NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|2082245377|ref|XP_042925453|]
View 

uncharacterized protein CHLRE_04g230732v5 [Chlamydomonas reinhardtii]

Protein Classification

sulfotransferase family protein( domain architecture ID 229543)

sulfotransferase family protein may utilize 3'-phospho-5'-adenylyl sulfate (PAPS) as sulfonate donor to catalyze the transfer of sulfate to its substrate(s)

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
Sulfotransfer_1 super family cl21551
Sulfotransferase domain;
113-375 1.18e-10

Sulfotransferase domain;


The actual alignment was detected with superfamily member pfam00685:

Pssm-ID: 473908 [Multi-domain]  Cd Length: 253  Bit Score: 61.59  E-value: 1.18e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2082245377 113 IIGVSKCGTTDLYGRLRRHPDLAD--GAKGPHFWDECPYPP--KGACTAPPNGDFDGYVNLFEKgasqikANPLAIVgea 188
Cdd:pfam00685   6 IVTYPKSGTTWLQEILSLIPNRGDfeKSEEPHLFNNHNRSPflEWYPGDTYFDVAEGPVRLNAL------PSPRIIK--- 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2082245377 189 ssnTYTGVYTFVRGLARLKTNVtlaqlihaaqpyqrqIIIMRDPVSRYYSAFHYYRR-----KPSEPFEGPDKFHERver 263
Cdd:pfam00685  77 ---THLPLHLLPKSLWDPNAKI---------------IYLVRNPKDVAVSYYHFFRMakllkAPGTPFEFVEDFLNG--- 135

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2082245377 264 diknwnacvsrhsqqecvkryepqQLVKGMYAEFVEAWAAVFPREQLLFLRTEDYKAAPREHLQAVMRFLGmRDLSDTET 343
Cdd:pfam00685 136 ------------------------KVNCGSYFDHVKGWWKLRPPGNILFLRYEDLKKDPRGEIKKIAEFLG-IPLTEEEL 190

                         250       260       270
                  ....*....|....*....|....*....|..
gi 2082245377 344 DGLMKLRRFNAQSEKYPRMWPRSRKLLEDFYR 375
Cdd:pfam00685 191 DKIVKHLSFENMKGNPCLNYSKLPKEVSPFFR 222
 
Name Accession Description Interval E-value
Sulfotransfer_1 pfam00685
Sulfotransferase domain;
113-375 1.18e-10

Sulfotransferase domain;


Pssm-ID: 425820 [Multi-domain]  Cd Length: 253  Bit Score: 61.59  E-value: 1.18e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2082245377 113 IIGVSKCGTTDLYGRLRRHPDLAD--GAKGPHFWDECPYPP--KGACTAPPNGDFDGYVNLFEKgasqikANPLAIVgea 188
Cdd:pfam00685   6 IVTYPKSGTTWLQEILSLIPNRGDfeKSEEPHLFNNHNRSPflEWYPGDTYFDVAEGPVRLNAL------PSPRIIK--- 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2082245377 189 ssnTYTGVYTFVRGLARLKTNVtlaqlihaaqpyqrqIIIMRDPVSRYYSAFHYYRR-----KPSEPFEGPDKFHERver 263
Cdd:pfam00685  77 ---THLPLHLLPKSLWDPNAKI---------------IYLVRNPKDVAVSYYHFFRMakllkAPGTPFEFVEDFLNG--- 135

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2082245377 264 diknwnacvsrhsqqecvkryepqQLVKGMYAEFVEAWAAVFPREQLLFLRTEDYKAAPREHLQAVMRFLGmRDLSDTET 343
Cdd:pfam00685 136 ------------------------KVNCGSYFDHVKGWWKLRPPGNILFLRYEDLKKDPRGEIKKIAEFLG-IPLTEEEL 190

                         250       260       270
                  ....*....|....*....|....*....|..
gi 2082245377 344 DGLMKLRRFNAQSEKYPRMWPRSRKLLEDFYR 375
Cdd:pfam00685 191 DKIVKHLSFENMKGNPCLNYSKLPKEVSPFFR 222
 
Name Accession Description Interval E-value
Sulfotransfer_1 pfam00685
Sulfotransferase domain;
113-375 1.18e-10

Sulfotransferase domain;


Pssm-ID: 425820 [Multi-domain]  Cd Length: 253  Bit Score: 61.59  E-value: 1.18e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2082245377 113 IIGVSKCGTTDLYGRLRRHPDLAD--GAKGPHFWDECPYPP--KGACTAPPNGDFDGYVNLFEKgasqikANPLAIVgea 188
Cdd:pfam00685   6 IVTYPKSGTTWLQEILSLIPNRGDfeKSEEPHLFNNHNRSPflEWYPGDTYFDVAEGPVRLNAL------PSPRIIK--- 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2082245377 189 ssnTYTGVYTFVRGLARLKTNVtlaqlihaaqpyqrqIIIMRDPVSRYYSAFHYYRR-----KPSEPFEGPDKFHERver 263
Cdd:pfam00685  77 ---THLPLHLLPKSLWDPNAKI---------------IYLVRNPKDVAVSYYHFFRMakllkAPGTPFEFVEDFLNG--- 135

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2082245377 264 diknwnacvsrhsqqecvkryepqQLVKGMYAEFVEAWAAVFPREQLLFLRTEDYKAAPREHLQAVMRFLGmRDLSDTET 343
Cdd:pfam00685 136 ------------------------KVNCGSYFDHVKGWWKLRPPGNILFLRYEDLKKDPRGEIKKIAEFLG-IPLTEEEL 190

                         250       260       270
                  ....*....|....*....|....*....|..
gi 2082245377 344 DGLMKLRRFNAQSEKYPRMWPRSRKLLEDFYR 375
Cdd:pfam00685 191 DKIVKHLSFENMKGNPCLNYSKLPKEVSPFFR 222
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH