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Conserved domains on  [gi|2047244344|ref|XP_041717969|]
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dnaJ homolog subfamily B member 6 isoform X2 [Coregonus clupeaformis]

Protein Classification

molecular chaperone DnaJ( domain architecture ID 1000952)

molecular chaperone DnaJ, part of the DnaK-DnaJ-GrpE system, prevents the aggregation of unfolded substrate and acts primarily by stimulating the ATPase activity of Hsp70

CATH:  2.10.230.10
Gene Ontology:  GO:0051082|GO:0005524|GO:0009408|GO:0006457
PubMed:  8016869|15063739|29290615
SCOP:  4003813|4002149

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK10767 super family cl35946
chaperone protein DnaJ; Provisional
 4-136 8.58e-44

chaperone protein DnaJ; Provisional


The actual alignment was detected with superfamily member PRK10767:

Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 153.76  E-value: 8.58e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047244344   4 YYQILGVQRNASAEDIKKAYRKLALKWHPDKNPENQEdAERRFKEISEAYEVLSDANKRNLYDQYGkegltgsggggggh 83
Cdd:PRK10767    6 YYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKE-AEEKFKEIKEAYEVLSDPQKRAAYDQYG-------------- 70

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2047244344  84 yHNA-DHFGGGftfrnpedvfrEFFGGRDPFADFFAD--DNFFGGGQRQRGVSQSR 136
Cdd:PRK10767   71 -HAAfEQGGGG-----------GGFGGGGGFGDIFGDifGDIFGGGRGGGRQRARR 114
 
Name Accession Description Interval E-value
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 4-136 8.58e-44

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 153.76  E-value: 8.58e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047244344   4 YYQILGVQRNASAEDIKKAYRKLALKWHPDKNPENQEdAERRFKEISEAYEVLSDANKRNLYDQYGkegltgsggggggh 83
Cdd:PRK10767    6 YYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKE-AEEKFKEIKEAYEVLSDPQKRAAYDQYG-------------- 70

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2047244344  84 yHNA-DHFGGGftfrnpedvfrEFFGGRDPFADFFAD--DNFFGGGQRQRGVSQSR 136
Cdd:PRK10767   71 -HAAfEQGGGG-----------GGFGGGGGFGDIFGDifGDIFGGGRGGGRQRARR 114
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 4-130 4.64e-42

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 148.52  E-value: 4.64e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047244344   4 YYQILGVQRNASAEDIKKAYRKLALKWHPDKNPEnqEDAERRFKEISEAYEVLSDANKRNLYDQYGKEGLtgsggggggh 83
Cdd:TIGR02349   2 YYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD--KEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGF---------- 69

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 2047244344  84 yhNADHFGGGFTFRNPEDVFREFFGgrDPFADFFADDNFFGGGQRQR 130
Cdd:TIGR02349  70 --NGGGGGGGGGFNGFDIGFFGDFG--DIFGDFFGGGGGSGRRRRSG 112
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 3-66 4.17e-34

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 119.11  E-value: 4.17e-34
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2047244344   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPENQEdAERRFKEISEAYEVLSDANKRNLYD 66
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDPE-AEEKFKEINEAYEVLSDPEKRAIYD 63
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 4-69 2.15e-32

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 117.11  E-value: 2.15e-32
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2047244344   4 YYQILGVQRNASAEDIKKAYRKLALKWHPDKNPeNQEDAERRFKEISEAYEVLSDANKRNLYDQYG 69
Cdd:COG0484     2 YYEILGVSRDASAEEIKKAYRKLAKKYHPDRNP-GDPEAEEKFKEINEAYEVLSDPEKRAAYDRFG 66
DnaJ smart00271
DnaJ molecular chaperone homology domain;
2-61 5.99e-30

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 108.09  E-value: 5.99e-30
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047244344    2 TEYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPENQEDAERRFKEISEAYEVLSDANK 61
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 3-58 3.63e-27

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 100.70  E-value: 3.63e-27
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2047244344   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPENqEDAERRFKEISEAYEVLSD 58
Cdd:cd06257     1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDD-PEAEEKFKEINEAYEVLSD 55
 
