 2.51e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 372291188 8 LSLSFLLSTALTTLNFWLAQMTPDTEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPlpWAIQL-QSPT 86
Cdd:PRK07756 16 LLLGILLPVVALTLGRMLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYP--WAVAYdKLGL 93
|
90 100
....*....|....*....|....*...
gi 372291188 87 TTLTWTAIIITLLTLGLIYEWMQGGLEW 114
Cdd:PRK07756 94 FALIEMLIFVVMLLVGLAYAWKKKVLQW 121
|
|
| PRK07928 |
PRK07928 |
NADH dehydrogenase subunit A; Validated |
34-114 |
4.70e-13 |
|
NADH dehydrogenase subunit A; Validated
Pssm-ID: 181171 [Multi-domain] Cd Length: 119 Bit Score: 60.46 E-value: 4.70e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 372291188 34 KLSPYECGFDPLGSARLP--FSIRFFLVAILFLLFDLEIALLLPlpWAIQLQS-PTTTLTWTAIIITLLTLGLIYEWMQG 110
Cdd:PRK07928 37 KLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP--WAVSFDAlGVFGLVEMALFMLTVFVAYAYVWRRG 114
|
....
gi 372291188 111 GLEW 114
Cdd:PRK07928 115 GLEW 118
|
|
| PRK08489 |
PRK08489 |
NAD(P)H-quinone oxidoreductase subunit 3; |
6-114 |
3.53e-11 |
|
NAD(P)H-quinone oxidoreductase subunit 3;
Pssm-ID: 181448 [Multi-domain] Cd Length: 129 Bit Score: 55.83 E-value: 3.53e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 372291188 6 FMLSLSFLLSTALTTLNFW----LAQMTPDTEKLSPYECGFDPLGSARlPFSIRFFLVAILFLLFDLEIALLlpLPWAIQ 81
Cdd:PRK08489 15 VLLVLTFVAFFLTTRLARFisrkLAQKNTEKLKLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFM--FPWAVD 91
|
90 100 110
....*....|....*....|....*....|....*...
gi 372291188 82 LQspttTLTWTAII-----ITLLTLGLIYEWMQGGLEW 114
Cdd:PRK08489 92 FK----LLGLFGLIemllfIVLLTIGFIYAWKKGALEW 125
|
|
| ND3 |
MTH00092 |
NADH dehydrogenase subunit 3; Provisional |
1-114 |
1.82e-09 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177155 Cd Length: 111 Bit Score: 51.05 E-value: 1.82e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 372291188 1 MNSLTFMLSLSFLLSTALTTLNFWLAQMTPDTEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLpwai 80
Cdd:MTH00092 1 MLVLIFVFLFTLLLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGL---- 76
|
90 100 110
....*....|....*....|....*....|....
gi 372291188 81 qLQSPTTTLTWTAIIITLLTLGLIYEWMQGGLEW 114
Cdd:MTH00092 77 -LVSDFSSLISFFMLMIFIFFGFYMEWWYGKLIW 109
|
|
| ND3 |
MTH00060 |
NADH dehydrogenase subunit 3; Provisional |
36-114 |
9.59e-06 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177132 Cd Length: 116 Bit Score: 41.42 E-value: 9.59e-06
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 372291188 36 SPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIQLQSpttTLTWTAIIITLLTLGLIYEWMQGGLEW 114
Cdd:MTH00060 39 SSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMPFQGLLFY---NFWYYYFFLLLLFLGFVVELFSGYVRW 114
|
|
|