|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-459 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 657.03 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 1 MLTIILPTMMLIPTAWLVPAKWLWPSTLLHSFLIALASFQLFKNASETGWSELGPYMATDPISAPLLVLSCWLLPIMISA 80
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 81 SQSHTEKEPISRQRAYISLLTSLQLFLILAFGATEMIMFYVMFEATLIPTLILITRWGNQTERLSAGTYFLFYTLAGSLP 160
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 161 LLIALLLLQNTKGSLSLLTLAYSEPLLLTTYASKIWWTACILAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 241 GYGMMRILVTMEPLTKEMVYPFIVLALWGIIMTSSICLRQTDLKSLIAYSSVSHMGLVVSGILIQTPWGSTGALILMIAH 320
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 321 GLTSSALFCLANTNYERTHSRTMLLTRGLQMALPLMAAWWFIASLANLALPPLPNLMGELMILTSLFNWSWWTIILTGLG 400
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 327492677 401 TLITASYSLYMFLMTQRGPLPTHILALEPSHTREHLLITLHLFPLLLLILKPELIWGWA 459
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWGWT 459
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-439 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 648.41 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 1 MLTIILPTMMLIPTAWLVPAKWLWPSTLLHSFLIALASFQLFKNASETGwSELGPYMATDPISAPLLVLSCWLLPIMISA 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPT-KNLTQWLGIDQISAPLLVLSCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 81 SQSHTEKEPISRQRAYISLLTSLQLFLILAFGATEMIMFYVMFEATLIPTLILITRWGNQTERLSAGTYFLFYTLAGSLP 160
Cdd:MTH00124 80 SQNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 161 LLIALLLLQNTKGSLSLLTLAYSEPLLLTTYASKIWWTACILAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00124 160 LLIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 241 GYGMMRILVTMEPLTKEMVYPFIVLALWGIIMTSSICLRQTDLKSLIAYSSVSHMGLVVSGILIQTPWGSTGALILMIAH 320
Cdd:MTH00124 240 GYGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 321 GLTSSALFCLANTNYERTHSRTMLLTRGLQMALPLMAAWWFIASLANLALPPLPNLMGELMILTSLFNWSWWTIILTGLG 400
Cdd:MTH00124 320 GLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLA 399
|
410 420 430
....*....|....*....|....*....|....*....
gi 327492677 401 TLITASYSLYMFLMTQRGPLPTHILALEPSHTREHLLIT 439
Cdd:MTH00124 400 TLITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMT 438
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-458 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 640.04 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 1 MLTIILPTMMLIPTAWLVPAKWLWPSTLLHSFLIALASFQLFKNASETgWSELGPYMATDPISAPLLVLSCWLLPIMISA 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSET-MNFTNKYFGIDQISSPLLILTCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 81 SQSHTEKEPISRQRAYISLLTSLQLFLILAFGATEMIMFYVMFEATLIPTLILITRWGNQTERLSAGTYFLFYTLAGSLP 160
Cdd:MTH00068 80 SQNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 161 LLIALLLLQNTKGSLSLLTLAYSEPLLLTTYASKIWWTACILAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00068 160 LLIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 241 GYGMMRILVTMEPLTKEMVYPFIVLALWGIIMTSSICLRQTDLKSLIAYSSVSHMGLVVSGILIQTPWGSTGALILMIAH 320
Cdd:MTH00068 240 GYGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 321 GLTSSALFCLANTNYERTHSRTMLLTRGLQMALPLMAAWWFIASLANLALPPLPNLMGELMILTSLFNWSWWTIILTGLG 400
Cdd:MTH00068 320 GLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLG 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 327492677 401 TLITASYSLYMFLMTQRGPLPTHILALEPSHTREHLLITLHLFPLLLLILKPELIWGW 458
Cdd:MTH00068 400 TLITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISGM 457
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-439 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 622.30 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 1 MLTIILPTMMLIPTAWLVPAKWLWPSTLLHSFLIALASFQLFKNASETGWSeLGPYMATDPISAPLLVLSCWLLPIMISA 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLN-FSLLFFSDSLSTPLLILTTWLLPLMLMA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 81 SQSHTEKEPISRQRAYISLLTSLQLFLILAFGATEMIMFYVMFEATLIPTLILITRWGNQTERLSAGTYFLFYTLAGSLP 160
Cdd:MTH00110 80 SQHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 161 LLIALLLLQNTKGSLSLLTLAYSEPLLLTTYASKIWWTACILAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00110 160 LLVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 241 GYGMMRILVTMEPLTKEMVYPFIVLALWGIIMTSSICLRQTDLKSLIAYSSVSHMGLVVSGILIQTPWGSTGALILMIAH 320
Cdd:MTH00110 240 GYGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 321 GLTSSALFCLANTNYERTHSRTMLLTRGLQMALPLMAAWWFIASLANLALPPLPNLMGELMILTSLFNWSWWTIILTGLG 400
Cdd:MTH00110 320 GLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLN 399
|
410 420 430
....*....|....*....|....*....|....*....
gi 327492677 401 TLITASYSLYMFLMTQRGPLPTHILALEPSHTREHLLIT 439
Cdd:MTH00110 400 MLITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMA 438
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-439 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 526.43 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 3 TIILPTMMLIPTAWLVPAKWLWPSTLLHSFLIALASFQLFKNASETGWSELGPYMATDPISAPLLVLSCWLLPIMISASQ 82
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 83 SHTEKEPISRQRAYISLLTSLQLFLILAFGATEMIMFYVMFEATLIPTLILITRWGNQTERLSAGTYFLFYTLAGSLPLL 162
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 163 IALLLLQNTKGSLSLLTLAYSeplLLTTYASKIWWTACILAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGY 242
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYFS---KLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 243 GMMRILVTMEPLTKEMVYPFIVLALWGIIMTSSICLRQTDLKSLIAYSSVSHMGLVVSGILIQTPWGSTGALILMIAHGL 322
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 323 TSSALFCLANTNYERTHSRTMLLTRGLQMALPLMAAWWFIASLANLALPPLPNLMGELMILTSLFNWSWWTIILTGLGTL 402
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430
....*....|....*....|....*....|....*..
gi 327492677 403 ITASYSLYMFLMTQRGPLPTHILALEPSHTREHLLIT 439
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLF 434
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-439 |
4.82e-166 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 475.62 E-value: 4.82e-166
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 1 MLTIILPTMMLIPTAWLVPAKWLWPSTLLHSFLIALASFQLFKNASETGWSELGPYMATDPISAPLLVLSCWLLPIMISA 80
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLNNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 81 SQSHTEKEPISRQRAYISLLTSLQLFLILAFGATEMIMFYVMFEATLIPTLILITRWGNQTERLSAGTYFLFYTLAGSLP 160
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 161 LLIALLLLQNTKGSLSLLTLAYSEPLLLTTYASKIWWTACILAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 241 GYGMMR-ILVTMEPLTKEMVYPFIVLALWGIIMTSSICLRQTDLKSLIAYSSVSHMGLVVSGILIQTPWGSTGALILMIA 319
Cdd:MTH00044 241 GYGLIRlINLFSLPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 320 HGLTSSALFCLANTNYERTHSRTMLLTRGLQMALPLMAAWWFIASLANLALPPLPNLMGELMILTSLFNWSWWTIILTGL 399
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 327492677 400 GTLITASYSLYMFLMTQRGPLPTHILALEPSHTREHLLIT 439
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIF 440
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-438 |
3.10e-122 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 363.32 E-value: 3.10e-122
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 1 MLTIILPTMMLIPTAWLVPAKWLwpstlLHSFLIALASFQLFKNASETGWSELGPYMATDPISAPLLVLSCWLLPIMISA 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWWL-----VQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILS 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 81 SQShtEKEPISRQRAYISLLTSLQLFLILAFGATEMIMFYVMFEATLIPTLILITRWGNQTERLSAGTYFLFYTLAGSLP 160
Cdd:MTH00163 76 SES--VYKKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLP 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 161 LLIALLLLQNTKGSLSLLTLAYSEPLllttyaSKIWWTACILAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00163 154 LLVGIFYLYNNSGSLSFFLLNFFGSL------NFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLG 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 241 GYGMMRILVTMEPLTKEMVYPFIVLALWGIIMTSSICLRQTDLKSLIAYSSVSHMGLVVSGILIQTPWGSTGALILMIAH 320
Cdd:MTH00163 228 GYGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGH 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 321 GLTSSALFCLANTNYERTHSRTMLLTRGLQMALPLMAAWWFIASLANLALPPLPNLMGELMILTSLFNWSWWTIILTGLG 400
Cdd:MTH00163 308 GLCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLL 387
|
410 420 430
....*....|....*....|....*....|....*...