Name Accession Description Interval E-value
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 4-136 8.58e-44

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 153.76  E-value: 8.58e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047244344   4 YYQILGVQRNASAEDIKKAYRKLALKWHPDKNPENQEdAERRFKEISEAYEVLSDANKRNLYDQYGkegltgsggggggh 83
Cdd:PRK10767    6 YYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKE-AEEKFKEIKEAYEVLSDPQKRAAYDQYG-------------- 70

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2047244344  84 yHNA-DHFGGGftfrnpedvfrEFFGGRDPFADFFAD--DNFFGGGQRQRGVSQSR 136
Cdd:PRK10767   71 -HAAfEQGGGG-----------GGFGGGGGFGDIFGDifGDIFGGGRGGGRQRARR 114
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 4-130 4.64e-42

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 148.52  E-value: 4.64e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047244344   4 YYQILGVQRNASAEDIKKAYRKLALKWHPDKNPEnqEDAERRFKEISEAYEVLSDANKRNLYDQYGKEGLtgsggggggh 83
Cdd:TIGR02349   2 YYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD--KEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGF---------- 69

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 2047244344  84 yhNADHFGGGFTFRNPEDVFREFFGgrDPFADFFADDNFFGGGQRQR 130
Cdd:TIGR02349  70 --NGGGGGGGGGFNGFDIGFFGDFG--DIFGDFFGGGGGSGRRRRSG 112
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 3-66 4.17e-34

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 119.11  E-value: 4.17e-34
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2047244344   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPENQEdAERRFKEISEAYEVLSDANKRNLYD 66
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDPE-AEEKFKEINEAYEVLSDPEKRAIYD 63
PRK14280 PRK14280
molecular chaperone DnaJ;
3-114 6.81e-34

molecular chaperone DnaJ;


Pssm-ID: 237656 [Multi-domain]  Cd Length: 376  Bit Score: 127.53  E-value: 6.81e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047244344   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPEnqEDAERRFKEISEAYEVLSDANKRNLYDQYGKEGLTGSGGGGGG 82
Cdd:PRK14280    5 DYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKE--EGADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPNQGFGGGGF 82

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 2047244344  83 hyhNADHFGGGFTFrnpEDVFREFFGG----RDPFA 114
Cdd:PRK14280   83 ---GGGDFGGGFGF---EDIFSSFFGGggrrRDPNA 112
PRK14294 PRK14294
chaperone protein DnaJ; Provisional
 4-136 1.43e-33

chaperone protein DnaJ; Provisional


Pssm-ID: 237664 [Multi-domain]  Cd Length: 366  Bit Score: 126.42  E-value: 1.43e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047244344   4 YYQILGVQRNASAEDIKKAYRKLALKWHPDKNPENQEdAERRFKEISEAYEVLSDANKRNLYDQYGKEGLTgsggggggh 83
Cdd:PRK14294    6 YYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKE-AEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLS--------- 75

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 2047244344  84 yhnadhfGGGFT-FRNPEDVFREFfggRDPFADFFAddnfFGGGQRQRGVSQSR 136
Cdd:PRK14294   76 -------GTGFSgFSGFDDIFSSF---GDIFEDFFG----FGGGRRGRSRTAVR 115
PRK14284 PRK14284
chaperone protein DnaJ; Provisional
 2-125 8.73e-33

chaperone protein DnaJ; Provisional


Pssm-ID: 237658 [Multi-domain]  Cd Length: 391  Bit Score: 124.96  E-value: 8.73e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047244344   2 TEYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPENQEdAERRFKEISEAYEVLSDANKRNLYDQYGKEGLtgsggggg 81
Cdd:PRK14284    1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAE-AEKRFKEVSEAYEVLSDAQKRESYDRYGKDGP-------- 71

