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Conserved domains on  [gi|326664967|ref|XP_687281|]
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nucleolar protein 7 [Danio rerio]

Protein Classification

NUC129 domain-containing protein( domain architecture ID 10548220)

NUC129 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
NUC129 pfam08157
NUC129 domain; This C terminal domain is found in a novel family of hypothetical nucleolar ...
 157-218 4.05e-31

NUC129 domain; This C terminal domain is found in a novel family of hypothetical nucleolar proteins.


:

Pssm-ID: 462383  Cd Length: 62  Bit Score: 109.41  E-value: 4.05e-31
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 326664967  157 YTVMRLKDESASNSLQQSAVDFIQSRFYGPRTNRTTNTELLSLNKKRGVNKGAAVQFANKKW 218
Cdd:pfam08157   1 YTAVRLKDQSLANSQQQAAKDFIQSRLYGPGSNRTTANEFLSLNNKRGPVKKAAVQFVNKSW 62
 
Name Accession Description Interval E-value
NUC129 pfam08157
NUC129 domain; This C terminal domain is found in a novel family of hypothetical nucleolar ...
 157-218 4.05e-31

NUC129 domain; This C terminal domain is found in a novel family of hypothetical nucleolar proteins.


Pssm-ID: 462383  Cd Length: 62  Bit Score: 109.41  E-value: 4.05e-31
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 326664967  157 YTVMRLKDESASNSLQQSAVDFIQSRFYGPRTNRTTNTELLSLNKKRGVNKGAAVQFANKKW 218
Cdd:pfam08157   1 YTAVRLKDQSLANSQQQAAKDFIQSRLYGPGSNRTTANEFLSLNNKRGPVKKAAVQFVNKSW 62
 
Name Accession Description Interval E-value
NUC129 pfam08157
NUC129 domain; This C terminal domain is found in a novel family of hypothetical nucleolar ...
 157-218 4.05e-31

NUC129 domain; This C terminal domain is found in a novel family of hypothetical nucleolar proteins.


Pssm-ID: 462383  Cd Length: 62  Bit Score: 109.41  E-value: 4.05e-31
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 326664967  157 YTVMRLKDESASNSLQQSAVDFIQSRFYGPRTNRTTNTELLSLNKKRGVNKGAAVQFANKKW 218
Cdd:pfam08157   1 YTAVRLKDQSLANSQQQAAKDFIQSRLYGPGSNRTTANEFLSLNNKRGPVKKAAVQFVNKSW 62
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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