gi 327492677 401 TLITASYSLYMFLMTQRGPLPTHILALEPSHTREHLLI 438
Cdd:MTH00163 388 SFFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLL 425
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
49-437 |
1.29e-121 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 361.08 E-value: 1.29e-121
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 49 GWSELGPYMATDPISAPLLVLSCWLLPIMISASQShtEKEPISRQRAYISLLTSLQLFLILAFGATEMIMFYVMFEATLI 128
Cdd:MTH00150 12 SYESLSELFSVDSMSSLLISLSLWISGLMMLASQK--SVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLI 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 129 PTLILITRWGNQTERLSAGTYFLFYTLAGSLPLLIALLLLQNTKGSLSLLTLAYsepLLLTTYASKIWWTACILAFLVKM 208
Cdd:MTH00150 90 PTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISS---LRKLLSSMGLWGLLVFLAFLVKL 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 209 PLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRILVTMEPLTKEMVYPFIVLALWGIIMTSSICLRQTDLKSLIA 288
Cdd:MTH00150 167 PMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIA 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 289 YSSVSHMGLVVSGILIQTPWGSTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLTRGLQMALPLMAAWWFIASLANL 368
Cdd:MTH00150 247 YSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINM 326
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 327492677 369 ALPPLPNLMGELMILTSLFNWSWWTIILTGLGTLITASYSLYMFLMTQRGPLPTHILALEPSHTREHLL 437
Cdd:MTH00150 327 AAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLL 395
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-439 |
2.97e-110 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 333.25 E-value: 2.97e-110
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 1 MLTIILPTMMLIPTAwLVPAKWLWPSTLLHSFLIALASFqLFKNASETGWSELGPYMATDPISAPLLVLSCWLLPIMISA 80
Cdd:MTH00014 1 MLKLIMPLISLLLLP-LIKYPWSWALTFSTLLLLSLFTL-LNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 81 SQS--HTEKEPISrqraYISLLTSLQLFLILAFGATEMIMFYVMFEATLIPTLILITRWGNQTERLSAGTYFLFYTLAGS 158
Cdd:MTH00014 79 SFKifQNNKAPKT----FMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTAS 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 159 LPLLIALLLLQNTKGSLSLLTLAYSEPLLlttYASKIWWTACILAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLK 238
Cdd:MTH00014 155 LPLLMSILLIFYTNNSLSMLMSSMEPPSI---YLMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLK 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 239 LGGYGMMRILVTMEPLTKEMVYPFIVLALWGIIMTSSICLRQTDLKSLIAYSSVSHMGLVVSGILIQTPWGSTGALILMI 318
Cdd:MTH00014 232 LGGYGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMI 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 319 AHGLTSSALFCLANTNYERTHSRTMLLTRGLQMALPLMAAWWFIASLANLALPPLPNLMGELMILTSLFNWSWWTIILTG 398
Cdd:MTH00014 312 AHGLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLA 391
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 327492677 399 LGTLITASYSLYMFLMTQRGPLPTHILALEPSHTREHLLIT 439
Cdd:MTH00014 392 ITSFLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMT 432
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
9-418 |
1.17e-109 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 331.56 E-value: 1.17e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 9 MMLIPTAWLVPAKWLWPSTLLHSFLIALASFQLFKNASETGWSELGPYMATDPISAPLLVLSCWLLPIMISASQSHTEKE 88
Cdd:MTH00205 5 GVFSLLIILFVLKFKDWSFFSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSN 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 89 piSRQRAYISLLTSLQLFLILAFGATEMIMFYVMFEATLIPTLILITRWGNQTERLSAGTYFLFYTLAGSLPLLIALLLL 168
Cdd:MTH00205 85 --KNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 169 QNTKGSLSLLtlaYSEPLLLTTYASKIWWTACILAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIL 248
Cdd:MTH00205 163 NSLNFSLSMF---FNFPLNFSDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRIT 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 249 VTMEPLTKEMVYPFIVLALWGIIMTSSICLRQTDLKSLIAYSSVSHMGLVVSGILIQTPWGSTGALILMIAHGLTSSALF 328
Cdd:MTH00205 240 SMLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMF 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 329 CLANTNYERTHSRTMLLTRGLQMALPLMAAWWFIASLANLALPPLPNLMGELMILTSLFNWSWWTIILTGLGTLITASYS 408
Cdd:MTH00205 320 ALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYS 399
|
410
....*....|
gi 327492677 409 LYMFLMTQRG 418
Cdd:MTH00205 400 LYLYSQSQHG 409
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
2-438 |
1.00e-85 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 271.18 E-value: 1.00e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 2 LTIILP-----TMMLIPTAWLVPAKWLWPSTLLHSFLIALASFQLFkNASETGW--SELGP---------YMATDPISAP 65
Cdd:COG1008 8 LLILLPllgalLLLLLPRRNARLARWVALAVSLLTLLLSLYLLAGF-DPGTGGFqfVESYPwipslgisyHLGVDGISLP 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 66 LLVLSCWLLPIMISASQSHTEKepisRQRAYISLLTSLQLFLILAFGATEMIMFYVMFEATLIPTLILITRWGNQtERLS 145
Cdd:COG1008 87 LVLLTALLTPLAILASWNEIKK----RPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGGE-RRIY 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 146 AGTYFLFYTLAGSLPLLI--ALLLLQNTKGSLSLLTLAYsepLLLTTYASKIWWTACILAFLVKMPLYGVHLWLPKAHVE 223
Cdd:COG1008 162 AAIKFFLYTLAGSLLMLVaiLALYFLAGALTFDIAELAA---APLPLTAQLLLFLAFFIAFAVKVPMFPFHTWLPDAHVE 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 224 APIAGSMVLAAVLLKLGGYGMMRILVTMEPL-TKEMVYPFIVLALWGIIMTSSICLRQTDLKSLIAYSSVSHMGLVVSGI 302
Cdd:COG1008 239 APTAGSVLLAGVLLKMGGYGLLRFALPLFPEaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLLGI 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 303 LIQTPWGSTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLTRGLQMALPLMAAWWFIASLANLALPPLPNLMGELMI 382
Cdd:COG1008 319 FALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLV 398
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 327492677 383 LTSLFNWSWWTIILTGLGTLITASYSLYMFLMTQRGPLPTHILALEPSHTREHLLI 438
Cdd:COG1008 399 LLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRELAVL 454
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
28-438 |
4.15e-80 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 256.67 E-value: 4.15e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 28 LLHSFLIALASFQLFKNASETGWSELGPYMATDPISAPLLVLSCWLLPIMISASQSHTEKepisRQRAYISLLTSLQLFL 107
Cdd:PRK05846 49 LWIGFDSSNAGFQFVEKHPWIPRFGISYHLGVDGISLLLVVLTALLTPLAVLASWEEIKK----RVKFYMAALLWLEGGV 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 108 ILAFGATEMIMFYVMFEATLIPTLILITRWGnQTERLSAGTYFLFYTLAGSLPL----LIALLLLQNTKGSLSLLTLAYS 183
Cdd:PRK05846 125 IGVFAALDLLLFYVFFEAMLIPMYFLIGVWG-GKNRIYAATKFFLYTLLGSLLMlvaiIYLVVVYYNATGTFDIADLLNL 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 184 EpllLTTYASKIWWTACILAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRILVTMEPL-TKEMVYPF 262
Cdd:PRK05846 204 P---LPPGVQYWLFLAFFIAFAVKMPMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDaSHEFAPII 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 263 IVLALWGIIMTSSICLRQTDLKSLIAYSSVSHMGLVVSGILIQTPWGSTGALILMIAHGLTSSALFCLANTNYERTHSRT 342
Cdd:PRK05846 281 ITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRD 360
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 343 MLLTRGLQMALPLMAAWWFIASLANLALPPLPNLMGELMILTSLFNWSWWTIILTGLGTLITASYSLYMFLMTQRGPLPT 422
Cdd:PRK05846 361 IADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKN 440
|
410
....*....|....*.
gi 327492677 423 HILALEPSHTREHLLI 438
Cdd:PRK05846 441 EVAKLKDLNGRELLIL 456
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
57-426 |
1.65e-75 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 244.46 E-value: 1.65e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 57 MATDPISAPLLVLSCWLLPIMISASQSHTEKepisRQRAYISLLTSLQLFLILAFGATEMIMFYVMFEATLIPTLILITR 136
Cdd:TIGR01972 73 LGVDGISLLLVLLTALLTLLAILASWESIQK----RVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGV 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 137 WGNQTeRLSAGTYFLFYTLAGSLPLLIALLLLQ-NTKGSLSLLTLAysePLLLTTYASKIWWTACILAFLVKMPLYGVHL 215
Cdd:TIGR01972 149 WGGPN-RIYAAMKFFLYTLAGSLLMLLAILGLYfLGGGTFDLLELL---NLPLPFGVQTWLFLAFFIAFAVKVPLFPLHT 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 216 WLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRILVTMEP-LTKEMVYPFIVLALWGIIMTSSICLRQTDLKSLIAYSSVSH 294
Cdd:TIGR01972 225 WLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPdASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISH 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 295 MGLVVSGILIQTPWGSTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLTRGLQMALPLMAAWWFIASLANLALPPLP 374
Cdd:TIGR01972 305 MGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTS 384
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 327492677 375 NLMGELMILTSLFNWSWWTIILTGLGTLITASYSLYMFLMTQRGPLPTHILA 426
Cdd:TIGR01972 385 GFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNPEVA 436
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
24-412 |
5.68e-70 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 229.95 E-value: 5.68e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 24 WPSTLLHSFLIALASFQL---FKNASETGW-------SELGP-YMATDPISAPLLVLSCWLLPIMISASQS---HTEKEp 89
Cdd:MTH00204 35 WSLAILFSTLVLWGAFDGegqFQFINLIEWiisptlnFQWGPlVFAVDGVSLFFILLTTLLIPICILISWKsikFLFKE- 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 90 isrqraYISLLTSLQLFLILAFGATEMIMFYVMFEATLIPTLILITRWGNQTERLSAGTYFLFYTLAGSLPLLIALLLLQ 169
Cdd:MTH00204 114 ------FLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLY 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 170 NTKGSLSLLTLAYSEpllLTTYASKIWWTACILAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRILV 249
Cdd:MTH00204 188 SITGTTDYQILLNIK---LPLSIQKWLLVGFFLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSW 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 250 TMEPLTKEMVYPFIV-LALWGIIMTSSICLRQTDLKSLIAYSSVSHMGLVVSGILIQTPWGSTGALILMIAHGLTSSALF 328
Cdd:MTH00204 265 PLFPAASEYFAPLIVmLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALF 344
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 329 CLANTNYERTHSRTMLLTRGLQMALPLMAAWWFIASLANLALPPLPNLMGELMILTSLFNWSWWTIILTGLGTLITASYS 408
Cdd:MTH00204 345 IAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYS 424
|
....
