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Conserved domains on  [gi|2080271814|ref|XP_042850350|]
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sulfate transporter [Panthera tigris]

Protein Classification

solute carrier family 26 protein( domain architecture ID 11489705)

solute carrier family 26 protein similar to eukaryotic sulfate transporters such as Arabidopsis thaliana sulfate transporter 1.1, which is a high-affinity H(+)/sulfate cotransporter that mediates the uptake of the environmental sulfate by plant roots under low-sulfur conditions

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
sulP TIGR00815
high affinity sulphate transporter 1; The SulP family is a large and ubiquitous family with ...
96-717 0e+00

high affinity sulphate transporter 1; The SulP family is a large and ubiquitous family with over 30 sequenced members derived from bacteria, fungi, plants and animals. Many organisms including Bacillus subtilis, Synechocystis sp, Saccharomyces cerevisiae, Arabidopsis thaliana and Caenorhabditis elegans possess multiple SulP family paralogues. Many of these proteins are functionally characterized, and all are sulfate uptake transporters. Some transport their substrate with high affinities, while others transport it with relatively low affinities. Most function by SO42- :H+symport, but SO42- :HCO3- antiport has been reported for the rat protein (spP45380). The bacterial proteins vary in size from 434 residues to 566 residues with one exception, a Mycobacterium tuberculosis protein with 784 residues. The eukaryotic proteins vary in size from 611 residues to 893 residues with one exception, a protein designated "early nodulin 70 protein" from Glycine max which is reported to be of 485 residues. Thus, the eukaryotic proteins are almost without exception larger than the prokaryotic proteins. These proteins exhibit 10-13 putative transmembrane a-helical spanners (TMSs) depending on the protein. The phylogenetic tree for the SulP family reveals five principal branches. Three of these are bacterial specific as follows: one bears a single protein from M. tuberculosis; a second bears two proteins, one from M. tuberculosis, the other from Synechocystis sp, and the third bears all remaining prokaryotic proteins. The remaining two clusters bear only eukaryotic proteins with the animal proteins all localized to one branch and the plant and fungal proteins localized to the other. The generalized transport reactions catalyzed by SulP family proteins are: (1) SO42- (out) + nH+ (out) --> SO42- (in) + nH+ (in). (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out). [Transport and binding proteins, Anions]


:

Pssm-ID: 273284 [Multi-domain]  Cd Length: 552  Bit Score: 670.58  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814  96 PVLRWLPKYDLKKnILGDVMSGLIVGILLVPQSIAYSLLAGQEPIYGLYTSFFASIIYFLLGTSRHISVGIFGILCLMIG 175
Cdd:TIGR00815   1 PVLRWLRKYRLKK-FKGDLMAGLTVGILLIPQAIAYAKLAGLPPIYGLYTSFVPPIIYALFGSSRHIAIGPTASVSLLLG 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 176 EVVDRELHKAGYDtahtapslgmvsngstllnqtsdwicdrscYAIAVGSTVTFMAGVYQVAMGFFQVGFVSVYLSDALL 255
Cdd:TIGR00815  80 SLVQREGLQGLFD------------------------------DYIRLAFTATLLAGIFQVIMGLLRLGFLIEYLSHAVL 129
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 256 SGFVTGASFTILTSQAKYLLGLSL-PRSNGVGSLITTWIHIFRNihrtNICDLITSLLCLLVLLPTKELNEHFKSKLKAP 334
Cdd:TIGR00815 130 VGFTAGAAITIGLSQLKGLLGLSIfVKTDILGVVISTWASLHQN----NWCTLVIGLLFLLFLLATKELGKRNKKLLWAP 205
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 335 IPTELIVVVAATLASHFGkLHEKYNSSIAGHIPTG--FMPPKAPDWNLIPSLAVDAIAISIIGFAITVSLSEMFAKKHGY 412
Cdd:TIGR00815 206 APAPLLVVVLATLIVTIG-LHDSQGVSIVGHIPQGlsFFPPITFTWQHLPTLAPDAIAIAIVGLTESILTARVFAAMTGY 284
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 413 TVRANQEMYAIGFCNIIPSFFHCFTTSAALAKTLVKESTGCQTQLSAVVTALVLLLVLLVIAPLFYSLQKSVLGVITIVN 492
Cdd:TIGR00815 285 EIDANKELVALGIANIVGSFFSCYPATGSLSRTAVNYKAGCKTQLSAIVMAIVVLLVLLVLAPLFYYIPLAALAAIIISA 364
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 493 LRGaLRKFKDLPKMWKVSRMDTVIWFVTMLSSALISTEIGLLIGVCFSMFCVILRTQKPKISLLGWVEESEIFESMSAYK 572
Cdd:TIGR00815 365 AVG-LIDIRELYLLWKADKMDFVVWLGTFLGVVFTSIEIGLLVGVSLSAFFFILRVARPRAAVLGRIPGTEDYENIEQYP 443
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 573 NLQTKPGVKIFRFVAPLYYINKECFKSALYKKTLnpvlvkaaqkkaaktkitketvifsgiqdevslQLSHDPldlHTIV 652
Cdd:TIGR00815 444 KAQTPPGILIFRVDGPLYFANAEDLKERLLKWLE---------------------------------TLELDP---QIII 487
                         570       580       590       600       610       620
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2080271814 653 IDCSAIQFLDTAGIHTLKEVRRDYEAIGIQVLLAQCNPSVRDSLACGEYCKKEEENLLFYSVYEA 717
Cdd:TIGR00815 488 LDMSAVPFLDTSGIHALEELFKELKARGIQLLLANPNPAVISTLARAGFVELIGEEHFFPSVHDA 552
 
Name Accession Description Interval E-value
sulP TIGR00815
high affinity sulphate transporter 1; The SulP family is a large and ubiquitous family with ...
96-717 0e+00

high affinity sulphate transporter 1; The SulP family is a large and ubiquitous family with over 30 sequenced members derived from bacteria, fungi, plants and animals. Many organisms including Bacillus subtilis, Synechocystis sp, Saccharomyces cerevisiae, Arabidopsis thaliana and Caenorhabditis elegans possess multiple SulP family paralogues. Many of these proteins are functionally characterized, and all are sulfate uptake transporters. Some transport their substrate with high affinities, while others transport it with relatively low affinities. Most function by SO42- :H+symport, but SO42- :HCO3- antiport has been reported for the rat protein (spP45380). The bacterial proteins vary in size from 434 residues to 566 residues with one exception, a Mycobacterium tuberculosis protein with 784 residues. The eukaryotic proteins vary in size from 611 residues to 893 residues with one exception, a protein designated "early nodulin 70 protein" from Glycine max which is reported to be of 485 residues. Thus, the eukaryotic proteins are almost without exception larger than the prokaryotic proteins. These proteins exhibit 10-13 putative transmembrane a-helical spanners (TMSs) depending on the protein. The phylogenetic tree for the SulP family reveals five principal branches. Three of these are bacterial specific as follows: one bears a single protein from M. tuberculosis; a second bears two proteins, one from M. tuberculosis, the other from Synechocystis sp, and the third bears all remaining prokaryotic proteins. The remaining two clusters bear only eukaryotic proteins with the animal proteins all localized to one branch and the plant and fungal proteins localized to the other. The generalized transport reactions catalyzed by SulP family proteins are: (1) SO42- (out) + nH+ (out) --> SO42- (in) + nH+ (in). (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out). [Transport and binding proteins, Anions]


Pssm-ID: 273284 [Multi-domain]  Cd Length: 552  Bit Score: 670.58  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814  96 PVLRWLPKYDLKKnILGDVMSGLIVGILLVPQSIAYSLLAGQEPIYGLYTSFFASIIYFLLGTSRHISVGIFGILCLMIG 175
Cdd:TIGR00815   1 PVLRWLRKYRLKK-FKGDLMAGLTVGILLIPQAIAYAKLAGLPPIYGLYTSFVPPIIYALFGSSRHIAIGPTASVSLLLG 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 176 EVVDRELHKAGYDtahtapslgmvsngstllnqtsdwicdrscYAIAVGSTVTFMAGVYQVAMGFFQVGFVSVYLSDALL 255
Cdd:TIGR00815  80 SLVQREGLQGLFD------------------------------DYIRLAFTATLLAGIFQVIMGLLRLGFLIEYLSHAVL 129
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 256 SGFVTGASFTILTSQAKYLLGLSL-PRSNGVGSLITTWIHIFRNihrtNICDLITSLLCLLVLLPTKELNEHFKSKLKAP 334
Cdd:TIGR00815 130 VGFTAGAAITIGLSQLKGLLGLSIfVKTDILGVVISTWASLHQN----NWCTLVIGLLFLLFLLATKELGKRNKKLLWAP 205
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 335 IPTELIVVVAATLASHFGkLHEKYNSSIAGHIPTG--FMPPKAPDWNLIPSLAVDAIAISIIGFAITVSLSEMFAKKHGY 412
Cdd:TIGR00815 206 APAPLLVVVLATLIVTIG-LHDSQGVSIVGHIPQGlsFFPPITFTWQHLPTLAPDAIAIAIVGLTESILTARVFAAMTGY 284
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 413 TVRANQEMYAIGFCNIIPSFFHCFTTSAALAKTLVKESTGCQTQLSAVVTALVLLLVLLVIAPLFYSLQKSVLGVITIVN 492
Cdd:TIGR00815 285 EIDANKELVALGIANIVGSFFSCYPATGSLSRTAVNYKAGCKTQLSAIVMAIVVLLVLLVLAPLFYYIPLAALAAIIISA 364
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 493 LRGaLRKFKDLPKMWKVSRMDTVIWFVTMLSSALISTEIGLLIGVCFSMFCVILRTQKPKISLLGWVEESEIFESMSAYK 572
Cdd:TIGR00815 365 AVG-LIDIRELYLLWKADKMDFVVWLGTFLGVVFTSIEIGLLVGVSLSAFFFILRVARPRAAVLGRIPGTEDYENIEQYP 443
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 573 NLQTKPGVKIFRFVAPLYYINKECFKSALYKKTLnpvlvkaaqkkaaktkitketvifsgiqdevslQLSHDPldlHTIV 652
Cdd:TIGR00815 444 KAQTPPGILIFRVDGPLYFANAEDLKERLLKWLE---------------------------------TLELDP---QIII 487
                         570       580       590       600       610       620
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2080271814 653 IDCSAIQFLDTAGIHTLKEVRRDYEAIGIQVLLAQCNPSVRDSLACGEYCKKEEENLLFYSVYEA 717
Cdd:TIGR00815 488 LDMSAVPFLDTSGIHALEELFKELKARGIQLLLANPNPAVISTLARAGFVELIGEEHFFPSVHDA 552
Sulfate_transp pfam00916
Sulfate permease family; This family of integral membrane proteins are known as the Sulfate ...
110-520 2.43e-134