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 2047244344  82 ghYHNADHFGGGfTFRNPEDVFREF-------FGGRDPFADFfaddnFFGG 125
Cdd:PRK14284   72 --FAGAGGFGGA-GMGNMEDALRTFmgafggeFGGGGSFFEG-----LFGG 114
PRK14298 PRK14298
chaperone protein DnaJ; Provisional
 3-136 1.10e-32

chaperone protein DnaJ; Provisional


Pssm-ID: 184612 [Multi-domain]  Cd Length: 377  Bit Score: 124.19  E-value: 1.10e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047244344   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPEnqEDAERRFKEISEAYEVLSDANKRNLYDQYGkegltgsgggggg 82
Cdd:PRK14298    6 DYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKE--PDAEEKFKEISEAYAVLSDAEKRAQYDRFG------------- 70

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2047244344  83 hyhnadHFG--GGFTfrnPEDVFREF-FGGrdpFADFFadDNFFGGGQRQRGVSQSR 136
Cdd:PRK14298   71 ------HAGidNQYS---AEDIFRGAdFGG---FGDIF--EMFFGGGGRRGRMGPRR 113
PRK14290 PRK14290
chaperone protein DnaJ; Provisional
 3-130 1.49e-32

chaperone protein DnaJ; Provisional


Pssm-ID: 172778 [Multi-domain]  Cd Length: 365  Bit Score: 123.89  E-value: 1.49e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047244344   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPENQEDAERRFKEISEAYEVLSDANKRNLYDQYGkegltgsgggggg 82
Cdd:PRK14290    4 DYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTG------------- 70

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2047244344  83 hyhNADHFGGG-------FT-FRNPEDVFREFFGGRdpfadfFADDNFFGGGQRQR 130
Cdd:PRK14290   71 ---TVDFGAGGsnfnwdnFThFSDINDIFNQIFGGN------FGSDFFSGFGNQQS 117
PRK14291 PRK14291
chaperone protein DnaJ; Provisional
 3-130 1.61e-32

chaperone protein DnaJ; Provisional


Pssm-ID: 237661 [Multi-domain]  Cd Length: 382  Bit Score: 124.11  E-value: 1.61e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047244344   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPEnqEDAERRFKEISEAYEVLSDANKRNLYDQYGKEGLTGSGGGGGG 82
Cdd:PRK14291    4 DYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKN--PEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSGQQQQG 81

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 2047244344  83 HYHNADHFGGgftfrNPEDVFREFFGGRDpFADFFADDNFFGGGQRQR 130
Cdd:PRK14291   82 QEGFSDFGGG-----NIEDILEDVFDIFG-FGDIFGRRRATRERRKTY 123
PRK14282 PRK14282
chaperone protein DnaJ; Provisional
 3-130 1.77e-32

chaperone protein DnaJ; Provisional


Pssm-ID: 184603 [Multi-domain]  Cd Length: 369  Bit Score: 123.75  E-value: 1.77e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047244344   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPENQEDAERRFKEISEAYEVLSDANKRNLYDQYGkegltgsgGGGGG 82
Cdd:PRK14282    5 DYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFG--------YVGEQ 76

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 2047244344  83 HYHNADHFGGGFTfrnpEDVFREF--FGGRDPFADFFADDnffGGGQRQR 130
Cdd:PRK14282   77 PPYQETESGGGFF----EDIFKDFenIFNRDIFDIFFGER---RTQEEQR 119
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 4-69 2.15e-32

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 117.11  E-value: 2.15e-32
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2047244344   4 YYQILGVQRNASAEDIKKAYRKLALKWHPDKNPeNQEDAERRFKEISEAYEVLSDANKRNLYDQYG 69
Cdd:COG0484     2 YYEILGVSRDASAEEIKKAYRKLAKKYHPDRNP-GDPEAEEKFKEINEAYEVLSDPEKRAAYDRFG 66
PRK14301 PRK14301
chaperone protein DnaJ; Provisional
 3-131 3.83e-32

chaperone protein DnaJ; Provisional


Pssm-ID: 237668 [Multi-domain]  Cd Length: 373  Bit Score: 122.54  E-value: 3.83e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047244344   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPENQEdAERRFKEISEAYEVLSDANKRNLYDQYGKEGLtgsgggggg 82
Cdd:PRK14301    5 DYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPE-AEQKFKEAAEAYEVLRDAEKRARYDRFGHAGV--------- 74

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 2047244344  83 hyhNADHFGGGFTfrNPEDVFREFfggRDPFADFFAddnfFGGGQRQRG 131
Cdd:PRK14301   75 ---NGNGGFGGFS--SAEDIFSHF---SDIFGDLFG----FSGGGSRRG 111
PRK14281 PRK14281
chaperone protein DnaJ; Provisional
 3-130 5.31e-32

chaperone protein DnaJ; Provisional


Pssm-ID: 237657 [Multi-domain]  Cd Length: 397  Bit Score: 122.99  E-value: 5.31e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047244344   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPENQEdAERRFKEISEAYEVLSDANKRNLYDQYGKEGLTGSGGGGGg 82
Cdd:PRK14281    4 DYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKE-AEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAASGG- 81

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 2047244344  83 hyhNADHFGGGFTFRNPEDVFREFFGG---RDPFADFFADDNFFGGGQRQR 130
Cdd:PRK14281   82 ---GPGYGGGGGDFNDIFSAFNDMFGGgarRGGGSPFGFEDVFGGGGRRRR 129
PRK14277 PRK14277
chaperone protein DnaJ; Provisional
 3-130 2.92e-31

chaperone protein DnaJ; Provisional


Pssm-ID: 184599 [Multi-domain]  Cd Length: 386  Bit Score: 120.68  E-value: 2.92e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047244344   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPENQEdAERRFKEISEAYEVLSDANKRNLYDQYGKEGLTGSGggggg 82
Cdd:PRK14277    6 DYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKE-AEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPGG----- 79

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 2047244344  83 hYHNADHFGGGFTfrnpeDVFREF-FGG-RDPFADFFADdnFFGGGQRQR 130
Cdd:PRK14277   80 -FGQGGFGQGGFG-----GGGFDFdFGGfGDIFEDIFGD--FFGTGRRRA 121
PRK14289 PRK14289
molecular chaperone DnaJ;
3-132 7.86e-31

molecular chaperone DnaJ;


Pssm-ID: 237660 [Multi-domain]  Cd Length: 386  Bit Score: 119.55  E-value: 7.86e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047244344   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPENQEdAERRFKEISEAYEVLSDANKRNLYDQYGKEGLTGSGGgggg 82
Cdd:PRK14289    6 DYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKE-AEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGVGGAAG---- 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 2047244344  83 hyhNADHFGGGFT----FRNPEDVFREFFGGrdpFADFFAddnfFGGGQRQRGV 132
Cdd:PRK14289   81 ---GGGFSGEGMSmediFSMFGDIFGGHGGG---FGGFGG----FGGGGSQQRV 124
PRK14276 PRK14276
chaperone protein DnaJ; Provisional
 2-120 1.32e-30

chaperone protein DnaJ; Provisional


Pssm-ID: 237653 [Multi-domain]  Cd Length: 380  Bit Score: 118.65  E-value: 1.32e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047244344   2 TEYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPEnqEDAERRFKEISEAYEVLSDANKRNLYDQYGKEGLTGSGGGGG 81
Cdd:PRK14276    4 TEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKE--PGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANGGFGGGA 81

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 2047244344  82 GHYHNADHFGGGFTFrnpEDVFREFFGG----RDPFADFFADD 120
Cdd:PRK14276   82 GGFGGFDGSGGFGGF---EDIFSSFFGGggarRNPNAPRQGDD 121
DnaJ smart00271
DnaJ molecular chaperone homology domain;
2-61 5.99e-30

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 108.09  E-value: 5.99e-30
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047244344    2 TEYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPENQEDAERRFKEISEAYEVLSDANK 61
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60
PRK14297 PRK14297
molecular chaperone DnaJ;
3-126 1.22e-28

molecular chaperone DnaJ;


Pssm-ID: 184611 [Multi-domain]  Cd Length: 380  Bit Score: 113.34  E-value: 1.22e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047244344   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPENQEdAERRFKEISEAYEVLSDANKRNLYDQYGkegltgsgggggg 82
Cdd:PRK14297    5 DYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKE-AEEKFKEINEAYQVLSDPQKKAQYDQFG------------- 70

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 2047244344  83 hyhNADHFG-GGFTFRNpedvFREF-FGGRDPFADFFadDNFFGGG 126
Cdd:PRK14297   71 ---TADFNGaGGFGSGG----FGGFdFSDMGGFGDIF--DSFFGGG 107
PRK14283 PRK14283
chaperone protein DnaJ; Provisional
 3-131 1.68e-28

chaperone protein DnaJ; Provisional


Pssm-ID: 184604 [Multi-domain]  Cd Length: 378  Bit Score: 113.00  E-value: 1.68e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047244344   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPEnqEDAERRFKEISEAYEVLSDANKRNLYDQYGkegltgsgggggg 82
Cdd:PRK14283    6 DYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEE--EGAEEKFKEISEAYAVLSDDEKRQRYDQFG------------- 70

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 2047244344  83 hYHNADHFGGGFTFRNP--EDVFREFFGGRDPFADFFAddnfFGGGQR---QRG 131
Cdd:PRK14283   71 -HAGMDGFSQEDIFNNInfEDIFQGFGFGIGNIFDMFG----FGGGSRhgpQRG 119
PRK14293 PRK14293
molecular chaperone DnaJ;
1-134 2.72e-28

molecular chaperone DnaJ;


Pssm-ID: 237663 [Multi-domain]  Cd Length: 374  Bit Score: 112.39  E-value: 2.72e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047244344   1 MTEYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPEnqEDAERRFKEISEAYEVLSDANKRNLYDQYGKEGLTGSGggg 80
Cdd:PRK14293    2 AADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKE--PGAEDRFKEINRAYEVLSDPETRARYDQFGEAGVSGAA--- 76

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2047244344  81 gghyhNADHFG--GGFTfrnpeDVFREFFGGrdpfadfFADDNFFGGGQRQRGVSQ 134
Cdd:PRK14293   77 -----GFPDMGdmGGFA-----DIFETFFSG-------FGGAGGQGGRRRRRGPQR 115
PRK14278 PRK14278
chaperone protein DnaJ; Provisional
 2-131 4.96e-28

chaperone protein DnaJ; Provisional


Pssm-ID: 237654 [Multi-domain]  Cd Length: 378  Bit Score: 111.68  E-value: 4.96e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047244344   2 TEYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPEnqEDAERRFKEISEAYEVLSDANKRNLYDQYGKEGLtgsggggg 81
Cdd:PRK14278    3 RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPD--EEAQEKFKEISVAYEVLSDPEKRRIVDLGGDPLE-------- 72

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 2047244344  82 ghyhNADHFGGGFTFRnpedvfrefFGGrdpFADFFadDNFFGGGQRQRG 131
Cdd:PRK14278   73 ----SAGGGGGGFGGG---------FGG---LGDVF--EAFFGGGAASRG 104
PRK14286 PRK14286
chaperone protein DnaJ; Provisional
 4-131 2.23e-27

chaperone protein DnaJ; Provisional


Pssm-ID: 172774 [Multi-domain]  Cd Length: 372  Bit Score: 109.69  E-value: 2.23e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047244344   4 YYQILGVQRNASAEDIKKAYRKLALKWHPDKNPENQEdAERRFKEISEAYEVLSDANKRNLYDQYGKEGLTGsggggggh 83
Cdd:PRK14286    6 YYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKE-SEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNA-------- 76

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 2047244344  84 yhNADHFGGGfTFRNPEDVFREFfggRDPFADFFAD--DNFFGGGQR---QRG 131
Cdd:PRK14286   77 --GAGGFGQG-AYTDFSDIFGDF---GDIFGDFFGGgrGGGSGGGRRsgpQRG 123
SEC63 COG5407
Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular ...
 3-62 3.55e-27

Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 444165 [Multi-domain]  Cd Length: 61  Bit Score: 100.84  E-value: 3.55e-27
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047244344   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPENQeDAERRFKEISEAYEVLSDANKR 62
Cdd:COG5407     1 DPYEVLGVAKTASADEIKKAYRKLAKKYHPDRNKGDP-KAEERFKEINEAYELLSDAEKR 59
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 3-58 3.63e-27