gi 327492677 409 LYMF 412
Cdd:MTH00204 425 LYLY 428
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
113-401 |
1.64e-67 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 217.57 E-value: 1.64e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 113 ATEMIMFYVMFEATLIPTLILITRWGNQTERLSAGTYFLFYTLAGSLPLLIALLLLQNTKGSLSLLTLAYSEPLLLTTYA 192
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 193 SKIWWTACILAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRILVTMEPLTKEMVYPFIVLALWGIIM 272
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 273 TSSICLRQTDLKSLIAYSSVSHMGLVVSGILIQTPWGSTGALILMIAHGLTSSALFCLA-NTNYERTHSRTMLLTRGLQM 351
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 327492677 352 ALPLMAAWWFIASLANLALPPLPNLMGELMILTSLFNWSWWTIILTGLGT 401
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
58-412 |
1.91e-65 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 218.00 E-value: 1.91e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 58 ATDPISAPLLVLSCWLLPIMISASQSHTE---KEpisrqraYISLLTSLQLFLILAFGATEMIMFYVMFEATLIPTLILI 134
Cdd:MTH00217 77 AVDGISIFFLILTALLTPICILISWNSIKfliKE-------FLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLII 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 135 TRWGNQTERLSAGTYFLFYTLAGSLPLLIALLLLQNTKGSLSLLTLAysePLLLTTYASKIWWTACILAFLVKMPLYGVH 214
Cdd:MTH00217 150 GIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALC---CLKIEKELQYFIFLGFFLSLAIKIPKIPFH 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 215 LWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRILVTMEPLTKEMVYPFI-VLALWGIIMTSSICLRQTDLKSLIAYSSVS 293
Cdd:MTH00217 227 IWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIqTLSLLAIIYGSLTTCRQVDLKRIIAYSSVA 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 294 HMGLVVSGILIQTPWGSTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLTRGLQMALPLMAAWWFIASLANLALPPL 373
Cdd:MTH00217 307 HMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLS 386
|
330 340 350
....*....|....*....|....*....|....*....
gi 327492677 374 PNLMGELMILTSLFNWSWWTIILTGLGTLITASYSLYMF 412
Cdd:MTH00217 387 CNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLY 425
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
58-410 |
2.31e-60 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 205.16 E-value: 2.31e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 58 ATDPISAPLLVLSCWLLPIMISASQSHTEkepiSRQRAYISLLTSLQLFLILAFGATEMIMFYVMFEATLIPTLILITRW 137
Cdd:MTH00226 99 AVDGISIYFIILTGFIVPCSILISWHSVK----YLTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIW 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 138 GNQTERLSAGTYFLFYTLAGSLPLLIALLLLQNTKGSLSLLTLAySEPLLLTTYASKIWWTACILAFLVKMPLYGVHLWL 217
Cdd:MTH00226 175 GSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLA-SCSHVVSEQTQKWIFLGIFLAMAVKIPIFPFHIWL 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 218 PKAHVEAPIAGSMVLAAVLLKLGGYGMMRILVTMEPLTKEMVYPFIV-LALWGIIMTSSICLRQTDLKSLIAYSSVSHMG 296
Cdd:MTH00226 254 PKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQNLAPAVIaMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMG 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 297 LVVSGILIQTPWGSTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLTRGLQMALPLMAAWWFIASLANLALPPLPNL 376
Cdd:MTH00226 334 LVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNF 413
|
330 340 350
....*....|....*....|....*....|....
gi 327492677 377 MGELMILTSLFNWSWWTIILTGLGTLITASYSLY 410
Cdd:MTH00226 414 IGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFY 447
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
57-411 |
2.03e-50 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 178.69 E-value: 2.03e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 57 MATDPISAPLLVLSCWLLPIMISASQSHTEKEpisrqRAYISLLTSLQLFLILAFGATEMIMFYVMFEATLIPTLILITR 136
Cdd:PRK12561 55 LGVDGLSMPLVLLSGLITTLSIFASWKVTRKP-----RLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISI 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 137 WGNQtERLSAGTYFLFYTLAGSLPLLIALLLLQNTKGSLSL----LTL-AYSEPLLLTTYAskiwwtACILAFLVKMPLY 211
Cdd:PRK12561 130 WGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFdlaeLGAkSYPLALELLLYA------GFLIAFGVKLPIF 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 212 GVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRILVTMEPLTKEMVYP-FIVLALWGIIMTSSICLRQTDLKSLIAYS 290
Cdd:PRK12561 203 PLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFAPaLAILGVVNIIYGALNAFAQDNVKRRLAYS 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 291 SVSHMGLVVSGILIQTPWGSTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLTRGLQMALPLMAAWWFIASLANLAL 370
Cdd:PRK12561 283 SVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLAL 362
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 327492677 371 PPLPNLMGELMIL---------TSLFNWSwwTIILTGLGTLITASYSLYM 411
Cdd:PRK12561 363 PGMSGFVSELTVFlgitssdvySSTFRTI--TILLAAVGLILTPIYLLSM 410
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
99-410 |
4.36e-48 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 170.09 E-value: 4.36e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 99 LLTSLQLFLILAFGATE-MIMFYVMFEATLIPTLILITRWGNQTERLSAGTYFLFYTLAGSLPLLIALLLlqntkgSLSL 177
Cdd:MTH00094 66 ILSNLLILICLLFFVSSnMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLK------NFFF 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 178 LTLAYSepLLLTTYASKIwwtACILAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRILVTMEPLtke 257
Cdd:MTH00094 140 FSLCYF--DFFLSWEMFF---ILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFV--- 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 258 MVYPFIVLALWGIIMTSSICLRQTDLKSLIAYSSVSHMGLVVSGILIQTPWGSTGALILMIAHGLTSSALFCLANTNYER 337
Cdd:MTH00094 212 YNNFWIIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHI 291
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 327492677 338 THSRTMLLTRGLQMALPLMAAWWFIASLANLALPPLPNLMGELMILTSLFNWSWWTIILTGLGTLITASYSLY 410
Cdd:MTH00094 292 SKSRLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLF 364
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
1-416 |
5.71e-47 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 167.63 E-value: 5.71e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 1 MLTIILPtMMLIPTAWLVPA--KWLWPSTLLHSFLIALASFQLFKNASETG--------WSE-LGPYMATDPISAPLLVL 69
Cdd:COG0651 6 ILPVLLP-LLAAALLLLLGRrrRLQRALSLLASLALLALALALLLQVLAGGplvyalggWPApFGIVLVADRLSALFLLL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 70 SCWLLPIMISASQSHTEKEpiSRQRAYISLLTSLQLFLILAFGATEMIMFYVMFEATLIPTLILITRWGNQtERLSAGTY 149
Cdd:COG0651 85 TALVALAVLLYSIGYMRHE--RRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTK-EALRAGLK 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 150 FLFYTLAGSLPLLIALLLLQNTKGSLSLLTLAYSEPLLLTTYASKIWWtACILAFLVKMPLYGVHLWLPKAHVEAPIAGS 229
Cdd:COG0651 162 YLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGLLLAAFA-LLLVGFGIKAALFPLHFWLPDAYPAAPSPVS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 230 MVLAAVLLKLGGYGMMRILVTM--EPLTKEMVYPFIVLALWGIIMTSSICLRQTDLKSLIAYSSVSHMGLVVSGILIQTP 307
Cdd:COG0651 241 ALLSGLLTKVGVYAILRVLTLLfgADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTP 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 308 WGSTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLTRGLQMALPLMAAWWFIASLANLALPPLPNLMGELMILTSLF 387
Cdd:COG0651 321 LGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAAL 400
|
410 420 430
....*....|....*....|....*....|
gi 327492677 388 N-WSWWTIILTGLGTLITASYSLYMFLMTQ 416
Cdd:COG0651 401 EaGAWLLAAVLLLSSLLTLAYFVRIFGRAQ 430
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
97-411 |
1.63e-39 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 149.09 E-value: 1.63e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 97 ISLLTSLQLFLILA--------FGATEMIMFYVMFEATLIPTLILITRWGNQtERLSAGTYFLFYTLAGSLPLLiallll 168
Cdd:PRK02546 110 VTFKPKLFYFLMLAmyggqiavFAVQDMLLFFLAWELELIPVYLLLAIWGGK-KRQYAATKFILYTAGSSLFIL------ 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 169 qntkgsLSLLTLAYSEPLL---LTTYASK--------IWWTACILAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLL 237
Cdd:PRK02546 183 ------LAALAMAFYGDTPtfdMTALAAKdfglgfqlLCYAGLLIAYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILL 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 238 KLGGYGMMRILVTMEPLTKEMVYP-FIVLALWGIIMTSSICLRQTDLKSLIAYSSVSHMGLVVSGILIQTPWGSTGALIL 316
Cdd:PRK02546 257 KMGGYALLRMNAGMLPDAHAQFAPlLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFTDLGTSGAMLQ 336
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 317 MIAHGLTSSALFCLANTNYERTHSRTMLLTRGLQMALPLMAAWWFIASLANLALPPLPNLMGELMILTSLFNWSWWT--- 393
Cdd:PRK02546 337 MISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMSGFVAELMVFVGFATSDAYTlpf 416
|
330 340
....*....|....*....|..