Sulfate permease family; This family of integral membrane proteins are known as the Sulfate Permease (SulP) family. SulP is a large family found in all domains of life. Although sulfate is a commonly transported ion there are many other activities in this family. See the TCDB description for a comprehensive summary.


Pssm-ID: 459995 [Multi-domain]  Cd Length: 379  Bit Score: 402.01  E-value: 2.43e-134
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 110 ILGDVMSGLIVGILLVPQSIAYSLLAGQEPIYGLYTSFFASIIYFLLGTSRHISVGIFGILCLMIGEVVDRELHKagydt 189
Cdd:pfam00916   1 LKGDLIAGITVAILAIPQALAYAILAGLPPIYGLYSSFVPGFVYALFGTSRHLAIGPVAVLSLMVGAAIAKLAAK----- 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 190 ahtapslgmvsngstllnqtsdwicdRSCYAIAVGSTVTFMAGVYQVAMGFFQVGFVSVYLSDALLSGFVTGASFTILTS 269
Cdd:pfam00916  76 --------------------------DPELGIALAFTLTFLAGIIQLALGLLRLGFLVTFLSHAVISGFMGGAAIVILLS 129
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 270 QAKYLLGLSLprSNGVGSLITTWIHIFRNIHRTNICDLITSLLCLLVLLPTKELNEHFKSKLKAPIPTELIVVVAATLAS 349
Cdd:pfam00916 130 QLKVLLGLTN--FSGPGYVVSVLQSLFTNLDKVNLATLVLGLLVLVILLFTKELGKKYKKLFWIPAPAPLVAVVLATLVS 207
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 350 HFGKLHEKYNSSIAGHIPTGFMPPKAP--DWNLIPSLAVDAIAISIIGFAITVSLSEMFAKKHGYTVRANQEMYAIGFCN 427
Cdd:pfam00916 208 AIFDLLRRYGVKIVGEIPSGLPPFSLPkfSWSLLSALLPDALAIAIVGLLEAIAISKSFAKKKGYEVDSNQELVALGFAN 287
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 428 IIPSFFHCFTTSAALAKTLVKESTGCQTQLSAVVTALVLLLVLLVIAPLFYSLQKSVLGVITIVNLRGaLRKFKDLPKMW 507
Cdd:pfam00916 288 ILSGLFGGYPATGAFSRSAVNIKAGAKTPLSGIIMAVIVLLVLLFLTPLFAYIPKAVLAAIIIVAGKG-LIDYRELKHLW 366
                         410
                  ....*....|...
gi 2080271814 508 KVSRMDTVIWFVT 520
Cdd:pfam00916 367 RLSKLDFLIWLAT 379
SUL1 COG0659
Sulfate permease or related transporter, MFS superfamily [Inorganic ion transport and ...
107-726 5.14e-84

Sulfate permease or related transporter, MFS superfamily [Inorganic ion transport and metabolism];


