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Conserved domains on  [gi|2130940435|ref|XP_044910348|]
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Alstrom syndrome protein 1 isoform X11 [Felis catus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1692-1738 9.73e-20

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


:

Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 84.79  E-value: 9.73e-20
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 2130940435 1692 QQELPDSSLTEQAQKVSPVPGPAEQKTGIPTLTSTSYSLGEKPSLFY 1738
Cdd:pfam18727    1 QQELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1457-1503 9.73e-20

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


:

Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 84.79  E-value: 9.73e-20
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 2130940435 1457 QQELPDSSLTEQAQKVSPVPGPAEQKTGIPTLTSTSYSLGEKPSLFY 1503
Cdd:pfam18727    1 QQELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1645-1690 1.12e-19

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


:

Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 84.79  E-value: 1.12e-19
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 2130940435 1645 QQELPDSHLTEQAQKVSPVTGPAEQKTGIPTLTSASHSHREKPNLF 1690
Cdd:pfam18727    1 QQELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIF 46
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1880-1926 7.03e-19

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


:

Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 82.47  E-value: 7.03e-19
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 2130940435 1880 QQELPDSHLTEQAQKLSLVPGPADQKTEISTVTSASYSHIEKPFIFY 1926
Cdd:pfam18727    1 QQELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1928-1973 6.12e-18

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


:

Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 79.78  E-value: 6.12e-18
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 2130940435 1928 QDLPDSHLSQESLKVTAVSEPVDKKTGIPVVPSTSYSQREKPIIFY 1973
Cdd:pfam18727    2 QELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1551-1597 1.26e-17

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


:

Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 79.01  E-value: 1.26e-17
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 2130940435 1551 QQVLPDSHLTEETLKASSAPRPGDAKTGVPTVPSSSYSPREKSGIFY 1597
Cdd:pfam18727    1 QQELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1786-1832 1.88e-17

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


:

Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 78.62  E-value: 1.88e-17
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 2130940435 1786 QQVLPDSHLTEETLKASSAPRPGDAKTGVPTVPSNSYSPREKSGIFY 1832
Cdd:pfam18727    1 QQELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1410-1455 4.60e-17

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


:

Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 77.47  E-value: 4.60e-17
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 2130940435 1410 QQELPDSSLTEQAQKVSPVTGSAEQKTGIPTLTSASHSHREKPNLF 1455
Cdd:pfam18727    1 QQELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIF 46
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1316-1362 6.17e-17

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


:

Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 77.08  E-value: 6.17e-17
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 2130940435 1316 QQALPDSHLIEQAQKVSAVPGPVDQKTRIPAASSTYYSYGERPQIFY 1362
Cdd:pfam18727    1 QQELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1363-1408 8.51e-17

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


:

Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 76.70  E-value: 8.51e-17
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 2130940435 1363 QQTLPESHLPEQALKFSAAPGSYEQKTGIPTVTSTPYSHREKLNLF 1408
Cdd:pfam18727    1 QQELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIF 46
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 2163-2208 4.38e-16

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


:

Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 74.39  E-value: 4.38e-16
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 2130940435 2163 QGLTDSQIPQEALKVSAVRGPADQKTGLPSESSSPYSHREKPIIFY 2208
Cdd:pfam18727    2 QELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 2399-2443 7.06e-16

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


:

Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 74.00  E-value: 7.06e-16
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 2130940435 2399 QQELPD--LTQEALKVLKVPGLGGQKTGIPAVTSTFYSHREKPIISY 2443
Cdd:pfam18727    1 QQELPDshLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 2210-2255 7.20e-16

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


:

Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 74.00  E-value: 7.20e-16
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 2130940435 2210 QGLTGSQVPLEALKASAVPGPADQKTGLPSEPSSSYSHREKPIIFY 2255
Cdd:pfam18727    2 QELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1176-1221 7.41e-16

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


:

Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 74.00  E-value: 7.41e-16
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 2130940435 1176 QYLPDRHLTEEAPKVLAVLGPADQKTGIPTVFPSSYPLGEKHGIFY 1221
Cdd:pfam18727    2 QELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 2257-2302 1.48e-15

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


:

Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 73.23  E-value: 1.48e-15
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 2130940435 2257 QDLTDSQVPQEALKVSAVPGPADQKTGLPSEPSSSYSLGGKPVIFY 2302
Cdd:pfam18727    2 QELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 2350-2398 4.25e-15

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


:

Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 71.69  E-value: 4.25e-15
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*....
gi 2130940435 2350 QQPLSDSQLPVEALKVSAVSGPGDQKTRKPTVTSTSYSHRekEKPIISY 2398
Cdd:pfam18727    1 QQELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHR--EKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 2116-2161 6.46e-15