gi 327492677 394 ----IILTGLGTLITASYSLYM 411
Cdd:PRK02546 417 rvvvVFLAAVGVILTPIYLLSM 438
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
106-411 |
4.38e-39 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 147.40 E-value: 4.38e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 106 FLILA--------FGATEMIMFYVMFEATLIPTLILITRWGNQtERLSAGTYFLFYTLAGSLPLLIALLLLQ---NTKGS 174
Cdd:CHL00011 116 FLMLAmysgqiglFSSRDLLLFFIMWELELIPVYLLLSMWGGK-KRLYSATKFILYTAGGSIFLLIGVLGMGlygSNEPT 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 175 LSLLTLAY-SEPLLLttyaSKIWWTACILAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRILVTMEP 253
Cdd:CHL00011 195 LNFETLANqSYPVAL----EILFYIGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLP 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 254 LTKEMVYPFIVL-ALWGIIMTSSICLRQTDLKSLIAYSSVSHMGLVVSGILIQTPWGSTGALILMIAHGLTSSALFCLAN 332
Cdd:CHL00011 271 HAHSIFSPWLVIvGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAG 350
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 333 TNYERThsRTMLLTR--GLQMALPLMAAWWFIASLANLALPPLPNLMGELM----ILTS---LFNWSWWTIILTGLGTLI 403
Cdd:CHL00011 351 TSYDRI--RLVYLDEmgGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELIvffgIITSqkyLLMPKILITFVMAIGMIL 428
|
....*...
gi 327492677 404 TASYSLYM 411
Cdd:CHL00011 429 TPIYLLSM 436
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
60-411 |
2.05e-36 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 140.22 E-value: 2.05e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 60 DPISAPLLVLSCWLLPIMISASQshtekEPISRQRAYISLLTSLQLFLILAFGATEMIMFYVMFEATLIPTLILITRWGN 139
Cdd:PRK06473 78 DGLSLPLLVLNSLLTLIAIYSSD-----ESIQRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWGG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 140 QtERLSAGTYFLFYTLAGSLPLLIALLLLQNTKGSLSLltlAYsEPLLLTTY--ASKIWWTACIL-AFLVKMPLYGVHLW 216
Cdd:PRK06473 153 Q-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSF---DY-EPLRSHTLplSTQLLLLAPILvGFGIKIPLVPFHTW 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 217 LPKAHVEAPIAGSMVLAAVLLKLGGYGMMRILVTMEPLTKEMVYPFI-VLALWGIIMTSSICLRQTDLKSLIAYSSVSHM 295
Cdd:PRK06473 228 LPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLaTWAVVSVLYGASCAIAQKDMKKMVAYSSIGHM 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 296 GLVVSGILIQTPWGSTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLTRGL---QMALPLMAAWWFIASLANLALPP 372
Cdd:PRK06473 308 GYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGIPG 387
|
330 340 350
....*....|....*....|....*....|....*....
gi 327492677 373 LPNLMGELMILTSLFNWSWWTIILTGLGTLITASYSLYM 411
Cdd:PRK06473 388 MVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLL 426
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-110 |
7.50e-30 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 112.23 E-value: 7.50e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 1 MLTIILPTMMLIPTAWLVPAKWLWPSTLLHSFLIALASFQLFKNASETGWSELGPYMATDPISAPLLVLSCWLLPIMISA 80
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 327492677 81 SQSHTEKEPISRQRAYISLLTSLQLFLILA 110
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
14-387 |
2.34e-28 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 117.12 E-value: 2.34e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 14 TAWLVPAKWLWPSTLLHSFLIALASFQLFKNASETGWSELGPYMATDPISAPLLVLSCWLLPIMISASQSHTEkepisRQ 93
Cdd:PRK07363 32 TLVFAVLVLAWSLFLLTQFDLSDPGMQFQEYLPWNEPLGLSYSLGVDGLSLPLLVLNSLLTWIAIYSIGENTE-----RP 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 94 RAYISLLTSLQLFLILAFGATEMIMFYVMFEATLIPTLILITRWGNQtERLSAGTYFLFYTLAGSLPLLIALLLLQNTKG 173
Cdd:PRK07363 107 RLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSG 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 174 SLSLltlAYSEPLL--LTTYASKIWWTACILAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRILVTM 251
Cdd:PRK07363 186 STSF---DYDAISTqnLSLNTQLILLTGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQL 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 252 EPLTKEMVYPfiVLALWG---IIMTSSICLRQTDLKSLIAYSSVSHMGLVVSGILIQTPWGSTGALILMIAHGLTSSALF 328
Cdd:PRK07363 263 FPQTWSLVAP--GLAIIGtisVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLF 340
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 327492677 329 CLANTNYERTHSRTMLLTRGLQ---MALPLMAAWWFIASLANLALPPLPNLMGELMILTSLF 387
Cdd:PRK07363 341 HLVGIVERKVGTRDLDVLNGLMnpiRGLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQGSF 402
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
58-407 |
1.72e-27 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 114.59 E-value: 1.72e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 58 ATDPISAPLLVLSCWLLPIMISASQSHTEKepisRQRAYISLLTSLQLFLILAFGATEMIMFYVMFEATLIPTLILITRW 137
Cdd:PRK08375 74 RADSLSALFLLVTSILAIAALLYAIGYGEH----RQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMG 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 138 GNQtERLSAGTYFLFYTLAGSLPLLIALLLLQNTKGSLSLLTLA---YSEPLLLTTYAskiwwtACILAFLVKMPLYGVH 214
Cdd:PRK08375 150 GDR-RALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAgalAENPTVVTAFG------FVLLALALKAAVFPLH 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 215 LWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRILVTMEPLTKEMV----YPFIVLALWGIIMTSSICLRQTDLKSLIAYS 290
Cdd:PRK08375 223 TWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVFGGDFRFAlglgWLLAVLALLSMLVGSLAALGQDDVKRVLAYS 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 291 SVSHMGLVVSGILIQTPWGSTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLTRGLQMALPLMAAWWFIASLANLAL 370
Cdd:PRK08375 303 TVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGV 382
|
330 340 350
....*....|....*....|....*....|....*...
gi 327492677 371 PPLPNLMGELMILTSLFN-WSWWTIILTGLGTLITASY 407
Cdd:PRK08375 383 PPTSGFVSKWYLVVGAVEaGQWLVLAVLLASSLLALLY 420
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
27-387 |
2.42e-25 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 108.52 E-value: 2.42e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 27 TLLHSFLIALASFQLFKNASET---------GWS-ELGPYMATDPISAPLLVLSCWLLPIMISASQSHTEKEpiSRQRAY 96
Cdd:PRK12667 38 ALLVSLITLILSILLFIQVYSSnkpivylfgGWPaPIGIVYEVDLLGALLGLLTALVMFLILIYSYWYLEHE--SGPEWY 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 97 ISLLTSLQLFLILAFGATEMIMFYVMFEATLIPTLILITRWGNQTERLSAGTYFLFYTLAGSLPLLIALLLLQNTKGSL- 175
Cdd:PRK12667 116 YTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLn 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 176 ----SLLTLAYSEPLLLTTYASKIWWTACILA-----FLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMR 246
Cdd:PRK12667 196 madlSAKIRGLSFPLTGGLAGNPPLALGVALAlalwaFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIR 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 247 ILVT-------MEPLTKEMVYPFIVLALWGIIMTSSICLRQTDLKSLIAYSSVSHMGLVVSGILIQTPWGSTGALILMIA 319
Cdd:PRK12667 276 FLYTifgispsLIDFRAALSPILIILGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIIN 355
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 327492677 320 HGLTSSALFCLANTNYERTHSRTMLLTRGLQMALPLMAAWWFIASLANLALPPLPNLMGELMILTSLF 387
Cdd:PRK12667 356 HAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALL 423
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
207-404 |
2.08e-23 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 102.70 E-value: 2.08e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 207 KMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMR--ILVTMEPLTKEMVYPFIVLALWGIIMTSSICLRQTDLK 284
Cdd:PRK06458 227 KVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRyyILIDAAIGSDFPGRLLLIFGLLSVLVAAFFLLRQRDIK 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 285 SLIAYSSVSHMGLVVSGILIQTPWGSTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLTRGLQMALPLMAAWWFIAS 364
Cdd:PRK06458 307 RLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGWGLMLGA 386
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 327492677 365 LANLALPPLPNLMGELMILTSLFNWS-WWTIILTGLGTLIT 404
Cdd:PRK06458 387 LAIAGMPPFGVFISEFLILTAGLARGpLLIAILLLLLLTLA 427
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
91-387 |
4.13e-18 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 87.09 E-value: 4.13e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 91 SRQRAYI-SLLTSLQLF-LILAFGATEMIMFYVMFEATLIPTLILITRWGNQTERLSAGTYFLFYTLAGSLPLLIALLLL 168
Cdd:PRK08667 106 SNERANLlSALTALFILsMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVL 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 169 QNTKGSLSLLTLAYSEPLLLTTYaskiwwTACILAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIL 248
Cdd:PRK08667 186 FIQTGSFELSPLGASAGILSLVF------LLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFL 259
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 249 VTMepLTKEMVYPFIVL------ALWGIIMTssicLRQTDLKSLIAYSSVSHMGLVVSGILIQTPWGSTG---------- 312
Cdd:PRK08667 260 MDV--LSPELWWGVLILlagsisALLGVIYA----LKEHDLKGLLAYSSIENIGIILMGIGLYVIFGVYGldtlallalg 333
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 327492677 313 -ALILMIAHGLTSSALFCLANTNYERTHSRTMLLTRGLQMALPLMAAWWFIASLANLALPPLPNLMGELMILTSLF 387
Cdd:PRK08667 334 gALFHSLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFF 409
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
204-414 |
1.94e-17 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 84.42 E-value: 1.94e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 204 FLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRI--LVTMEPLTKEMVYPFIVLALWGIIMTSSICLRQT 281
Cdd:PRK08676 216 FLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLsaLLRQSGAAEQFSNVLIGLGIFSIAVAAFSMLSQR 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 282 DLKSLIAYSSVSHMGLVVSGILIQTPWGSTGALILMIAHGLTSSALFCLANTnYERTHSRTMLLTRGLQMALPLMAAWWF 361
Cdd:PRK08676 296 NLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGI-LHRQYRSDRFDRIFDVFRLQPVAAWGV 374
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 327492677 362 IA-SLANLALPPLPNLMGELMILTSLFNWSWWtIILTGLGTLITASYSLYMFLM 414
Cdd:PRK08676 375 ILgSAAIIGMPPFPLFLSKFFILLQLGGISVW-LVLAVLLLLLLAASSFAIFLL 427
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
91-410 |
5.78e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 83.08 E-value: 5.78e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 91 SRQRAYISLLTSLQLFLILAFGATEMIMFYVMFEATLIPTLILITrWGNQTERLSAGTYFLFYTLAGSLPLLIALLLLQN 170
Cdd:PRK07234 91 AKTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQ 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 171 TKGSLSLLTLAYSEPLLLTTYAskiwwtaciLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRilvt 250
Cdd:PRK07234 170 ANGTFAFSGLATADPEAFALIA---------LGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVR---- 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 251 MEPLTKEMVYPFIVLALWGIIMTSSICLRQTDLKSLIAYSSVSHMGLVVSGiliqtpwGSTGALiLMIAHGLTSSALFCL 330
Cdd:PRK07234 237 CALDVPGLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAA-------PLVGGL-YALAHGLVKSTLFLC 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 331 ANTNYERTHS--RTMLLTRGLQMALplmaawwFIASLANLALPPLPNLMGELMILTSLFNWSWWTIILTGLGTLITASYS 408
Cdd:PRK07234 309 AGALPSRNFTelISQMLGIGKWIPL-------TMASFSIAGFPLLAGFVSKVLTLKNLLPWQAIALNLAAVGTAASFWKF 381
|
..
gi 327492677 409 LY 410
Cdd:PRK07234 382 IF 383
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
105-407 |
8.77e-16 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 79.43 E-value: 8.77e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 105 LFLILAFGATEMIM------FYVMFEATLIPTLILiTRWGNQTERLSAGTYFLFYTLAGSLPLLIALLLLQNTKGSLSLL 178
Cdd:PRK08377 113 LFLLLMLGATGMIAtgdifnLFVFMEITAITAYAL-TAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMA 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 179 TLAySEPLLLTTYASKIWWTACILAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRILVTMEPLT--K 256
Cdd:PRK08377 192 HIA-QLAGTIDPTVAQVGLALLIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANgwS 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 257 EMVYPFIVLALWGIIMTSSICLRQTDLKSLIAYSSVSHMGLVVSGILIQTPWGSTGALILMIAHGLTSSALFCLANTNYE 336
Cdd:PRK08377 271 SVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGI 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 327492677 337 RTHSRTMLLTRGLQMALPLMAAWWFIASLANLALPPLPNLMGELMILTSLFNWSW-WTIILTGLGTLITASY 407
Cdd:PRK08377 351 TLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYtWPVALVLGASVVEAVY 422
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
214-402 |
2.09e-14 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 75.73 E-value: 2.09e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 214 HLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRilvtMEPLTKEMVYPFIVLALWG---IIMTSSICLRQTDLKSLIAY 289
Cdd:PRK12647 215 HFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLAR----LNPVLGGTPLWQTILPLFGgltMLTGALLAVRQTDLKLILAY 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 290 SSVSHMGLVVSGILIQTPWGSTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLTRGLQMALPLMAAWWFIASLANLA 369
Cdd:PRK12647 290 STVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMPITAAAALLAALSMAG 369
|
170 180 190
....*....|....*....|....*....|...
gi 327492677 370 LPPLPNLMGELMILTSLFNWSWWTIILTGLGTL 402
Cdd:PRK12647 370 LPPLFGFLAKELIYEALLEAPLWSLILTVAAVL 402
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-410 |
2.34e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 75.00 E-value: 2.34e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 109 LAFGATEMIMFYVMFEATLIPTLILITRwGNQTERLSAGTYFLFYTLAGSLPLLIALLLLQNTKGSLSLLTLAYSEPLLL 188
Cdd:PRK12665 126 NAFLAGDLFNLYVGFEILLVASYVLLTL-GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAVRLDELP 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 189 TTYASKIWWTACIlAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRILVTMEPlTKEMVYPFIVLALW 268
Cdd:PRK12665 205 SGTRTALFAVLLV-AFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFP-GGGLDTLLMVVALL 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 269 GIIMTSSICLRQTDLKSLIAYSSVSHMGLVVSGILIQTPWGSTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLTRG 348
Cdd:PRK12665 283 TMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLGG 362
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 327492677 349 LQMALPLMAAWWFIASLaNLA-LPPLPNLMGELMILTS-LFNWSWWTIILTGlGTLITASYSLY 410
Cdd:PRK12665 363 LAKASPLLAVLFFVPAL-NLGgIPPFSGFIGKVALLEAgAEDGTWLAWALVA-GGVVTSLLTLY 424
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
120-403 |
2.51e-14 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 74.99 E-value: 2.51e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 120 YVMFEATLIPTLILITrWGNQTERLSAGTYFLFYTLAGSLPLLIALLLLQNTKGSLSLLTLAYSEPLLLTTYASKIWWTA 199
Cdd:PRK12663 134 YVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGDTATLTTIALL 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 200 CILAFLVKMPLYGVHlWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRILVTMEPLTKEMVYPFIVLALWGIIMTSSI-CL 278
Cdd:PRK12663 213 FLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLATMAAITMVIGALgAL 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 279 RQTDLKSLIAYSSVSHMGLVVSGILIQTPWGSTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLTRGLQMALPLMAA 358
Cdd:PRK12663 292 AYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFGA 371
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 327492677 359 WWFIASLANLALPPLPNLMGELMILT-SLFNWSWW---TIILTGLGTLI 403
Cdd:PRK12663 372 LFLILIFAIGGLPPFSGFWGKVLLVQgALDNGAYIllaLMLITSLITMY 420
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
79-409 |
5.60e-14 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 74.31 E-value: 5.60e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 79 SASQSHTEKEPISrqraYISLLTSLQLFLILAFGATEMIMFYVMFEATLIPTLILITRWGNQTERLSAGTyfLFYTLAGS 158
Cdd:PRK12650 99 SARYLPRKKGNTS----FYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIARSGSGGEAGSIRT--LILTFFGG 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 159 LPLLIALLLLQNTKGSLSLltlaySEPLLLTTYASKIWWTAcILAFLVKMPLYG------VHLWLPKAHVEAPIAGSMVL 232
Cdd:PRK12650 173 LTLLAAVAIAATQTGTTSL-----SGILHSDVWAEKPGLTT-VVAVLIAVAAFTksaqfpFHFWLPEAMAAITPVSAFLH 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 233 AAVLLKLGGYGMMRILVTMEPLTKEMVYpFIVLALWGIIMTSSICLRQTDLKSLIAYSSVSHMGLVVSGILIQTPWGSTG 312
Cdd:PRK12650 247 AAAVVKAGIYLLLRFSPVFHDVAVWNWL-LIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTA 325
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 313 ALILMIAHGLTSSALFCLANTNYERTHSRTMLLTRGLQMALPLMAAWWFIASLANLALPPLPNLMGELMILTSLFNW--- 389
Cdd:PRK12650 326 AVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSKEGMLTAFLEApgg 405
|
330 340
....*....|....*....|...