Pssm-ID: 440424 [Multi-domain]  Cd Length: 529  Bit Score: 275.83  E-value: 5.14e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 107 KKNILGDVMSGLIVGILLVPQSIAYSLLAGQEPIYGLYTSFFASIIYFLLGTSRHISVGIFGILCLMIGEVVDrelhkag 186
Cdd:COG0659     4 RSNLRGDLLAGLTVALVALPLALAFAIAAGLPPEAGLYAAIVGGIVYALFGGSRLLISGPTAALAVVVAAAVA------- 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 187 ydtahtapSLGMVSngstllnqtsdwicdrscYAIAVgstvTFMAGVYQVAMGFFQVGFVSVYLSDALLSGFVTGASFTI 266
Cdd:COG0659    77 --------PLGSLA------------------LLLAA----TLLAGVLQLLLGLLRLGRLARFIPRPVIVGFLAGIAILI 126
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 267 LTSQAKYLLGLSLPRsngvGSLITTWIHIFRNIHRTNICDLITSLLCLLVLlptkelneHFKSKLKAPIPTELIVVVAAT 346
Cdd:COG0659   127 ILGQLPHLLGLPAPG----GSFLEKLAALLAALGEINPPTLALGLLTLAIL--------LLLPRLLKRIPGPLVAVVLGT 194
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 347 LASHFGKLHEKynssIAGHIPTGFMPPKAPDWNL--IPSLAVDAIAISIIGFAITVSLSEMFAKKHGYTVRANQEMYAIG 424
Cdd:COG0659   195 LLVWLLGLDVA----TVGEIPSGLPSFSLPDFSLetLRALLPPALTIALVGSIESLLTARAVDAMTGTRSDPNRELIAQG 270
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 425 FCNIIPSFFHCFTTSAALAKTLVKESTGCQTQLSAVVTALVLLLVLLVIAPLFYSLQKSVL-GVITIVNLRgaLRKFKDL 503
Cdd:COG0659   271 LANIASGLFGGLPVTGSISRSAVNVKAGARTRLSGIVHALFLLLVLLFLAPLLAYIPLAALaAILIVVGIG--LIDWRSF 348
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 504 PKMWKVSRMDTVIWFVTMLSSALISTEIGLLIGVCFSMFCVILRTQKPKISLLgwVEESEIFESMSAYKNLQTKPGVKIF 583
Cdd:COG0659   349 RRLWRAPRSDFLVMLVTFLVTVFTDLLIGVLVGVLLSLLLFLRRVSRPHVVVL--RVPGTHFRNVERHPEAETGPGVLVY 426
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 584 RFVAPLYYINKECFKSALykktlnpvlvkaaqkkaaktkitketvifsgiqdevsLQLSHDPldlHTIVIDCSAIQFLDT 663
Cdd:COG0659   427 RLDGPLFFGNAERLKERL-------------------------------------DALAPDP---RVVILDLSAVPFIDA 466
                         570       580       590       600       610       620
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2080271814 664 AGIHTLKEVRRDYEAIGIQVLLAQCNPSVRDSLACGEYCKKEEENLLFYSVYEAMAFAEEYQN 726
Cdd:COG0659   467 TALEALEELAERLRARGITLELAGLKPPVRDLLERAGLLDELGEERVFPDLDEALEAAEERAE 529
STAS cd06844
Sulphate Transporter and Anti-Sigma factor antagonist domain found in the C-terminal region of ...
572-709 2.99e-35

Sulphate Transporter and Anti-Sigma factor antagonist domain found in the C-terminal region of sulphate transporters as well as in bacterial and archaeal proteins involved in the regulation of sigma factors; The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain is found in the C-terminal region of sulphate transporters as well as in bacterial and archaeal proteins involved in the regulation of sigma factors, like anti-anti-sigma factors and "stressosome" components. The sigma factor regulators are involved in protein-protein interaction which is regulated by phosphorylation.


Pssm-ID: 132911 [Multi-domain]  Cd Length: 100  Bit Score: 128.75  E-value: 2.99e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 572 KNLQTKPGVKIFRFVAPLYYINKECFKSALYKKTLNPVLvkaaqkkaaktkitketvifsgiqdevslqlshdpldlHTI 651
Cdd:cd06844     1 VPLEKVDDYWVVRLEGELDHHSVEQFKEELLHNITNVAG--------------------------------------KTI 42
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2080271814 652 VIDCSAIQFLDTAGIHTLKEVRRDYEAIGIQVLLAQCNPSVRDSLACGEYCKKEEENL 709
Cdd:cd06844    43 VIDISALEFMDSSGTGVLLERSRLAEAVGGQFVLTGISPAVRITLTESGLDKG*ATAL 100
PRK11660 PRK11660
putative transporter; Provisional
88-445 3.19e-15

putative transporter; Provisional


Pssm-ID: 183265 [Multi-domain]  Cd Length: 568  Bit Score: 79.22  E-value: 3.19e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814  88 KNVIFGFLP--VLR---WLPKYDLKKnILGDVMSGLIVGILLVPQSIAYSLLAGQEPIYGLYTSFFASIIYFLLGTSRH- 161
Cdd:PRK11660    3 KAHLFSVRPfsALIdacWKEKYTAAR-FTRDLIAGITVGIIAIPLAMALAIASGVPPQYGLYTAAVAGIVIALTGGSRFs 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 162 IS--VGIFGILCLMIgevvdrelhkagydtahtAPSLGMvsngSTLLnqtsdwicdrscyaIAvgstvTFMAGVYQVAMG 239
Cdd:PRK11660   82 VSgpTAAFVVILYPV------------------SQQFGL----AGLL--------------VA-----TLMSGIILILMG 120
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 240 FFQVGFVSVYLSDALLSGFVTGASFTILTSQAKYLLGLSLPR--SNGVGSLITtwihIFRNIHRTNICDLITSLLCLLVL 317
Cdd:PRK11660  121 LARLGRLIEYIPLSVTLGFTSGIGIVIATLQIKDFFGLQMAHvpEHYLEKVGA----LFQALPTINWGDALIGIVTLGVL 196
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 318 LptkelnehFKSKLKAPIPTELIVVVAATLAS----HFG--------KLHEKYNSSIAGH-IPTgFMP------------ 372
Cdd:PRK11660  197 I--------LWPRLKIRLPGHLPALLAGTAVMgvlnLLGghvatigsRFHYVLADGSQGNgIPP-LLPqfvlpwnlpgad 267
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 373 --PKAPDWNLIPSLAVDAIAISIIGfAI-----TVSLSEMFAKKHgytvRANQEMYAIGFCNIIPSFFHCFTTSAALAKT 445
Cdd:PRK11660  268 gqPFTLSWDLIRALLPAAFSMAMLG-AIesllcAVVLDGMTGTKH----SANSELVGQGLGNIVAPFFGGITATAAIARS 342
 