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


:

Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 71.30  E-value: 6.46e-15
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 2130940435 2116 QGLTDSQVPQEALKVSTVPGRADQKTGLPSELSSSYSHREKPIIFS 2161
Cdd:pfam18727    2 QELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1269-1315 1.59e-14

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


:

Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 70.15  E-value: 1.59e-14
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 2130940435 1269 QQQSSDSHLTEQALKVSVVSGPAGENTGIPILPSVSSSLGEKPSVFY 1315
Cdd:pfam18727    1 QQELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 2303-2349 2.48e-14

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


:

Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 69.76  E-value: 2.48e-14
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 2130940435 2303 QQALSDRHLTEEAVNISASPGPADQETRVSTVPSISYSHIEKPNVLY 2349
Cdd:pfam18727    1 QQELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 2022-2067 7.71e-14

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


:

Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 68.22  E-value: 7.71e-14
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 2130940435 2022 QALAGSLLLEEALKVSVLPGPADQKAGLSSEPPSSYSHGEKPIIFY 2067
Cdd:pfam18727    2 QELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1129-1173 8.33e-14

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


:

Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 68.22  E-value: 8.33e-14
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 2130940435 1129 QQAL-DSHTTEKTLKVSTVHELADQKTGISTVPSSSYSQRGKPGIF 1173
Cdd:pfam18727    1 QQELpDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIF 46
ALMS_repeat super family cl40041
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1975-2020 9.55e-14

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


The actual alignment was detected with superfamily member pfam18727:

Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 67.84  E-value: 9.55e-14
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 2130940435 1975 QAIPDIHLTEEALKVSAISGSADWKTGIPTVSSISSSHTEEPVSFS 2020
Cdd:pfam18727    2 QELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat super family cl40041
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 2671-2716 1.22e-13

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


The actual alignment was detected with superfamily member pfam18727:

Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 67.45  E-value: 1.22e-13
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 2130940435 2671 QELPDKHLAEDALNISSIPVPADQKSLLPTAPPGSFSHREKPNLFY 2716
Cdd:pfam18727    2 QELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat super family cl40041
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 2534-2577 7.50e-13

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


The actual alignment was detected with superfamily member pfam18727:

Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 65.53  E-value: 7.50e-13
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 2130940435 2534 QQELPD--VTEKVLKVFALPGPADQKTEIPTGPSSSYSHKEKLNIS 2577
Cdd:pfam18727    1 QQELPDshLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIF 46
ALMS_repeat super family cl40041
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1739-1785 9.57e-13

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


The actual alignment was detected with superfamily member pfam18727:

Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 65.14  E-value: 9.57e-13
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 2130940435 1739 QQELPDNPLTEQAQKVLAIPGPDDQNTGISIGSSRPYSLGEQPSIFS 1785
Cdd:pfam18727    1 QQELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat super family cl40041
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1504-1550 2.11e-12

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


The actual alignment was detected with superfamily member pfam18727:

Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 63.98  E-value: 2.11e-12
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 2130940435 1504 QQELPDNPLTEQAQKVLAIPGPDDQNTGISIGSSRPYSLGEQPNIFS 1550
Cdd:pfam18727    1 QQELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat super family cl40041
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1223-1268 3.83e-12

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


The actual alignment was detected with superfamily member pfam18727:

Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 63.21  E-value: 3.83e-12
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 2130940435 1223 QALPDSYVTEEALKVSAVPVSADQRTEKITVPSTSYLQREKHVNFS 1268
Cdd:pfam18727    2 QELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat super family cl40041
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 2069-2113 4.52e-12

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


The actual alignment was detected with superfamily member pfam18727:

Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 63.21  E-value: 4.52e-12
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*
gi 2130940435 2069 QGLTDSQVPQETLEVSAVPGPAAQKTGLPSEPSSCDSHKEKPIIF 2113
Cdd:pfam18727    2 QELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIF 46
ALMS_repeat super family cl40041
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1833-1879 1.40e-11

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


The actual alignment was detected with superfamily member pfam18727:

Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 61.67  E-value: 1.40e-11
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 2130940435 1833 QQVLPGCHLSEEALKVSVATVPAEIKSGLPSEASSFYTEREKTSIFY 1879
Cdd:pfam18727    1 QQELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat super family cl40041
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1598-1644 2.10e-11

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


The actual alignment was detected with superfamily member pfam18727:

Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 61.29  E-value: 2.10e-11
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 2130940435 1598 QQVLPGCHLSEEALKVSVATVPAEIKSGLPSEASNFYTEREKTSIFY 1644
Cdd:pfam18727    1 QQELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat super family cl40041
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 2445-2488 4.24e-11

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


The actual alignment was detected with superfamily member pfam18727:

Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 60.52  E-value: 4.24e-11
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 2130940435 2445 QELSDPN--EGALRVLGTPGPADQKTGIQIGPSTSYSHRESPIFSY 2488
Cdd:pfam18727    2 QELPDSHltEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat super family cl40041
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 2493-2533 7.40e-11

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


The actual alignment was detected with superfamily member pfam18727:

Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 59.75  E-value: 7.40e-11
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 2130940435 2493 SDITEETWKVSPVSGPANQKTEIHIIPSSSYSYREKDSILY 2533
Cdd:pfam18727    7 SHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat super family cl40041
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 2717-2763 1.46e-09

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


The actual alignment was detected with superfamily member pfam18727:

Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 55.90  E-value: 1.46e-09
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 2130940435 2717 QQDFPDRHLPEDSVMFSRGLGQADQITGLSTVTPGTYSHSEKQKLVS 2763
Cdd:pfam18727    1 QQELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat super family cl40041
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 2633-2669 1.47e-03

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


The actual alignment was detected with superfamily member pfam18727:

Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 38.95  E-value: 1.47e-03
                           10        20        30
                   ....*....|....*....|....*....|....*..
gi 2130940435 2633 EDILKISPVPEPIVVNSGIPIPLSSSSSHREKSNIFY 2669
Cdd:pfam18727   11 EEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
Tubulin_FtsZ_Cetz-like super family cl10017
Tubulin protein family of FtsZ and CetZ-like; This family includes tubulin alpha-, beta-, ...
 3574-3798 5.38e-03

Tubulin protein family of FtsZ and CetZ-like; This family includes tubulin alpha-, beta-, gamma-, delta-, epsilon, and zeta-tubulins as well as FtsZ and CetZ, all of which are involved in polymer formation. Tubulin is the major component of microtubules, but also exists as a heterodimer and as a curved oligomer. Microtubules exist in all eukaryotic cells and are responsible for many functions, including cellular transport, cell motility, and mitosis. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ can polymerize into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria, archaea, and chloroplasts. A recent study found that CetZ proteins, formerly annotated FtsZ type 2, are not required for cell division, whereas FtsZ proteins play an important role. Instead, CetZ proteins are shown to be involved in controlling archaeal cell shape dynamics. The results from inactivation studies of CetZ proteins in Haloferax volcanii suggest that CetZ1 is essential for normal swimming motility and rod-cell development.


The actual alignment was detected with superfamily member cd06060:

Pssm-ID: 471962 [Multi-domain]  Cd Length: 539  Bit Score: 42.69  E-value: 5.38e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130940435 3574 NQCTLVTSASTPPSNRKAlscvritlyPKTPSKVDSGTLDRRLHS-------LDPAS-KTRMNSEFNSDLQTISSRSlep 3645
Cdd:cd06060    274 EHSSLFVPLSLPSLLWRK---------PGWPRTFPHLDYSSPYHTsavlaaaLDTATlPYRLKSSSVSMSDLCSSLT--- 341

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130940435 3646 tsklSASKPVAQNQESLGFLGLKSSPDFQVVQSPLPD-SNTISQDLKTIPFqnSQIVTSRqtqvNISDLEGYSSPEGI-P 3723
Cdd:cd06060    342 ----FSGRKVAALSLALPFPLLLGSSLLDSLQDLLGDlSLTPSCQNETDVF--AQSVVLR----GIPESRLKSPLQPRsP 411

                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2130940435 3724 VSADRLSEEIKTPFSAFSGKLSSDAVTQITTESPGKTTFSSEIFINAEDHGFESPE--PSTQNVDKVPV--KFVSSSSV 3798
Cdd:cd06060    412 ASRCSSVEEVLEGYLQCTFPGSSSAVTTLPQPLPVPTPFPSIFSPSLGRKGFLLDDsrPASLDVESVPVlaSLQSSSAL 490
 
Name Accession Description Interval E-value
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1692-1738 9.73e-20

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 84.79  E-value: 9.73e-20
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 2130940435 1692 QQELPDSSLTEQAQKVSPVPGPAEQKTGIPTLTSTSYSLGEKPSLFY 1738
Cdd:pfam18727    1 QQELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1457-1503 9.73e-20