gi 327492677 390 SWWTIILT---GLGTLITASYSL 409
Cdd:PRK12650 406 NAGVVLLLvgaALGAVFTFAYSA 428
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
111-386 |
6.76e-14 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 73.88 E-value: 6.76e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 111 FGATEMIMFYVMFEATLIPTLILITRwGNQTERLSAGTYFLFYTLaGSLPLLIALLLLQNTKGSLSLlTLAYSEPLLLTT 190
Cdd:PRK08668 115 FLANDLLTLYIFWEIMTFSSFMMVPM-GKKESRKASLKYFVLSAI-GAYAMLYAIFLIYAKTGTFDF-ADISQGLINDTS 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 191 YASKIWWTACILAF-LVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGM---MRILVTMEPLTKEMV------- 259
Cdd:PRK08668 192 TGFALIVFLFLLAFgVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFllvLYVLPGTKLFSEFGTyrgvplf 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 260 -YPFIVLALWGIIMTSSICLRQTDLKSLIAYSSVSHMGLVVSGILIQTPWGSTGALILMIAHGLTSSALFCLANTNYERT 338
Cdd:PRK08668 272 nYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIYRT 351
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 327492677 339 HSRTMLLTRGLQMALPLMAAWWFIASLANLALPPLPNLMGELMILTSL 386
Cdd:PRK08668 352 GTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEAL 399
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
214-424 |
1.44e-13 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 72.88 E-value: 1.44e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 214 HLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRI--LVTMEPLTKEMVypfIVLALWGIIMTSSICLRQTDLKSLIAYS 290
Cdd:COG1009 231 HFWLPDA-MEGPTPVSALLhAATMVKAGVYLLARLspLFALSPVWLTVV---AIIGAITALFAALIALAQTDIKRVLAYS 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 291 SVSHMGLVVSGILIQtpwGSTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLTRGLQMALPLMAAWWFIASLANLAL 370
Cdd:COG1009 307 TVSQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKMGGLRKKMPITAITFLIGALSLAGI 383
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 327492677 371 PPLPNLMGELMILTSLF---NWSWWTIILTGLGTLITASYSLYMFLMT----QRGPLPTHI 424
Cdd:COG1009 384 PPFAGFFSKEAILEAALeagGLGPLLLAVALLGAFLTAFYSFRLFFLVffgkPRPKTPKHP 444
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
214-413 |
5.86e-13 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 70.39 E-value: 5.86e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 214 HLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRILVTMEPLTKEMVYPFIVLALWGIIMTSSICLRQTDLKSLIAYSSV 292
Cdd:PRK06525 227 YSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTI 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 293 SHMGLVVSGILIQTpWGSTGALILMIA----HGLTSSALFCLANTNYERTHSRTMLLTRGLQMALPLMAAWWFIASLANL 368
Cdd:PRK06525 306 TQLGYMFFGLSLAI-LGSRLALEGSIAyifnHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKKLPLVGVGFCVAALAIT 384
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 327492677 369 ALPPLPNLMGELMILTSLF---NWSWWTIILTGLgTLITASYSLYMFL 413
Cdd:PRK06525 385 GVPPFNGFFSKFPIFAAGFelsVEYWILLPAMVL-LLIESVASFAWFL 431
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
105-387 |
2.66e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 68.59 E-value: 2.66e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 105 LFLILAFGATEMIM------FYVMFEATLIPTLILITRWGNQTERLSAGTYFLFYTLAGSLPLLIALLLLQNTKGSLSLL 178
Cdd:PRK08376 126 LILLLELGMLGMAItgdlfnFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMA 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 179 TLAYsEPLLLTTYASKIWWTACILAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLaaVLLKLGG-YGMMRILVTMEPLTKE 257
Cdd:PRK08376 206 YLAV-KMSENPTVVAKIALALFIAGLAMKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARVLFSIYGPAIN 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 258 MV---YPFIVLALWGIIMTSSICLRQTDLKSLIAYSSVSHMG---------LVVSGILIQTPWGST---GALILMIAHGL 322
Cdd:PRK08376 283 LAtvgWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGymllglgvgLAALGDPAMASYGEIalaGGIYHIVNHAL 362
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 327492677 323 TSSALFCLANTNYERTHSRTMLLTRGLQMALPLMAAWWFIASLANLALPPLPNLMGELMILTSLF 387
Cdd:PRK08376 363 YKALLFLTAGAVIYETGTRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSA 427
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
88-414 |
6.19e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 67.53 E-value: 6.19e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 88 EPISRQRAYISLLTSLQLFLILAfgaTEMIMFYVMFEATLIPTLILITRWGNQTERLSAGTYFLFYTLAGSLPLLIALLL 167
Cdd:PRK06589 113 DSSSRFLFFFNLTILIGVLIALS---SDLFTMFVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVIL 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 168 LQNTKGSL-----SLLTLAYSEPLLLTtyaskiwwtacILAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGY 242
Cdd:PRK06589 190 IYTKTGNLdfvsgGLFSKNQSIILLLM-----------FIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLF 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 243 GMMRILVTMEPLTK-----EMVYPFIVLALWGIIMTSSICLRQTDLKSLIAYSSVSHMGLVVSGILIQTPWGSTGALILM 317
Cdd:PRK06589 259 CIYKILLYIFGLSYlqrifAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHL 338
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 318 IAHGLTSSALFCLANTNYERTHSRTMLLTRGLQMALPLMAAWWFIASLANLALPPLPNLMGELMILTSLFNWS--WWTII 395
Cdd:PRK06589 339 VSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNqpWLSII 418
|
330
....*....|....*....
gi 327492677 396 LTGLGTLITASYSLYMFLM 414
Cdd:PRK06589 419 VMLVVIASSILSALYLLKI 437
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
94-431 |
2.09e-11 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 66.32 E-value: 2.09e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 94 RAYISLLtslqLFLILAFG---ATEMIMFYVMFEATLIPTLILITRWGNQTE-RLSAGTYFLFYTLAGSLPLL--IALLL 167
Cdd:PRK12646 111 RFYFYLT----LFMFSMIGivlSDNTILMYVFWELTSVSSFLLISYWYNNGDsQFGAIQSFMITVFGGLALLVgfIMLYI 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 168 LQNTKGSLSLLTLAYsepllltTYASKIWWTACILAFLV----KMPLYGVHLWLPKAhVEAPIAGSMVL-AAVLLKLGGY 242
Cdd:PRK12646 187 MTGTNNITEILGQAD-------HIKNHGLFIPMIFMFLLgaftKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIF 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 243 GMMRiLVTMEPLTKEMVYPFIVLALWGIIMTSSICLRQTDLKSLIAYSSVSHMGLVVS-----GILIQTPWGST------ 311
Cdd:PRK12646 259 LLFR-FTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAmvgigGGYAQHQQDAIasiyvf 337
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 312 ---GALILMIAHGLTSSALFCLANTNYERTHSRTMLLTRGLQMALPLMAAWWFIASLANLALPPLPNLMGELMILTSLFN 388
Cdd:PRK12646 338 vlfAALFHLMNHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQ 417
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 327492677 389 WS-------WWTIILTGLG---TLITASYSLYMFLMTQRGPLPTHILALEPSH 431
Cdd:PRK12646 418 TGqlsqfslISMIIIVFIGviaSIFTFTYALYMVKEVFWGKYDSKVFTKKNIH 470
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
201-402 |
5.18e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 64.58 E-value: 5.18e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 201 ILAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRILVTMEPLTKEMVYPFI-VLALWGIIMTSSICLR 279
Cdd:PRK07691 216 LFVFATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLIlILALLTIIFGVIGAVA 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 280 QTDLKSLIAYSSVSHMGLVVSGILIQTPWGSTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLTRGLQMALPLMAAW 359
Cdd:PRK07691 296 YFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLGWM 375
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 327492677 360 WFIASLANLALPPLPNLMGELMILTSLFN----WSWWTIILTGLGTL 402
Cdd:PRK07691 376 FFIAALSLAGIPPLSGFYGKFFIVEGTFEagfyVSGIIVLLSSLLVL 422
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
21-413 |
9.86e-11 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 63.60 E-value: 9.86e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 21 KWLWPSTLLHSFLIALASFQLFKNASETGWSELgpyMATDPIS--APLLVLSCWLLPIMISasQSHTEKEPISRQRAYIS 98
Cdd:COG1007 33 RLLAGLALLGLLLALALLLLALGGGTGTAFGGM---FVVDGFAlfFKLLILLAALLVLLLS--RDYLERRGLLRGEFYAL 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 99 LLTSLqLFLILAFGATEMIMFYVMFEATLIPTLILITRWGNQTERLSAGT-YF---------------LFYTLAGSLPLL 162
Cdd:COG1007 108 LLFAT-LGMMLMASANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALkYFllgalssgfllygisLLYGATGSLNLA 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 163 IALLLLQNTKGSLSLLTLAysepLLLTtyaskiwwtacILAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLlKLGGY 242
Cdd:COG1007 187 GIAAALAAGGANSPLLLLG----LVLV-----------LAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAF 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 243 GM-MRILVT-MEPLTKEMVYPFIVLALWGIIMTSSICLRQTDLKSLIAYSSVSHMGLVVSGILIQTPWGSTGALILMIAH 320
Cdd:COG1007 251 AAlLRLLVEaFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAY 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 321 GLTSSALF-CLANTNYERTHSRTMLLTRGLQMALPLMAAwWFIASLANLA-LPPLPNLMGELMILTSLFNWSWWTIILTG 398
Cdd:COG1007 331 LFMNLGAFaVILLLSRKGGEAEEIEDLAGLARRSPLLAL-AMTIFLLSLAgIPPTAGFFGKFYVFSAAVEAGLYWLAVIA 409
|
410 420
....*....|....*....|
gi 327492677 399 -LGTLITASYSL----YMFL 413
Cdd:COG1007 410 vLNSVISAYYYLrvvkAMYF 429
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
202-397 |
1.10e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 63.60 E-value: 1.10e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 202 LAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRI--------LVTMEPLTKEMvypFIVLALWGIIMT 273
Cdd:PRK12662 217 VGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIvydvfkanFVFTTLPFNNV---FMILAALAIVFG 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 274 SSICLRQTDLKSLIAYSSVSHMGLVVSGILIQTPWGSTGALILMIAHGLTSSALFCLANT---NYERTHSRTMLltrGLQ 350
Cdd:PRK12662 294 SVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSisyHFGTTKLEDCL---NLW 370
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 327492677 351 MALPLMAAWWFIASLANLALPPLPNLMGELMILTSLFNWSWWTIILT 397
Cdd:PRK12662 371 KSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVV 417
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
208-387 |
1.39e-10 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 63.37 E-value: 1.39e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 208 MPLygvHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRILVTMEPlTKEMVYPFIVLALWGIIMTSSI--CLRQTDLKS 285
Cdd:PRK06521 227 VPL---HVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVFDLLG-APGWWWGVLVLALGAISAVLGVlyALAEHDLKR 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 286 LIAYSSVSHMGLVVSGI---LI--------QTPWGSTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLTRGLQMALP 354
Cdd:PRK06521 303 LLAYSTIENIGIIFVGLglaMVfiaygmplLAALALTAALYHLLNHALFKSLLFLGAGAVLHATGTRDMEKLGGLIRRMP 382
|
170 180 190
....*....|....*....|....*....|...