Name Accession Description Interval E-value
sulP TIGR00815
high affinity sulphate transporter 1; The SulP family is a large and ubiquitous family with ...
96-717 0e+00

high affinity sulphate transporter 1; The SulP family is a large and ubiquitous family with over 30 sequenced members derived from bacteria, fungi, plants and animals. Many organisms including Bacillus subtilis, Synechocystis sp, Saccharomyces cerevisiae, Arabidopsis thaliana and Caenorhabditis elegans possess multiple SulP family paralogues. Many of these proteins are functionally characterized, and all are sulfate uptake transporters. Some transport their substrate with high affinities, while others transport it with relatively low affinities. Most function by SO42- :H+symport, but SO42- :HCO3- antiport has been reported for the rat protein (spP45380). The bacterial proteins vary in size from 434 residues to 566 residues with one exception, a Mycobacterium tuberculosis protein with 784 residues. The eukaryotic proteins vary in size from 611 residues to 893 residues with one exception, a protein designated "early nodulin 70 protein" from Glycine max which is reported to be of 485 residues. Thus, the eukaryotic proteins are almost without exception larger than the prokaryotic proteins. These proteins exhibit 10-13 putative transmembrane a-helical spanners (TMSs) depending on the protein. The phylogenetic tree for the SulP family reveals five principal branches. Three of these are bacterial specific as follows: one bears a single protein from M. tuberculosis; a second bears two proteins, one from M. tuberculosis, the other from Synechocystis sp, and the third bears all remaining prokaryotic proteins. The remaining two clusters bear only eukaryotic proteins with the animal proteins all localized to one branch and the plant and fungal proteins localized to the other. The generalized transport reactions catalyzed by SulP family proteins are: (1) SO42- (out) + nH+ (out) --> SO42- (in) + nH+ (in). (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out). [Transport and binding proteins, Anions]


Pssm-ID: 273284 [Multi-domain]  Cd Length: 552  Bit Score: 670.58  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814  96 PVLRWLPKYDLKKnILGDVMSGLIVGILLVPQSIAYSLLAGQEPIYGLYTSFFASIIYFLLGTSRHISVGIFGILCLMIG 175
Cdd:TIGR00815   1 PVLRWLRKYRLKK-FKGDLMAGLTVGILLIPQAIAYAKLAGLPPIYGLYTSFVPPIIYALFGSSRHIAIGPTASVSLLLG 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 176 EVVDRELHKAGYDtahtapslgmvsngstllnqtsdwicdrscYAIAVGSTVTFMAGVYQVAMGFFQVGFVSVYLSDALL 255
Cdd:TIGR00815  80 SLVQREGLQGLFD------------------------------DYIRLAFTATLLAGIFQVIMGLLRLGFLIEYLSHAVL 129
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 256 SGFVTGASFTILTSQAKYLLGLSL-PRSNGVGSLITTWIHIFRNihrtNICDLITSLLCLLVLLPTKELNEHFKSKLKAP 334
Cdd:TIGR00815 130 VGFTAGAAITIGLSQLKGLLGLSIfVKTDILGVVISTWASLHQN----NWCTLVIGLLFLLFLLATKELGKRNKKLLWAP 205
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 335 IPTELIVVVAATLASHFGkLHEKYNSSIAGHIPTG--FMPPKAPDWNLIPSLAVDAIAISIIGFAITVSLSEMFAKKHGY 412
Cdd:TIGR00815 206 APAPLLVVVLATLIVTIG-LHDSQGVSIVGHIPQGlsFFPPITFTWQHLPTLAPDAIAIAIVGLTESILTARVFAAMTGY 284
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 413 TVRANQEMYAIGFCNIIPSFFHCFTTSAALAKTLVKESTGCQTQLSAVVTALVLLLVLLVIAPLFYSLQKSVLGVITIVN 492
Cdd:TIGR00815 285 EIDANKELVALGIANIVGSFFSCYPATGSLSRTAVNYKAGCKTQLSAIVMAIVVLLVLLVLAPLFYYIPLAALAAIIISA 364
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 493 LRGaLRKFKDLPKMWKVSRMDTVIWFVTMLSSALISTEIGLLIGVCFSMFCVILRTQKPKISLLGWVEESEIFESMSAYK 572
Cdd:TIGR00815 365 AVG-LIDIRELYLLWKADKMDFVVWLGTFLGVVFTSIEIGLLVGVSLSAFFFILRVARPRAAVLGRIPGTEDYENIEQYP 443
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 573 NLQTKPGVKIFRFVAPLYYINKECFKSALYKKTLnpvlvkaaqkkaaktkitketvifsgiqdevslQLSHDPldlHTIV 652
Cdd:TIGR00815 444 KAQTPPGILIFRVDGPLYFANAEDLKERLLKWLE---------------------------------TLELDP---QIII 487
                         570       580       590       600       610       620
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2080271814 653 IDCSAIQFLDTAGIHTLKEVRRDYEAIGIQVLLAQCNPSVRDSLACGEYCKKEEENLLFYSVYEA 717
Cdd:TIGR00815 488 LDMSAVPFLDTSGIHALEELFKELKARGIQLLLANPNPAVISTLARAGFVELIGEEHFFPSVHDA 552
Sulfate_transp pfam00916
Sulfate permease family; This family of integral membrane proteins are known as the Sulfate ...
110-520 2.43e-134