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 84.79  E-value: 9.73e-20
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 2130940435 1457 QQELPDSSLTEQAQKVSPVPGPAEQKTGIPTLTSTSYSLGEKPSLFY 1503
Cdd:pfam18727    1 QQELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1645-1690 1.12e-19

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 84.79  E-value: 1.12e-19
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 2130940435 1645 QQELPDSHLTEQAQKVSPVTGPAEQKTGIPTLTSASHSHREKPNLF 1690
Cdd:pfam18727    1 QQELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIF 46
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1880-1926 7.03e-19

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 82.47  E-value: 7.03e-19
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 2130940435 1880 QQELPDSHLTEQAQKLSLVPGPADQKTEISTVTSASYSHIEKPFIFY 1926
Cdd:pfam18727    1 QQELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1928-1973 6.12e-18

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 79.78  E-value: 6.12e-18
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 2130940435 1928 QDLPDSHLSQESLKVTAVSEPVDKKTGIPVVPSTSYSQREKPIIFY 1973
Cdd:pfam18727    2 QELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1551-1597 1.26e-17

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 79.01  E-value: 1.26e-17
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 2130940435 1551 QQVLPDSHLTEETLKASSAPRPGDAKTGVPTVPSSSYSPREKSGIFY 1597
Cdd:pfam18727    1 QQELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1786-1832 1.88e-17

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 78.62  E-value: 1.88e-17
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 2130940435 1786 QQVLPDSHLTEETLKASSAPRPGDAKTGVPTVPSNSYSPREKSGIFY 1832
Cdd:pfam18727    1 QQELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1410-1455 4.60e-17

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 77.47  E-value: 4.60e-17
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 2130940435 1410 QQELPDSSLTEQAQKVSPVTGSAEQKTGIPTLTSASHSHREKPNLF 1455
Cdd:pfam18727    1 QQELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIF 46
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1316-1362 6.17e-17

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 77.08  E-value: 6.17e-17
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 2130940435 1316 QQALPDSHLIEQAQKVSAVPGPVDQKTRIPAASSTYYSYGERPQIFY 1362
Cdd:pfam18727    1 QQELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1363-1408 8.51e-17

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 76.70  E-value: 8.51e-17
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 2130940435 1363 QQTLPESHLPEQALKFSAAPGSYEQKTGIPTVTSTPYSHREKLNLF 1408
Cdd:pfam18727    1 QQELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIF 46
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 2163-2208 4.38e-16

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 74.39  E-value: 4.38e-16
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 2130940435 2163 QGLTDSQIPQEALKVSAVRGPADQKTGLPSESSSPYSHREKPIIFY 2208
Cdd:pfam18727    2 QELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 2399-2443 7.06e-16

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 74.00  E-value: 7.06e-16
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 2130940435 2399 QQELPD--LTQEALKVLKVPGLGGQKTGIPAVTSTFYSHREKPIISY 2443
Cdd:pfam18727    1 QQELPDshLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 2210-2255 7.20e-16

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 74.00  E-value: 7.20e-16
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 2130940435 2210 QGLTGSQVPLEALKASAVPGPADQKTGLPSEPSSSYSHREKPIIFY 2255
Cdd:pfam18727    2 QELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1176-1221 7.41e-16

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 74.00  E-value: 7.41e-16
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 2130940435 1176 QYLPDRHLTEEAPKVLAVLGPADQKTGIPTVFPSSYPLGEKHGIFY 1221
Cdd:pfam18727    2 QELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 2257-2302 1.48e-15

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 73.23  E-value: 1.48e-15
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 2130940435 2257 QDLTDSQVPQEALKVSAVPGPADQKTGLPSEPSSSYSLGGKPVIFY 2302
Cdd:pfam18727    2 QELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 2350-2398 4.25e-15

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 71.69  E-value: 4.25e-15
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*....
gi 2130940435 2350 QQPLSDSQLPVEALKVSAVSGPGDQKTRKPTVTSTSYSHRekEKPIISY 2398
Cdd:pfam18727    1 QQELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHR--EKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 2116-2161 6.46e-15

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 71.30  E-value: 6.46e-15
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 2130940435 2116 QGLTDSQVPQEALKVSTVPGRADQKTGLPSELSSSYSHREKPIIFS 2161
Cdd:pfam18727    2 QELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1269-1315 1.59e-14

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 70.15  E-value: 1.59e-14
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 2130940435 1269 QQQSSDSHLTEQALKVSVVSGPAGENTGIPILPSVSSSLGEKPSVFY 1315
Cdd:pfam18727    1 QQELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 2303-2349 2.48e-14