gi 327492677 355 LMAAWWFIASLANLALPPLPNLMGELMILTSLF 387
Cdd:PRK06521 383 WTAWAFLIGCLAISALPPLNGFVSEWLLLQSLL 415
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
97-345 |
1.42e-09 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 59.94 E-value: 1.42e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 97 ISLLTSLqLFLILAFGATEMIMFYVMFEATLIPTLILITRWGNQTERLSAGTYFLFYTLAGSLPLLIALLLLQNTKGSLS 176
Cdd:MTH00062 75 FFLFLSL-IFSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFN 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 177 LLTLAYSEPLLLTTYaskiwwTACILAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRILVTMEPLTK 256
Cdd:MTH00062 154 FSDWGSDDSVSLIVY------YVLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSF 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 257 EMVYPFIVLALWGIIMTSSICLrqtDLKSLIAYSSVSHMgLVVSGILIQTPWGSTG-ALILMIAHGLTSSALFCLANTNY 335
Cdd:MTH00062 228 LGYLFLCCLFSVFFLITACSEL---DGKRWLAFLSLSHI-LVPVLGLFVGDWSSINlSFFYCLGHGLSAGLVFLLLWCFY 303
|
250
....*....|
gi 327492677 336 ERTHSRTMLL 345
Cdd:MTH00062 304 EVSGSRNWVL 313
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
202-403 |
1.87e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 59.48 E-value: 1.87e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 202 LAFLVKMPLYGVHLWLPKAHVEA--PIAGsmvLAAVLLKLGGYGMMRILVTMEPLTKEMVYPFIVLALWGIIMTSSIC-- 277
Cdd:PRK12666 218 VVFLIKAAMWPLNFWLPPAYAAAsaPVAA---LFAIMTKVGIYAILRLSTLLFGPEAGASAGFGQDWLLPGGLATLAFga 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 278 ---LRQTDLKSLIAYSSVSHMGLVVSGILIQTPWGSTGALILMIAHGLTSSALFCLAN-----------------TNYER 337
Cdd:PRK12666 295 igvLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLADlverqrgaaadrlavtpELYDL 374
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 327492677 338 THSRTMLLTRGLQMALPLMAAWWFIASLANLALPPLPNLMGELMILTSLFN--------WSWWTIILTGLGTLI 403
Cdd:PRK12666 375 DEEEEEEVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKFALLQALLNppgagaawWLWALVLLSGLAALI 448
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
208-388 |
2.77e-08 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 55.99 E-value: 2.77e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 208 MPLYGvhlWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRILVTMEPLTKEMVYPFIVLALWGIIMTSSICLRQTDLKSLI 287
Cdd:PRK08042 197 IPLHG---WVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLL 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 288 AYSSVSHMGLV-------VSGILIQTP----WGSTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLTRGLQMALPLM 356
Cdd:PRK08042 274 AYHTLENIGIIllglgagVTGIALEQPaliaLGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVI 353
|
170 180 190
....*....|....*....|....*....|..
gi 327492677 357 AAWWFIASLANLALPPLPNLMGELMILTSLFN 388
Cdd:PRK08042 354 SIAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
214-328 |
4.21e-08 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 55.21 E-value: 4.21e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 214 HLWLPKAHVEAPIAGSMVLAAVLlKLGGYGM-MRILVT-MEPLTKEMVYPFIVLALWGIIMTSSICLRQTDLKSLIAYSS 291
Cdd:PRK05777 224 HMWTPDVYEGAPTPVTAFLATAP-KIAAFAVlLRLLVVaFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSS 302
|
90 100 110
....*....|....*....|....*....|....*..
gi 327492677 292 VSHMGLVVSGILIQTPWGSTGALILMIAHGLTSSALF 328
Cdd:PRK05777 303 IAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAF 339
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
199-410 |
4.42e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 55.70 E-value: 4.42e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 199 ACILA-FLVKMPLYGVHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRiLVTMEPLTKEMVYPFIVLALWGIIMTSSI 276
Cdd:PRK12644 207 VLILVgALSKSAIVPFHFWLPGA-MAAPTPVSAYLhAAAMVKAGIYLVAR-LAPGFADVPVWRPTVLVLGLATMLLGGWR 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 277 CLRQTDLKSLIAYSSVSHMGLVVSGILIQTPWGSTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLTRGLQMALPLM 356
Cdd:PRK12644 285 ALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALFLVVGIIDHSTGTRDIRKLSGLGRRQPVL 364
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 357 AAWWFIASLANLALPPLPNLMGELMILTSLFN------WSWWTIILTGLGTLITASYSLY 410
Cdd:PRK12644 365 AVVAALAAASMAGLPPLLGFVAKEAALEAVLHdgalgpAGPVVLAGIVLGSILTVAYSLR 424
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
76-385 |
8.02e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 54.83 E-value: 8.02e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 76 IMISASQSHTEKEPISRQRAYISLLTSLQLFLILAFGATEMIMFYvmfEATLIPTLILITRWGNQTERLSAGTYFLFYTL 155
Cdd:PRK12649 96 IMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFW---ELTSITSFMLIGYWRHRPESVYGATKSLLITA 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 156 AGSLPLLIALLLLQNTKGSLSLLTLAYSEPLLLTTYASKIWWTACILAFL------VKMPLYgvhLWLPKAhVEAPIAGS 229
Cdd:PRK12649 173 GGGLFMFAGFLLLHVITGTYDIATILQDSELIENIKGHPLFLITLILIFIgaaaksAQGPFY---IWLPNA-MEAPTPVS 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 230 MVL-AAVLLKLGGYGMMRilvtMEPLTKEMVYPFIVLALWGII---MTSSICLRQTDLKSLIAYSSVSHMGLVVSGILIQ 305
Cdd:PRK12649 249 AFLhSATMVKAGVYLVAR----IHPIFSGTEAWFILVSGTGMItmvLAGFLAFRQTDIKAILAYSTISQLAYLMTMYGYT 324
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 306 TP----WGSTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLTRGLQMALPLMAAWWFIASLANLALPPLPNLMGELM 381
Cdd:PRK12649 325 TYhepgLGVAAATFHLLNHATFKACLFLVAGIVAHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSKEM 404
|
....
gi 327492677 382 ILTS 385
Cdd:PRK12649 405 FYET 408
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
197-435 |
1.31e-07 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 53.87 E-value: 1.31e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 197 WTACILAFLVKM---------PLygvHLWLPKAhVEAPI-------AGSMVLAAVLLklggygmmriLVTMEPLTKEMVY 260
Cdd:PRK07376 224 WLALLLCILVFLgpmaksaqfPL---HVWLPDA-MEGPTpisalihAATMVAAGVFL----------VARMYPVFEQFPA 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 261 PFIVLALWGII---MTSSICLRQTDLKSLIAYSSVSHMGLVVSGILIQTPwgSTGALILMiAHGLTSSALFCLANT---- 333
Cdd:PRK07376 290 VMTVIAWTGAItafLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCGAY--SAGLFHLM-THAYFKAMLFLGSGSvihg 366
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 334 -----NYERTHSRTMLLTRGLQMALPLMAAWWFIASLANLALPPLPNLMGELMILTSLFNWSwwtIILTGLGTL---ITA 405
Cdd:PRK07376 367 meevvGHDPVLAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEAN---PALWFVGFLtagMTA 443
|
250 260 270
....*....|....*....|....*....|....*..
gi 327492677 406 SYSLYMFLMTQRGP-------LPTHILALEPSHTREH 435
Cdd:PRK07376 444 FYMFRMYFLTFEGEfrgndkeLQKELLAAADAPGHHE 480
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
108-399 |
2.62e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 52.34 E-value: 2.62e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 108 ILAFGATEMIMFYVMFEATLIPTLILITRWGNQTERLSAG-TYFLFYTLAGSLPLLIALLLLQNTKG-SLSLLTLAYSEP 185
Cdd:MTH00196 7 LCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGlKYFVLGALSSGLFLFGCALLCGTTGGlHLSYINLVLNSG 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 186 LLLTTYASKIWWTACILAFLVKMPLYGVHLWLPKAHVEAPiagsMVLAAVLLKLGGYGMMRILVTMEPltkeMVYPFIVL 265
Cdd:MTH00196 87 QSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAP----TKTTALLAIVPKLGIFSILVSIGL----NVNILLIG 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 266 ALWGIIMTSSICLRQTDLKSLIAYSSVSHMGLVVSGILIQTPWGSTGALILMIAHGLTSSALFCLA---NTNyerthsRT 342
Cdd:MTH00196 159 GLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVFSIIlalNVY------KN 232
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 327492677 343 MLLT-RGLQMALPLMAAWWFIASLANLALPPLPNLMGELMILTSLFNWSWWTIILTGL 399
Cdd:MTH00196 233 LIIEfSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAV 290
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
201-409 |
2.67e-07 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 52.64 E-value: 2.67e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 201 ILAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRILVTMEPLTKEMVYPFI-VLALWGIIMTSSICLR 279
Cdd:TIGR01770 210 LVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYILFGFSEAWQIFLaIIAFLSMLIGNFGALA 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 280 QTDLKSLIAYSSVSHMGLVVSGILIQTPWGSTGALILMIAHGLTSSALF-CLANT-NYERTHSRTMLLTRGLQMALPLMA 357
Cdd:TIGR01770 290 QKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAFgVLSLLrSYKDEWIEYISDFAGLFKTNPILA 369
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 327492677 358 AWWFIASLANLALPPLPNLMGELMILTSLFNWS-WWTIILTGLGTLITASYSL 409
Cdd:TIGR01770 370 ILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGlYWLAVIAVLTSVIGAFYYL 422
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
66-383 |
1.25e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 50.73 E-value: 1.25e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 66 LLVLSCWLLPIMISASQSHTEKEPISRQRAYISLLTSLQLFLILAfgaTEMIMFYVMFEATLIPTLILITRWGNQTERLS 145
Cdd:MTH00032 86 LLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTS---DNYLQLFIGWEGVGVCSYLLVAFWTTRIQANK 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 146 AGTYFLFYTLAGSLPLLIALLLLQNTKGSLSLLTL---AYSEPLLLTTYASKIWWTACILAFLV-----------KMPLY 211