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 100.70  E-value: 3.63e-27
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2047244344   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPENqEDAERRFKEISEAYEVLSD 58
Cdd:cd06257     1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDD-PEAEEKFKEINEAYEVLSD 55
PRK14299 PRK14299
chaperone protein DnaJ; Provisional
 3-130 1.68e-26

chaperone protein DnaJ; Provisional


Pssm-ID: 237667 [Multi-domain]  Cd Length: 291  Bit Score: 105.79  E-value: 1.68e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047244344   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPEnqEDAERRFKEISEAYEVLSDANKRNLYDQYGKEGLTGSGGGGGG 82
Cdd:PRK14299    5 DYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKS--PGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGWQGPPP 82

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 2047244344  83 hyhnADHFGGGFTFRNPED---VFREFFGGRDPFADFfaDDNFFGGGQRQR 130
Cdd:PRK14299   83 ----GPPGGGDFSGFNVGDfsdFFQQLFGGRGGFGGF--GDLFGSVGRRAR 127
PRK14292 PRK14292
chaperone protein DnaJ; Provisional
 1-134 2.93e-26

chaperone protein DnaJ; Provisional


Pssm-ID: 237662 [Multi-domain]  Cd Length: 371  Bit Score: 106.51  E-value: 2.93e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047244344   1 MTEYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPEnqEDAERRFKEISEAYEVLSDANKRNLYDQYGKEGLTGSGggg 80
Cdd:PRK14292    1 MMDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKE--KGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAPGAGMP--- 75

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2047244344  81 gghyhNADHFGG-GFtfrNPEDVFREFFGGRDpfadffaddnfFGGGQRQRGVSQ 134
Cdd:PRK14292   76 -----GGDPFGGmGF---DPMDIFEQLFGGAG-----------FGGGRGRRGPAR 111
PRK14285 PRK14285
chaperone protein DnaJ; Provisional
 3-129 6.77e-25

chaperone protein DnaJ; Provisional


Pssm-ID: 172773 [Multi-domain]  Cd Length: 365  Bit Score: 102.76  E-value: 6.77e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047244344   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPENQEdAERRFKEISEAYEVLSDANKRNLYDQYGkegltgsgggggg 82
Cdd:PRK14285    4 DYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKE-AESIFKEATEAYEVLIDDNKRAQYDRFG------------- 69

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2047244344  83 hyHNADHFGGGFTfrnpedvfrEFFGGRDPFADFFAD-----DNFFGGGQRQ 129
Cdd:PRK14285   70 --HTAFEGGGGFE---------GFSGGFSGFSDIFEDfgdifDSFFTGNRGQ 110
CbpA COG2214
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];
1-67 1.89e-24

Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];


Pssm-ID: 441816 [Multi-domain]  Cd Length: 91  Bit Score: 94.78  E-value: 1.89e-24
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2047244344   1 MTEYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPENQEDAERRFKEISEAYEVLSDANKRNLYDQ 67
Cdd:COG2214     4 LKDHYAVLGVPPDASLEEIRQAYRRLAKLLHPDRGGELKALAEELFQRLNEAYEVLSDPERRAEYDR 70
PRK14287 PRK14287
chaperone protein DnaJ; Provisional
 3-136 1.80e-23

chaperone protein DnaJ; Provisional


Pssm-ID: 237659 [Multi-domain]  Cd Length: 371  Bit Score: 98.93  E-value: 1.80e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047244344   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPEnqEDAERRFKEISEAYEVLSDANKRNLYDQYGkegltgsgggggg 82
Cdd:PRK14287    5 DYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKA--PDAEDKFKEVKEAYDTLSDPQKKAHYDQFG------------- 69

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 2047244344  83 HYHNADHFGGGFTfrnpedvfreffGGRDPFADFFadDNFFGGGQRQRGVSQSR 136
Cdd:PRK14287   70 HTDPNQGFGGGGA------------GDFGGFSDIF--DMFFGGGGGRRNPNAPR 109
PRK14279 PRK14279
molecular chaperone DnaJ;
3-127 6.52e-23

molecular chaperone DnaJ;