Sulfate permease family; This family of integral membrane proteins are known as the Sulfate Permease (SulP) family. SulP is a large family found in all domains of life. Although sulfate is a commonly transported ion there are many other activities in this family. See the TCDB description for a comprehensive summary.


Pssm-ID: 459995 [Multi-domain]  Cd Length: 379  Bit Score: 402.01  E-value: 2.43e-134
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 110 ILGDVMSGLIVGILLVPQSIAYSLLAGQEPIYGLYTSFFASIIYFLLGTSRHISVGIFGILCLMIGEVVDRELHKagydt 189
Cdd:pfam00916   1 LKGDLIAGITVAILAIPQALAYAILAGLPPIYGLYSSFVPGFVYALFGTSRHLAIGPVAVLSLMVGAAIAKLAAK----- 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 190 ahtapslgmvsngstllnqtsdwicdRSCYAIAVGSTVTFMAGVYQVAMGFFQVGFVSVYLSDALLSGFVTGASFTILTS 269
Cdd:pfam00916  76 --------------------------DPELGIALAFTLTFLAGIIQLALGLLRLGFLVTFLSHAVISGFMGGAAIVILLS 129
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 270 QAKYLLGLSLprSNGVGSLITTWIHIFRNIHRTNICDLITSLLCLLVLLPTKELNEHFKSKLKAPIPTELIVVVAATLAS 349
Cdd:pfam00916 130 QLKVLLGLTN--FSGPGYVVSVLQSLFTNLDKVNLATLVLGLLVLVILLFTKELGKKYKKLFWIPAPAPLVAVVLATLVS 207
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 350 HFGKLHEKYNSSIAGHIPTGFMPPKAP--DWNLIPSLAVDAIAISIIGFAITVSLSEMFAKKHGYTVRANQEMYAIGFCN 427
Cdd:pfam00916 208 AIFDLLRRYGVKIVGEIPSGLPPFSLPkfSWSLLSALLPDALAIAIVGLLEAIAISKSFAKKKGYEVDSNQELVALGFAN 287
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 428 IIPSFFHCFTTSAALAKTLVKESTGCQTQLSAVVTALVLLLVLLVIAPLFYSLQKSVLGVITIVNLRGaLRKFKDLPKMW 507
Cdd:pfam00916 288 ILSGLFGGYPATGAFSRSAVNIKAGAKTPLSGIIMAVIVLLVLLFLTPLFAYIPKAVLAAIIIVAGKG-LIDYRELKHLW 366
                         410
                  ....*....|...
gi 2080271814 508 KVSRMDTVIWFVT 520
Cdd:pfam00916 367 RLSKLDFLIWLAT 379
SUL1 COG0659
Sulfate permease or related transporter, MFS superfamily [Inorganic ion transport and ...
107-726 5.14e-84

Sulfate permease or related transporter, MFS superfamily [Inorganic ion transport and metabolism];