Cdd:MTH00032 163 AAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFnggSVGSGIMDRGYYGGGAYESPLAPFAIigillligcigKSAQL 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 212 GVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRILvtmePLTKEMVYPFIVLALWGII---MTSSICLRQTDLKSLIA 288
Cdd:MTH00032 243 GLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSF----PLFEKAPLTLLIITIFGALtafFAATVGLVQNDLKKVIA 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 289 YSSVSHMGLVVsgILIQTPWGSTGALILMIAHGLTSSALFCLA-----NTNYERTHSRTMlltRGLQMALPLMAAWWFIA 363
Cdd:MTH00032 319 YSTCSQLGYMV--LIIGIEGSHNVGLFHLVNHAFFKALLFLSAgsvihSTTVDEQDMRKM---GGLIHSIPFTYTMMLIG 393
|
330 340
....*....|....*....|
gi 327492677 364 SLANLALPPLPNLMGELMIL 383
Cdd:MTH00032 394 SFSIMGLPYLTGFYSKDLIL 413
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
263-382 |
1.98e-06 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 50.03 E-value: 1.98e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 263 IVLALWGIIMTSSICLRQTDLKSLIAYSSVSHMGLVVSGILIQTPWGSTGALILMIAHGLTSSALFCLANTNYERTHSRT 342
Cdd:PRK06277 270 IALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSN 349
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 327492677 343 MLLTRGLQMALPLMAAWWFIASLANLALPPLPNLMGELMI 382
Cdd:PRK06277 350 LRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLML 389
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
201-414 |
2.13e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 49.50 E-value: 2.13e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 201 ILAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLlKLGGYGMMRILVTmeplTKEMVYPFIVLALWGIIMTSSICLRQ 280
Cdd:MTH00144 91 LLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQ-KVAPLFLLSNFLD----LYWLAYLLCVISVLSALVGSIGGLNQ 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 281 TDLKSLIAYSSVSHMGLVVSGILiqtpWGSTGALILMIAHGLTSSALF-CLANTNYerthSRTMLLTRGLQMALPLMAAW 359
Cdd:MTH00144 166 TQVRALLAYSSISHTGWMLVAIL----HGSWLMWMYFLIYIVSSGFLFfSLWSGDS----GSMKDLGSLKPSYKTGLSII 237
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 327492677 360 WFIASLAnlALPPLPNLMGELMILTSLFNWSWWTIILTG-LGTLITASYSLYMFLM 414
Cdd:MTH00144 238 SLLLSLG--GLPPFLGFCSKLLVLISSMESSPLLLILLLlLGSLISLFFYLSVFFS 291
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
280-409 |
1.78e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 44.03 E-value: 1.78e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 280 QTDLKSLIAYSSVSHMGLVVSGILIQTPWGSTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLTRGLQMALPLMAAW 359
Cdd:PRK12648 292 QHDLKGLLAYSTISHLGLITLLLGLGSPLAAVAAIFHIINHATFKASLFMAAGIIDHETGTRDMRRLSGLRRLMPITATL 371
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 327492677 360 WFIASLANLALPPLPNLMGELMIL-----TSLFNWSWWTI-ILTGLGTLITASYSL 409
Cdd:PRK12648 372 AMVAAAAMAGVPLLNGFLSKEMFFaetldTHLLGSLDWLLpVAATLAGAFSVAYSL 427
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
214-396 |
3.13e-04 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 42.97 E-value: 3.13e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 214 HLWLPKAhVEAPIAGSMVLAAVLLKLGGYgmmrILVTMEPLTKemVYPFIVLALWGI-----IMTSSICLRQTDLKSLIA 288
Cdd:PRK07390 241 HLWLDEA-MEGPNPASILRNSVVVATGAW----VLIKLQPVLA--LSPVALTVLIVIgtvtaIGASLVAIAQIDIKRALS 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 289 YSSVSHMGLVVsgILIQTPWGSTgALILMIAHGLTSSALFCLANTNYERTHSRTMLLTRGLQMALPLMAAWWFIASLANL 368
Cdd:PRK07390 314 YSTSAYLGLVF--IAVGLQQPDI-ALLLLLTHAIAKALLFMSVGSIILTTITQDLTELGGLWSRMPATTLAFLVGSAGLV 390
|
170 180
....*....|....*....|....*...
gi 327492677 369 ALPPLPNLMGELMILTSLFNWSWWTIIL 396
Cdd:PRK07390 391 ALLPLGGFWALLRLADGLWAVSPWLVGV 418
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
271-411 |
9.02e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 41.55 E-value: 9.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 271 IMTSSICLRQTDLKSLIAYSSVSHMGLVVSGILIQTPwgsTGALILMIAHGLTSSALF-CLANTNYERTHSRTMLLTRGL 349
Cdd:MTH00209 251 LMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQP---ELAFFHLITHALFKALLFiCAGNIIHSHGHSQDIRMVGNL 327
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 327492677 350 QMALPLMAAWWFIASLANLALPPLPNLMGELMILTSLF--NWSWWTIILTGLGTLITASYSLYM 411
Cdd:MTH00209 328 WYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLesNMPIMTLILMFLSTSLTAAYSMRL 391
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
201-411 |
1.47e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 40.53 E-value: 1.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 201 ILAFLVKMPLYGVHLWLPkaHVEAPIagSMVLAAVLLKLGGYGMMRILVTMEPLTKEMVYPFIvlALWGIIMTSSICLRQ 280
Cdd:MTH00011 95 LVSLMLKLGMAPCHFWFP--SVMSSI--SWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSM--AAMSALAGGLGGMNQ 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 281 TDLKSLIAYSSVSHMGLVVsgiLIQTPWGSTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLTRGlqmalPLMAAWW 360
Cdd:MTH00011 169 TQLRPLLAYSSIGHMGWMT---MISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMS-----QTTSMSL 240
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 327492677 361 FIASLANLALPPLPNLMGELMILTSLFNWSWWTIILTGL-GTLITASYSLYM 411
Cdd:MTH00011 241 FIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIvGSLMNLFYYLNL 292
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
202-406 |
1.50e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 40.93 E-value: 1.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 202 LAFLVKMPLYGVHL--WLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRILVTMEPLTKEMV-YPFIVLALWGIIMTSSICL 278
Cdd:PRK06459 166 FGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPIGYFgLTILAIGAFSILFGALYAY 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 279 RQTDLKSLIAYSSVSHMG--LVVSGILIQTPWGST--------GALILMIAHGLTSSALFCLANTnyerTHSRTMLLTRG 348
Cdd:PRK06459 246 VSENVKGLLAFSTIENNGaiLVALGLYMVTKQLITsiehfsliTVILYSFAHSVAKTGLFLSSGL----QEKQSITYSKK 321
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 327492677 349 LQMALPLMAAWWFIASLAnlALPPLPNLMGELMILTSLFNWSWWTIILTGLGTLITAS 406
Cdd:PRK06459 322 IRNRWIELGLTLLASSLS--GLLPNIGGVASWLLLESLFMFAYVLHNVISILFIVTGA 377
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
212-415 |
2.51e-03 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 40.45 E-value: 2.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 212 GVHLWLPKAH-----VEAPI-AGSMVLAAVLLklggygmmriLVTMEPLTKEMVYPFIVLALWG---IIMTSSICLRQTD 282
Cdd:MTH00020 228 GLHTWLPDAMegptpVSALIhAATMVTAGVFL----------LIRSSPLFEQAPLALIIVTIVGsltVFFAATVGLVQND 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 283 LKSLIAYSSVSHMGLVVSGILIQTpwgSTGALILMIAHGLTSSALFCLANTN-YERTHSRTMLLTRGLQMALPLMAAWWF 361
Cdd:MTH00020 298 LKKVIAYSTCSQLGYMVVACGLSH---YSISLFHLMNHAFFKALLFLSAGSViHALSDEQDMRKMGGLISFLPLTYIFFL 374
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 327492677 362 IASLANLALPPLPNLMGELMILTSLFNWSWWTII--LTGLGTLITASYSLYMFLMT 415
Cdd:MTH00020 375 IGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAywLGCFSALLTAFYSIRLIYLT 430
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
99-388 |
8.56e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 38.41 E-value: 8.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 99 LLTSLQLFLILAFGATEMIMFYVMFEATLIPTLILITRWGNQTERLSAGTYFLFYTLAGSLPLLIallllqntkgslSLL 178
Cdd:MTH00200 9 FILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFG------------GLL 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 179 TLAYSEPLLLTTYASKIWWTACILAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLlKLGGYGMMRILVTMEPLTKem 258
Cdd:MTH00200 77 NAWTSGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQ-KLAPFALLIQLAPALNSNI-- 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 259 vypFIVLALWGIIMTSSICLRQTDLKSLIAYSSVSHMGLVVSGIliqtPWGSTGALILMIAHGLTSSALFCLANTNyert 338
Cdd:MTH00200 154 ---LLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGL----VYSPNLALLYLLLYVIITLTVFLLLNLL---- 222
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 327492677 339 HSRTMLLTRGLQMALPLMAAWWFIASLANLALPPLPNLMGELMILTSLFN 388
Cdd:MTH00200 223 NSTKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSK 272
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
214-419 |
9.17e-03 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 38.37 E-value: 9.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 214 HLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRilvtMEPLTKEMVYPFIVLALWGIIM---TSSICLRQTDLKSLIAY 289
Cdd:PRK12645 230 YIWLPDA-MEAPTPVSAYLhSATMVKAGIYLVAR----FTPIFAGSQVWFWTVTLVGLITlfwGSLNAVKQTDLKGILAF 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327492677 290 SSVSHMGLVVS-------GILIQTPWGS------TGALILMIAHGLTSSALFCLANTNYERTHSRTMLLTRGLQMALPLM 356
Cdd:PRK12645 305 STVSQLGLIMSllgigaaSLHYQGDDSKiyaaaiTAAIFHLINHATFKGSLFMIVGIVDHETGTRDIRKLGGLMTIMPIT 384
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 327492677 357 AAWWFIASLANLALPPLPNLMGELMILTS--------LFNWSWWTI---ILTGLGTLITASYSLYMFLMTQRGP 419
Cdd:PRK12645 385 FTIALIGALSMAGLPPFNGFLSKEMFFESmlnateanLFSLDTWGVlfpVIAWVASVFTFVYSIIFIFKTFFGK 458
|
|
| |