Pssm-ID: 237655 [Multi-domain]  Cd Length: 392  Bit Score: 97.50  E-value: 6.52e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047244344   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPENQEdAERRFKEISEAYEVLSDANKRNLYDQYGKegltgsgggggg 82
Cdd:PRK14279   10 DFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPA-AEERFKAVSEAHDVLSDPAKRKEYDETRR------------ 76

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 2047244344  83 hyhnadHFGGGFTFRNPEDVFREF--FGGRDPFADFFADDNFFGGGQ 127
Cdd:PRK14279   77 ------LFAGGGFGGRRFDGGGGFggFGTGGDGAEFNLNDLFDAAGR 117
PRK14295 PRK14295
molecular chaperone DnaJ;
3-67 6.74e-22

molecular chaperone DnaJ;


Pssm-ID: 237665 [Multi-domain]  Cd Length: 389  Bit Score: 94.92  E-value: 6.74e-22
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2047244344   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPENQEdAERRFKEISEAYEVLSDANKRNLYDQ 67
Cdd:PRK14295   10 DYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAK-AEERFKEISEAYDVLSDEKKRKEYDE 73
PRK14300 PRK14300
chaperone protein DnaJ; Provisional
 3-133 9.92e-22

chaperone protein DnaJ; Provisional


Pssm-ID: 172788 [Multi-domain]  Cd Length: 372  Bit Score: 93.93  E-value: 9.92e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047244344   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNpeNQEDAERRFKEISEAYEVLSDANKRNLYDQYGKEgltgsggggGG 82
Cdd:PRK14300    4 DYYQILGVSKTASQADLKKAYLKLAKQYHPDTT--DAKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHD---------AF 72

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 2047244344  83 HYHNADHFGGGFTFRNPEDvfreffggRDPFADFFADdnFFGGGQRQRGVS 133
Cdd:PRK14300   73 QNQQSRGGGGNHGGFHPDI--------NDIFGDFFSD--FMGGSRRSRPTS 113
PTZ00037 PTZ00037
DnaJ_C chaperone protein; Provisional
 3-109 1.32e-21

DnaJ_C chaperone protein; Provisional


Pssm-ID: 240236 [Multi-domain]  Cd Length: 421  Bit Score: 94.12  E-value: 1.32e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047244344   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDK--NPEnqedaerRFKEISEAYEVLSDANKRNLYDQYGKEGltgsgggg 80
Cdd:PTZ00037   29 KLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKggDPE-------KFKEISRAYEVLSDPEKRKIYDEYGEEG-------- 93

                          90       100
                  ....*....|....*....|....*....
gi 2047244344  81 gghyhnadhFGGGFTFRNPEDVFREFFGG 109
Cdd:PTZ00037   94 ---------LEGGEQPADASDLFDLIFGG 113
PRK14296 PRK14296
chaperone protein DnaJ; Provisional
 3-130 5.57e-21

chaperone protein DnaJ; Provisional


Pssm-ID: 237666 [Multi-domain]  Cd Length: 372  Bit Score: 91.93  E-value: 5.57e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047244344   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPENqeDAERRFKEISEAYEVLSDANKRNLYDQYGkegltgsgggggg 82
Cdd:PRK14296    5 DYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSP--DAHDKMVEINEAADVLLDKDKRKQYDQFG------------- 69

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2047244344  83 hyHNADHFGGGFT--FRNPEDVFREF--FGGRDpFADFFADdnFFGGGQRQR 130
Cdd:PRK14296   70 --HAAFDGSSGFSsnFGDFEDLFSNMgsSGFSS-FTNIFSD--FFGSNKSDY 116
PRK10266 PRK10266
curved DNA-binding protein;
3-130 2.86e-19

curved DNA-binding protein;


Pssm-ID: 182347 [Multi-domain]  Cd Length: 306  Bit Score: 86.41  E-value: 2.86e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047244344   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPENqeDAERRFKEISEAYEVLSDANKRNLYDQYgkegltgSGGGGGG 82
Cdd:PRK10266    5 DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEP--DAEARFKEVAEAWEVLSDEQRRAEYDQL-------WQHRNDP 75