Pssm-ID: 440424 [Multi-domain]  Cd Length: 529  Bit Score: 275.83  E-value: 5.14e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 107 KKNILGDVMSGLIVGILLVPQSIAYSLLAGQEPIYGLYTSFFASIIYFLLGTSRHISVGIFGILCLMIGEVVDrelhkag 186
Cdd:COG0659     4 RSNLRGDLLAGLTVALVALPLALAFAIAAGLPPEAGLYAAIVGGIVYALFGGSRLLISGPTAALAVVVAAAVA------- 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 187 ydtahtapSLGMVSngstllnqtsdwicdrscYAIAVgstvTFMAGVYQVAMGFFQVGFVSVYLSDALLSGFVTGASFTI 266
Cdd:COG0659    77 --------PLGSLA------------------LLLAA----TLLAGVLQLLLGLLRLGRLARFIPRPVIVGFLAGIAILI 126
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 267 LTSQAKYLLGLSLPRsngvGSLITTWIHIFRNIHRTNICDLITSLLCLLVLlptkelneHFKSKLKAPIPTELIVVVAAT 346
Cdd:COG0659   127 ILGQLPHLLGLPAPG----GSFLEKLAALLAALGEINPPTLALGLLTLAIL--------LLLPRLLKRIPGPLVAVVLGT 194
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 347 LASHFGKLHEKynssIAGHIPTGFMPPKAPDWNL--IPSLAVDAIAISIIGFAITVSLSEMFAKKHGYTVRANQEMYAIG 424
Cdd:COG0659   195 LLVWLLGLDVA----TVGEIPSGLPSFSLPDFSLetLRALLPPALTIALVGSIESLLTARAVDAMTGTRSDPNRELIAQG 270
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 425 FCNIIPSFFHCFTTSAALAKTLVKESTGCQTQLSAVVTALVLLLVLLVIAPLFYSLQKSVL-GVITIVNLRgaLRKFKDL 503
Cdd:COG0659   271 LANIASGLFGGLPVTGSISRSAVNVKAGARTRLSGIVHALFLLLVLLFLAPLLAYIPLAALaAILIVVGIG--LIDWRSF 348
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 504 PKMWKVSRMDTVIWFVTMLSSALISTEIGLLIGVCFSMFCVILRTQKPKISLLgwVEESEIFESMSAYKNLQTKPGVKIF 583
Cdd:COG0659   349 RRLWRAPRSDFLVMLVTFLVTVFTDLLIGVLVGVLLSLLLFLRRVSRPHVVVL--RVPGTHFRNVERHPEAETGPGVLVY 426
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 584 RFVAPLYYINKECFKSALykktlnpvlvkaaqkkaaktkitketvifsgiqdevsLQLSHDPldlHTIVIDCSAIQFLDT 663
Cdd:COG0659   427 RLDGPLFFGNAERLKERL-------------------------------------DALAPDP---RVVILDLSAVPFIDA 466
                         570       580       590       600       610       620
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2080271814 664 AGIHTLKEVRRDYEAIGIQVLLAQCNPSVRDSLACGEYCKKEEENLLFYSVYEAMAFAEEYQN 726
Cdd:COG0659   467 TALEALEELAERLRARGITLELAGLKPPVRDLLERAGLLDELGEERVFPDLDEALEAAEERAE 529
STAS cd06844
Sulphate Transporter and Anti-Sigma factor antagonist domain found in the C-terminal region of ...
572-709 2.99e-35

Sulphate Transporter and Anti-Sigma factor antagonist domain found in the C-terminal region of sulphate transporters as well as in bacterial and archaeal proteins involved in the regulation of sigma factors; The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain is found in the C-terminal region of sulphate transporters as well as in bacterial and archaeal proteins involved in the regulation of sigma factors, like anti-anti-sigma factors and "stressosome" components. The sigma factor regulators are involved in protein-protein interaction which is regulated by phosphorylation.


Pssm-ID: 132911 [Multi-domain]  Cd Length: 100  Bit Score: 128.75  E-value: 2.99e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 572 KNLQTKPGVKIFRFVAPLYYINKECFKSALYKKTLNPVLvkaaqkkaaktkitketvifsgiqdevslqlshdpldlHTI 651
Cdd:cd06844     1 VPLEKVDDYWVVRLEGELDHHSVEQFKEELLHNITNVAG--------------------------------------KTI 42
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2080271814 652 VIDCSAIQFLDTAGIHTLKEVRRDYEAIGIQVLLAQCNPSVRDSLACGEYCKKEEENL 709
Cdd:cd06844    43 VIDISALEFMDSSGTGVLLERSRLAEAVGGQFVLTGISPAVRITLTESGLDKG*ATAL 100
STAS_SulP_like_sulfate_transporter cd07042
Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters, ...
571-714 4.46e-20

Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters, plays a role in the function and regulation of the transport activity, proposed general NTP binding function; The SulP family is a large and diverse family of anion transporters, with members from eubacteria, plants, fungi, and mammals. They contain 10 to 14 transmembrane helices which form the catalytic core of the protein and a C-terminal extension, the STAS (Sulphate Transporter and AntiSigma factor antagonist) domain which plays a role in the function and regulation of the transport activity. The STAS domain is found in the C-terminal region of sulphate transporters and bacterial anti-sigma factor antagonists. It has been suggested that this domain may have a general NTP binding function.


Pssm-ID: 132913 [Multi-domain]  Cd Length: 107  Bit Score: 85.76  E-value: 4.46e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 571 YKNLQTKPGVKIFRFVAPLYYINKECFKSALykktlnpvlvkaaqkkaaktkitketvifsgiqdevsLQLSHDPLDLHT 650
Cdd:cd07042     1 YPLAEEPPGVLIYRIDGPLFFGNAEYFKDRL-------------------------------------LRLVDEDPPLKV 43
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2080271814 651 IVIDCSAIQFLDTAGIHTLKEVRRDYEAIGIQVLLAQCNPSVRDSLACGEYCKKEEENLLFYSV 714
Cdd:cd07042    44 VILDLSAVNFIDSTAAEALEELVKDLRKRGVELYLAGLNPQVRELLERAGLLDEIGEENFFPTL 107
STAS pfam01740
STAS domain; The STAS (after Sulphate Transporter and AntiSigma factor antagonist) domain is ...
571-717 3.15e-17

STAS domain; The STAS (after Sulphate Transporter and AntiSigma factor antagonist) domain is found in the C terminal region of Sulphate transporters and bacterial antisigma factor antagonists. It has been suggested that this domain may have a general NTP binding function.