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 69.76  E-value: 2.48e-14
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 2130940435 2303 QQALSDRHLTEEAVNISASPGPADQETRVSTVPSISYSHIEKPNVLY 2349
Cdd:pfam18727    1 QQELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 2022-2067 7.71e-14

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 68.22  E-value: 7.71e-14
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 2130940435 2022 QALAGSLLLEEALKVSVLPGPADQKAGLSSEPPSSYSHGEKPIIFY 2067
Cdd:pfam18727    2 QELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1129-1173 8.33e-14

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 68.22  E-value: 8.33e-14
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 2130940435 1129 QQAL-DSHTTEKTLKVSTVHELADQKTGISTVPSSSYSQRGKPGIF 1173
Cdd:pfam18727    1 QQELpDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIF 46
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1975-2020 9.55e-14

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 67.84  E-value: 9.55e-14
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 2130940435 1975 QAIPDIHLTEEALKVSAISGSADWKTGIPTVSSISSSHTEEPVSFS 2020
Cdd:pfam18727    2 QELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 2671-2716 1.22e-13

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 67.45  E-value: 1.22e-13
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 2130940435 2671 QELPDKHLAEDALNISSIPVPADQKSLLPTAPPGSFSHREKPNLFY 2716
Cdd:pfam18727    2 QELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 2534-2577 7.50e-13

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 65.53  E-value: 7.50e-13
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 2130940435 2534 QQELPD--VTEKVLKVFALPGPADQKTEIPTGPSSSYSHKEKLNIS 2577
Cdd:pfam18727    1 QQELPDshLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIF 46
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1739-1785 9.57e-13

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 65.14  E-value: 9.57e-13
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 2130940435 1739 QQELPDNPLTEQAQKVLAIPGPDDQNTGISIGSSRPYSLGEQPSIFS 1785
Cdd:pfam18727    1 QQELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1504-1550 2.11e-12

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 63.98  E-value: 2.11e-12
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 2130940435 1504 QQELPDNPLTEQAQKVLAIPGPDDQNTGISIGSSRPYSLGEQPNIFS 1550
Cdd:pfam18727    1 QQELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1223-1268 3.83e-12

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 63.21  E-value: 3.83e-12
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 2130940435 1223 QALPDSYVTEEALKVSAVPVSADQRTEKITVPSTSYLQREKHVNFS 1268
Cdd:pfam18727    2 QELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 2069-2113 4.52e-12

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 63.21  E-value: 4.52e-12
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*
gi 2130940435 2069 QGLTDSQVPQETLEVSAVPGPAAQKTGLPSEPSSCDSHKEKPIIF 2113
Cdd:pfam18727    2 QELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIF 46
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1833-1879 1.40e-11

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 61.67  E-value: 1.40e-11
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 2130940435 1833 QQVLPGCHLSEEALKVSVATVPAEIKSGLPSEASSFYTEREKTSIFY 1879
Cdd:pfam18727    1 QQELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1598-1644 2.10e-11

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 61.29  E-value: 2.10e-11
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 2130940435 1598 QQVLPGCHLSEEALKVSVATVPAEIKSGLPSEASNFYTEREKTSIFY 1644
Cdd:pfam18727    1 QQELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 2445-2488 4.24e-11

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 60.52  E-value: 4.24e-11
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 2130940435 2445 QELSDPN--EGALRVLGTPGPADQKTGIQIGPSTSYSHRESPIFSY 2488
Cdd:pfam18727    2 QELPDSHltEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 2493-2533 7.40e-11

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 59.75  E-value: 7.40e-11
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 2130940435 2493 SDITEETWKVSPVSGPANQKTEIHIIPSSSYSYREKDSILY 2533
Cdd:pfam18727    7 SHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 2717-2763 1.46e-09

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 55.90  E-value: 1.46e-09
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 2130940435 2717 QQDFPDRHLPEDSVMFSRGLGQADQITGLSTVTPGTYSHSEKQKLVS 2763
Cdd:pfam18727    1 QQELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 2633-2669 1.47e-03

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 38.95  E-value: 1.47e-03
                           10        20        30
                   ....*....|....*....|....*....|....*..
gi 2130940435 2633 EDILKISPVPEPIVVNSGIPIPLSSSSSHREKSNIFY 2669
Cdd:pfam18727   11 EEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
misato cd06060
Misato segment II tubulin-like domain; Human Misato shows similarity with Tubulin/FtsZ family ...
 3574-3798 5.38e-03

Misato segment II tubulin-like domain; Human Misato shows similarity with Tubulin/FtsZ family of GTPases and is localized to the the outer membrane of mitochondria. It has a role in mitochondrial fusion and in mitochondrial distribution and morphology. Mutations in its Drosophila homolog (misato) lead to irregular chromosome segregation during mitosis. Deletion of the budding yeast homolog DML1 is lethal and unregulate expression of DML1 leads to mitochondrial dispersion and abnormalities in cell morphology. The Misato/DML1 protein family is conserved from yeast to human, but its exact function is still unknown.