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 2047244344  83 HYHNADHFGGGFTFrNPEDvfreffggrdpFADFFAddNFFGGGQRQR 130
Cdd:PRK10266   76 QFNRQFQHGDGQSF-NAED-----------FDDIFS--SIFGQHARQS 109
PRK14288 PRK14288
molecular chaperone DnaJ;
4-71 3.42e-17

molecular chaperone DnaJ;


Pssm-ID: 172776 [Multi-domain]  Cd Length: 369  Bit Score: 81.27  E-value: 3.42e-17
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2047244344   4 YYQILGVQRNASAEDIKKAYRKLALKWHPDKNPENQEdAERRFKEISEAYEVLSDANKRNLYDQYGKE 71
Cdd:PRK14288    5 YYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKE-AEEKFKLINEAYGVLSDEKKRALYDRYGKK 71
DjlA COG1076
DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];
1-64 3.45e-13

DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440694 [Multi-domain]  Cd Length: 75  Bit Score: 63.66  E-value: 3.45e-13
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2047244344   1 MTEYYQILGVQRNASAEDIKKAYRKLALKWHPDK-----NPENQEDAERRFKEISEAYEVLSDANKRNL 64
Cdd:COG1076     3 LDDAFELLGLPPDADDAELKRAYRKLQREHHPDRlaaglPEEEQRLALQKAAAINEAYETLKDPRGIDL 71
PTZ00341 PTZ00341
Ring-infected erythrocyte surface antigen; Provisional
 2-69 3.90e-11

Ring-infected erythrocyte surface antigen; Provisional


Pssm-ID: 173534 [Multi-domain]  Cd Length: 1136  Bit Score: 64.04  E-value: 3.90e-11
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2047244344    2 TEYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPENQedAERRFKEISEAYEVLSDANKRNLYDQYG 69
Cdd:PTZ00341   573 TLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGNE--GFHKFKKINEAYQILGDIDKKKMYNKFG 638
djlA PRK09430
co-chaperone DjlA;
5-56 8.99e-08

co-chaperone DjlA;


Pssm-ID: 236512 [Multi-domain]  Cd Length: 267  Bit Score: 52.51  E-value: 8.99e-08
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2047244344   5 YQILGVQRNASAEDIKKAYRKLALKWHPDK------NPENQEDAERRFKEISEAYEVL 56
Cdd:PRK09430  203 YKVLGVSESDDDQEIKRAYRKLMSEHHPDKlvakglPPEMMEMAKEKAQEIQAAYELI 260
ZUO1 COG5269
Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / ...
 3-66 2.23e-05

Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227594 [Multi-domain]  Cd Length: 379  Bit Score: 45.41  E-value: 2.23e-05
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2047244344   3 EYYQILGVQR---NASAEDIKKAYRKLALKWHPDKNPENQE-DAERRFKEISEAYEVLSDANKRNLYD 66
Cdd:COG5269    44 DLYALLGLSKyrtKAIPPQILKAHKKKVYKYHPDKTAAGGNkGCDEFFKLIQKAREVLGDRKLRLQYD 111
hscB PRK01356
co-chaperone HscB; Provisional
 1-65 3.57e-05

co-chaperone HscB; Provisional


Pssm-ID: 167217 [Multi-domain]  Cd Length: 166  Bit Score: 43.33  E-value: 3.57e-05
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2047244344   1 MTEYYQILGVQR--NASAEDIKKAYRKLALKWHPDKNPENQEDAERRF--KEISEAYEVLSDANKRNLY 65
Cdd:PRK01356    1 MQNYFQLLGLPQeyNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIiaSELNNAYSTLKDALKRAEY 69
PHA03102 PHA03102
Small T antigen; Reviewed
 6-37 1.34e-03

Small T antigen; Reviewed


Pssm-ID: 222986 [Multi-domain]  Cd Length: 153  Bit Score: 38.50  E-value: 1.34e-03
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 2047244344   6 QILGVQRNA--SAEDIKKAYRKLALKWHPDK--NPE 37
Cdd:PHA03102    9 DLLGLPRSAwgNLPLMRKAYLRKCLEFHPDKggDEE 44
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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