Pssm-ID: 426404 [Multi-domain]  Cd Length: 106  Bit Score: 77.65  E-value: 3.15e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 571 YKNLQTKPGVKIFRFVAPLYYINKECFKSALYKKTLNPvlvkaaqkkaaktkitketvifsgiqdevslqlshdplDLHT 650
Cdd:pfam01740   1 YPEAEEIPGILILRLDGPLDFANAESLRERLLRALEEG--------------------------------------EIKH 42
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2080271814 651 IVIDCSAIQFLDTAGIHTLKEVRRDYEAIGIQVLLAQCNPSVRDSLacgEYCKKEEENLLFYSVYEA 717
Cdd:pfam01740  43 VVLDLSAVPFIDSSGLGALEELYKELRRRGVELVLVGPSPEVARTL---EKTGLDDIIKIFPTVAEA 106
PRK11660 PRK11660
putative transporter; Provisional
88-445 3.19e-15

putative transporter; Provisional


Pssm-ID: 183265 [Multi-domain]  Cd Length: 568  Bit Score: 79.22  E-value: 3.19e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814  88 KNVIFGFLP--VLR---WLPKYDLKKnILGDVMSGLIVGILLVPQSIAYSLLAGQEPIYGLYTSFFASIIYFLLGTSRH- 161
Cdd:PRK11660    3 KAHLFSVRPfsALIdacWKEKYTAAR-FTRDLIAGITVGIIAIPLAMALAIASGVPPQYGLYTAAVAGIVIALTGGSRFs 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 162 IS--VGIFGILCLMIgevvdrelhkagydtahtAPSLGMvsngSTLLnqtsdwicdrscyaIAvgstvTFMAGVYQVAMG 239
Cdd:PRK11660   82 VSgpTAAFVVILYPV------------------SQQFGL----AGLL--------------VA-----TLMSGIILILMG 120
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 240 FFQVGFVSVYLSDALLSGFVTGASFTILTSQAKYLLGLSLPR--SNGVGSLITtwihIFRNIHRTNICDLITSLLCLLVL 317
Cdd:PRK11660  121 LARLGRLIEYIPLSVTLGFTSGIGIVIATLQIKDFFGLQMAHvpEHYLEKVGA----LFQALPTINWGDALIGIVTLGVL 196
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 318 LptkelnehFKSKLKAPIPTELIVVVAATLAS----HFG--------KLHEKYNSSIAGH-IPTgFMP------------ 372
Cdd:PRK11660  197 I--------LWPRLKIRLPGHLPALLAGTAVMgvlnLLGghvatigsRFHYVLADGSQGNgIPP-LLPqfvlpwnlpgad 267
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080271814 373 --PKAPDWNLIPSLAVDAIAISIIGfAI-----TVSLSEMFAKKHgytvRANQEMYAIGFCNIIPSFFHCFTTSAALAKT 445
Cdd:PRK11660  268 gqPFTLSWDLIRALLPAAFSMAMLG-AIesllcAVVLDGMTGTKH----SANSELVGQGLGNIVAPFFGGITATAAIARS 342
SpoIIAA COG1366
Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Signal transduction ...
649-696 2.44e-05

Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Signal transduction mechanisms];


Pssm-ID: 440977 [Multi-domain]  Cd Length: 93  Bit Score: 43.30  E-value: 2.44e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*...
gi 2080271814 649 HTIVIDCSAIQFLDTAGIHTLKEVRRDYEAIGIQVLLAQCNPSVRDSL 696
Cdd:COG1366    40 RRVVLDLSGVTFIDSSGLGALLSLAKAARLLGGRLVLVGVSPAVARVL 87
STAS_anti-anti-sigma_factors cd07043
Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key ...
649-694 1.39e-04

Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation; Anti-anti-sigma factors play an important role in the regulation of several sigma factors and their corresponding anti-sigma factors. Upon dephosphorylation they bind the anti-sigma factor and induce the release of the sigma factor from the anti-sigma factor. In a feedback mechanism the anti-anti-sigma factor can be inactivated via phosphorylation by the anti-sigma factor. Well studied examples from Bacillus subtilis are SpoIIAA (regulating sigmaF and sigmaC which play an important role in sporulation) and RsbV (regulating sigmaB involved in the general stress response). The STAS domain is also found in the C- terminal region of sulphate transporters and stressosomes.


Pssm-ID: 132914 [Multi-domain]  Cd Length: 99  Bit Score: 41.35  E-value: 1.39e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 2080271814 649 HTIVIDCSAIQFLDTAGIHTLKEVRRDYEAIGIQVLLAQCNPSVRD 694
Cdd:cd07043    39 RRLVLDLSGVTFIDSSGLGVLLGAYKRARAAGGRLVLVNVSPAVRR 84
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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