Pssm-ID: 276964 [Multi-domain]  Cd Length: 539  Bit Score: 42.69  E-value: 5.38e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130940435 3574 NQCTLVTSASTPPSNRKAlscvritlyPKTPSKVDSGTLDRRLHS-------LDPAS-KTRMNSEFNSDLQTISSRSlep 3645
Cdd:cd06060    274 EHSSLFVPLSLPSLLWRK---------PGWPRTFPHLDYSSPYHTsavlaaaLDTATlPYRLKSSSVSMSDLCSSLT--- 341

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130940435 3646 tsklSASKPVAQNQESLGFLGLKSSPDFQVVQSPLPD-SNTISQDLKTIPFqnSQIVTSRqtqvNISDLEGYSSPEGI-P 3723
Cdd:cd06060    342 ----FSGRKVAALSLALPFPLLLGSSLLDSLQDLLGDlSLTPSCQNETDVF--AQSVVLR----GIPESRLKSPLQPRsP 411

                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2130940435 3724 VSADRLSEEIKTPFSAFSGKLSSDAVTQITTESPGKTTFSSEIFINAEDHGFESPE--PSTQNVDKVPV--KFVSSSSV 3798
Cdd:cd06060    412 ASRCSSVEEVLEGYLQCTFPGSSSAVTTLPQPLPVPTPFPSIFSPSLGRKGFLLDDsrPASLDVESVPVlaSLQSSSAL 490
 
Name Accession Description Interval E-value
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1692-1738 9.73e-20

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 84.79  E-value: 9.73e-20
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 2130940435 1692 QQELPDSSLTEQAQKVSPVPGPAEQKTGIPTLTSTSYSLGEKPSLFY 1738
Cdd:pfam18727    1 QQELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1457-1503 9.73e-20

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 84.79  E-value: 9.73e-20
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 2130940435 1457 QQELPDSSLTEQAQKVSPVPGPAEQKTGIPTLTSTSYSLGEKPSLFY 1503
Cdd:pfam18727    1 QQELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1645-1690 1.12e-19

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 84.79  E-value: 1.12e-19
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 2130940435 1645 QQELPDSHLTEQAQKVSPVTGPAEQKTGIPTLTSASHSHREKPNLF 1690
Cdd:pfam18727    1 QQELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIF 46
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1880-1926 7.03e-19

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 82.47  E-value: 7.03e-19
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 2130940435 1880 QQELPDSHLTEQAQKLSLVPGPADQKTEISTVTSASYSHIEKPFIFY 1926
Cdd:pfam18727    1 QQELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1928-1973 6.12e-18

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 79.78  E-value: 6.12e-18
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 2130940435 1928 QDLPDSHLSQESLKVTAVSEPVDKKTGIPVVPSTSYSQREKPIIFY 1973
Cdd:pfam18727    2 QELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1551-1597 1.26e-17

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 79.01  E-value: 1.26e-17
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 2130940435 1551 QQVLPDSHLTEETLKASSAPRPGDAKTGVPTVPSSSYSPREKSGIFY 1597
Cdd:pfam18727    1 QQELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1786-1832 1.88e-17

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 78.62  E-value: 1.88e-17
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 2130940435 1786 QQVLPDSHLTEETLKASSAPRPGDAKTGVPTVPSNSYSPREKSGIFY 1832
Cdd:pfam18727    1 QQELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1410-1455 4.60e-17

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 77.47  E-value: 4.60e-17
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 2130940435 1410 QQELPDSSLTEQAQKVSPVTGSAEQKTGIPTLTSASHSHREKPNLF 1455
Cdd:pfam18727    1 QQELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIF 46
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1316-1362 6.17e-17

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 77.08  E-value: 6.17e-17
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 2130940435 1316 QQALPDSHLIEQAQKVSAVPGPVDQKTRIPAASSTYYSYGERPQIFY 1362
Cdd:pfam18727    1 QQELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1363-1408 8.51e-17

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 76.70  E-value: 8.51e-17
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 2130940435 1363 QQTLPESHLPEQALKFSAAPGSYEQKTGIPTVTSTPYSHREKLNLF 1408
Cdd:pfam18727    1 QQELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIF 46
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 2163-2208 4.38e-16

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 74.39  E-value: 4.38e-16
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 2130940435 2163 QGLTDSQIPQEALKVSAVRGPADQKTGLPSESSSPYSHREKPIIFY 2208
Cdd:pfam18727    2 QELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 2399-2443 7.06e-16

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 74.00  E-value: 7.06e-16
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 2130940435 2399 QQELPD--LTQEALKVLKVPGLGGQKTGIPAVTSTFYSHREKPIISY 2443
Cdd:pfam18727    1 QQELPDshLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 2210-2255 7.20e-16

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 74.00  E-value: 7.20e-16
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 2130940435 2210 QGLTGSQVPLEALKASAVPGPADQKTGLPSEPSSSYSHREKPIIFY 2255
Cdd:pfam18727    2 QELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1176-1221 7.41e-16

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 74.00  E-value: 7.41e-16
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 2130940435 1176 QYLPDRHLTEEAPKVLAVLGPADQKTGIPTVFPSSYPLGEKHGIFY 1221
Cdd:pfam18727    2 QELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 2257-2302 1.48e-15

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 73.23  E-value: 1.48e-15
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 2130940435 2257 QDLTDSQVPQEALKVSAVPGPADQKTGLPSEPSSSYSLGGKPVIFY 2302
Cdd:pfam18727    2 QELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 2350-2398 4.25e-15

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 71.69  E-value: 4.25e-15
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*....
gi 2130940435 2350 QQPLSDSQLPVEALKVSAVSGPGDQKTRKPTVTSTSYSHRekEKPIISY 2398
Cdd:pfam18727    1 QQELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHR--EKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 2116-2161 6.46e-15

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 71.30  E-value: 6.46e-15
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 2130940435 2116 QGLTDSQVPQEALKVSTVPGRADQKTGLPSELSSSYSHREKPIIFS 2161
Cdd:pfam18727    2 QELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1269-1315 1.59e-14

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 70.15  E-value: 1.59e-14
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 2130940435 1269 QQQSSDSHLTEQALKVSVVSGPAGENTGIPILPSVSSSLGEKPSVFY 1315
Cdd:pfam18727    1 QQELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 2303-2349 2.48e-14

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 69.76  E-value: 2.48e-14
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 2130940435 2303 QQALSDRHLTEEAVNISASPGPADQETRVSTVPSISYSHIEKPNVLY 2349
Cdd:pfam18727    1 QQELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 2022-2067 7.71e-14

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 68.22  E-value: 7.71e-14
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 2130940435 2022 QALAGSLLLEEALKVSVLPGPADQKAGLSSEPPSSYSHGEKPIIFY 2067
Cdd:pfam18727    2 QELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1129-1173 8.33e-14

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 68.22  E-value: 8.33e-14
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 2130940435 1129 QQAL-DSHTTEKTLKVSTVHELADQKTGISTVPSSSYSQRGKPGIF 1173
Cdd:pfam18727    1 QQELpDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIF 46
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1975-2020 9.55e-14

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 67.84  E-value: 9.55e-14
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 2130940435 1975 QAIPDIHLTEEALKVSAISGSADWKTGIPTVSSISSSHTEEPVSFS 2020
Cdd:pfam18727    2 QELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 2671-2716 1.22e-13

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 67.45  E-value: 1.22e-13
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 2130940435 2671 QELPDKHLAEDALNISSIPVPADQKSLLPTAPPGSFSHREKPNLFY 2716
Cdd:pfam18727    2 QELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 2534-2577 7.50e-13

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 65.53  E-value: 7.50e-13
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 2130940435 2534 QQELPD--VTEKVLKVFALPGPADQKTEIPTGPSSSYSHKEKLNIS 2577
Cdd:pfam18727    1 QQELPDshLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIF 46
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1739-1785 9.57e-13

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 65.14  E-value: 9.57e-13
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 2130940435 1739 QQELPDNPLTEQAQKVLAIPGPDDQNTGISIGSSRPYSLGEQPSIFS 1785
Cdd:pfam18727    1 QQELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1504-1550 2.11e-12

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 63.98  E-value: 2.11e-12
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 2130940435 1504 QQELPDNPLTEQAQKVLAIPGPDDQNTGISIGSSRPYSLGEQPNIFS 1550
Cdd:pfam18727    1 QQELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1223-1268 3.83e-12

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 63.21  E-value: 3.83e-12
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 2130940435 1223 QALPDSYVTEEALKVSAVPVSADQRTEKITVPSTSYLQREKHVNFS 1268
Cdd:pfam18727    2 QELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 2069-2113 4.52e-12

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 63.21  E-value: 4.52e-12
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*
gi 2130940435 2069 QGLTDSQVPQETLEVSAVPGPAAQKTGLPSEPSSCDSHKEKPIIF 2113
Cdd:pfam18727    2 QELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIF 46
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1833-1879 1.40e-11

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 61.67  E-value: 1.40e-11
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 2130940435 1833 QQVLPGCHLSEEALKVSVATVPAEIKSGLPSEASSFYTEREKTSIFY 1879
Cdd:pfam18727    1 QQELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 1598-1644 2.10e-11

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 61.29  E-value: 2.10e-11
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 2130940435 1598 QQVLPGCHLSEEALKVSVATVPAEIKSGLPSEASNFYTEREKTSIFY 1644
Cdd:pfam18727    1 QQELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 2445-2488 4.24e-11

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 60.52  E-value: 4.24e-11
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 2130940435 2445 QELSDPN--EGALRVLGTPGPADQKTGIQIGPSTSYSHRESPIFSY 2488
Cdd:pfam18727    2 QELPDSHltEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 2493-2533 7.40e-11

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 59.75  E-value: 7.40e-11
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 2130940435 2493 SDITEETWKVSPVSGPANQKTEIHIIPSSSYSYREKDSILY 2533
Cdd:pfam18727    7 SHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 2717-2763 1.46e-09

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 55.90  E-value: 1.46e-09
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 2130940435 2717 QQDFPDRHLPEDSVMFSRGLGQADQITGLSTVTPGTYSHSEKQKLVS 2763
Cdd:pfam18727    1 QQELPDSHLTEEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
ALMS_repeat pfam18727
Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It ...
 2633-2669 1.47e-03

Alstrom syndrome repeat; This entry contains a single repeat unit of approximately 47 AA. It is found in Alstrom syndrome protein 1 (ALMS1) and homologs.


Pssm-ID: 376150 [Multi-domain]  Cd Length: 47  Bit Score: 38.95  E-value: 1.47e-03
                           10        20        30
                   ....*....|....*....|....*....|....*..
gi 2130940435 2633 EDILKISPVPEPIVVNSGIPIPLSSSSSHREKSNIFY 2669
Cdd:pfam18727   11 EEALKVSAVPGPADQKTGIPTVTSSSYSHREKPSIFY 47
misato cd06060
Misato segment II tubulin-like domain; Human Misato shows similarity with Tubulin/FtsZ family ...
 3574-3798 5.38e-03

Misato segment II tubulin-like domain; Human Misato shows similarity with Tubulin/FtsZ family of GTPases and is localized to the the outer membrane of mitochondria. It has a role in mitochondrial fusion and in mitochondrial distribution and morphology. Mutations in its Drosophila homolog (misato) lead to irregular chromosome segregation during mitosis. Deletion of the budding yeast homolog DML1 is lethal and unregulate expression of DML1 leads to mitochondrial dispersion and abnormalities in cell morphology. The Misato/DML1 protein family is conserved from yeast to human, but its exact function is still unknown.


Pssm-ID: 276964 [Multi-domain]  Cd Length: 539  Bit Score: 42.69  E-value: 5.38e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130940435 3574 NQCTLVTSASTPPSNRKAlscvritlyPKTPSKVDSGTLDRRLHS-------LDPAS-KTRMNSEFNSDLQTISSRSlep 3645
Cdd:cd06060    274 EHSSLFVPLSLPSLLWRK---------PGWPRTFPHLDYSSPYHTsavlaaaLDTATlPYRLKSSSVSMSDLCSSLT--- 341

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130940435 3646 tsklSASKPVAQNQESLGFLGLKSSPDFQVVQSPLPD-SNTISQDLKTIPFqnSQIVTSRqtqvNISDLEGYSSPEGI-P 3723
Cdd:cd06060    342 ----FSGRKVAALSLALPFPLLLGSSLLDSLQDLLGDlSLTPSCQNETDVF--AQSVVLR----GIPESRLKSPLQPRsP 411

                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2130940435 3724 VSADRLSEEIKTPFSAFSGKLSSDAVTQITTESPGKTTFSSEIFINAEDHGFESPE--PSTQNVDKVPV--KFVSSSSV 3798
Cdd:cd06060    412 ASRCSSVEEVLEGYLQCTFPGSSSAVTTLPQPLPVPTPFPSIFSPSLGRKGFLLDDsrPASLDVESVPVlaSLQSSSAL 490
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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