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Conserved domains on  [gi|2043849250|ref|XP_041576358|]
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agrin isoform X6 [Taeniopygia guttata]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
NtA pfam03146
Agrin NtA domain; Agrin is a multidomain heparan sulphate proteoglycan, that is a key ...
33-148 1.14e-49

Agrin NtA domain; Agrin is a multidomain heparan sulphate proteoglycan, that is a key organizer for the induction of postsynaptic specializations at the neuromuscular junction. Binding of agrin to basement membranes requires the amino terminal (NtA) domain. This region mediates high affinity interaction with the coiled-coil domain of laminins. The binding of agrin to laminins via the NtA domain is subject to tissue-specific regulation. The NtA domain-containing form of agrin is expressed in non-neuronal cells or in neurons that project to non-neuronal cell such as motor neurons. The structure of this domain is an OB-fold.


:

Pssm-ID: 460825  Cd Length: 109  Bit Score: 171.81  E-value: 1.14e-49
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2043849250   33 CPERELQRREEEANVVLTGTVEEIMNVDPVHHTYSCKVRVWRYLKGKDIVTHEILLDGGNKVVIGGFGDPLICDNQVATG 112
Cdd:pfam03146    1 CPDRTLEEREEEANVVLTGTVEEVMNVDPDGKTYSASVRVKRVMKGKSLLTQLILLDGGNKVTVDGLGDPLICDSQVRRG 80
                           90       100       110
                   ....*....|....*....|....*....|....*.
gi 2043849250  113 DTRIFFVNPAPQalwpahrNELMLNSSLMRITLRNL 148
Cdd:pfam03146   81 DTRIFFLNPAPD-------GELRLNSSLVRITLRNL 109
LamG cd00110
Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have ...
1417-1567 9.10e-44

Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of purposes including signal transduction via cell-surface steroid receptors, adhesion, migration and differentiation through mediation of cell adhesion molecules.


:

Pssm-ID: 238058 [Multi-domain]  Cd Length: 151  Bit Score: 156.42  E-value: 9.10e-44
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2043849250 1417 RFGGGSVLALRTLRA-YHTLRVALEFRALEPAGLLLYNAQRHGKDFIALALRGGLVQLRFDTGSGTGTVTSRVPVEPGRW 1495
Cdd:cd00110      3 SFSGSSYVRLPTLPApRTRLSISFSFRTTSPNGLLLYAGSQNGGDFLALELEDGRLVLRYDLGSGSLVLSSKTPLNDGQW 82
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2043849250 1496 HRLLVTRNRRTGTLAVDGEPPVSGHSPPGTDGLNLDTELFIGGVPEEHRALafeRTGVAGGLRGCVRALSIN 1567
Cdd:cd00110     83 HSVSVERNGRSVTLSVDGERVVESGSPGGSALLNLDGPLYLGGLPEDLKSP---GLPVSPGFVGCIRDLKVN 151
Laminin_G_1 pfam00054
Laminin G domain;
1941-2072 8.30e-41

Laminin G domain;


:

Pssm-ID: 395008 [Multi-domain]  Cd Length: 131  Bit Score: 147.46  E-value: 8.30e-41
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2043849250 1941 IKTEATQGLLLWSGKGLQRsDYIALAIVDGHVQLSYDLGSKGVTLRSSVPVNTNQWVRIRASRVQREGSLQVGNEAPIAG 2020
Cdd:pfam00054    1 FRTTEPSGLLLYNGTQTER-DFLALELRDGRLEVSYDLGSGAAVVRSGDKLNDGKWHSVELERNGRSGTLSVDGEARPTG 79
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|...
gi 2043849250 2021 SSPLGATQ-LDTDGALWLGGLDKPSVPQRlPKAFSTGFVGCMRDVLVDRRELH 2072
Cdd:pfam00054   80 ESPLGATTdLDVDGPLYVGGLPSLGVKKR-RLAISPSFDGCIRDVIVNGKPLD 131
Laminin_G_1 pfam00054
Laminin G domain;
1711-1844 6.20e-39

Laminin G domain;


:

Pssm-ID: 395008 [Multi-domain]  Cd Length: 131  Bit Score: 142.07  E-value: 6.20e-39
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2043849250 1711 ARRPRGLILYNGQRSDGggDFVSLALHGGHLEFRFDLGKGPALLRSREPVPLDTWVSVRLERSGRKGVLRVNGGPAVTGE 1790
Cdd:pfam00054    3 TTEPSGLLLYNGTQTER--DFLALELRDGRLEVSYDLGSGAAVVRSGDKLNDGKWHSVELERNGRSGTLSVDGEARPTGE 80
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....
gi 2043849250 1791 SPKSRKvphMVLNLKEPLYLGGAPDFSRLARAAAVSSGFEGALQKVLVDGVPVL 1844
Cdd:pfam00054   81 SPLGAT---TDLDVDGPLYVGGLPSLGVKKRRLAISPSFDGCIRDVIVNGKPLD 131
SEA smart00200
Domain found in sea urchin sperm protein, enterokinase, agrin; Proposed function of regulating ...
1153-1275 1.50e-25

Domain found in sea urchin sperm protein, enterokinase, agrin; Proposed function of regulating or binding carbohydrate sidechains.


:

Pssm-ID: 214554  Cd Length: 121  Bit Score: 103.26  E-value: 1.50e-25
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2043849250  1153 ATKVFQGVLILEEVEGQELFYTPEMADPKSELFGETARSIESALDELFRGSEVRRDFRSVRVRDLGQSSAVRVIVEAHFD 1232
Cdd:smart00200    1 PTQSFGVSLSVLSVEGENLQYSPSLEDPSSEEYQELVRDVEKLLEQIYGKTDLKPDFVGTEVIEFRNGSVVVDLGLLFNE 80
                            90       100       110       120
                    ....*....|....*....|....*....|....*....|...
gi 2043849250  1233 PATsyTAADIQGALLKQLRAARRkTILVKKpqQEHIKFMDFDW 1275
Cdd:smart00200   81 GVT--NGQDVEEDLLQVIKQAAY-SLKITN--VNVVDVLDPDS 118
EGF_Lam cd00055
Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous ...
800-841 7.57e-14

Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies


:

Pssm-ID: 238012  Cd Length: 50  Bit Score: 67.38  E-value: 7.57e-14
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 2043849250  800 SCQCNPHGSYGGSCEPGSGQCSCKPGVGGLRCDRCEPGFWNF 841
Cdd:cd00055      1 PCDCNGHGSLSGQCDPGTGQCECKPNTTGRRCDRCAPGYYGL 42
KAZAL smart00280
Kazal type serine protease inhibitors; Kazal type serine protease inhibitors and ...
564-609 1.97e-13

Kazal type serine protease inhibitors; Kazal type serine protease inhibitors and follistatin-like domains.


:

Pssm-ID: 197624  Cd Length: 46  Bit Score: 66.16  E-value: 1.97e-13
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*.
gi 2043849250   564 VCPTECVPSAQPVCGSDGNTYGSECELHVRACTQQENILVAAQGPC 609
Cdd:smart00280    1 DCPEACPREYDPVCGSDGVTYSNECHLCKAACESGKSIEVKHDGPC 46
KAZAL smart00280
Kazal type serine protease inhibitors; Kazal type serine protease inhibitors and ...
499-544 4.12e-12

Kazal type serine protease inhibitors; Kazal type serine protease inhibitors and follistatin-like domains.


:

Pssm-ID: 197624  Cd Length: 46  Bit Score: 62.31  E-value: 4.12e-12
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*.
gi 2043849250   499 ECQQQCQGRYDPVCGTDQRTYGSPCELHAMACLLQRDIGLRHRGPC 544
Cdd:smart00280    1 DCPEACPREYDPVCGSDGVTYSNECHLCKAACESGKSIEVKHDGPC 46
KAZAL smart00280
Kazal type serine protease inhibitors; Kazal type serine protease inhibitors and ...
713-759 2.79e-11

Kazal type serine protease inhibitors; Kazal type serine protease inhibitors and follistatin-like domains.


:

Pssm-ID: 197624  Cd Length: 46  Bit Score: 60.00  E-value: 2.79e-11
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*..
gi 2043849250   713 VCDFTCAAAPRaPVCGSDGVTYANECQLKKTRCEKRQELFVTSQGAC 759
Cdd:smart00280    1 DCPEACPREYD-PVCGSDGVTYSNECHLCKAACESGKSIEVKHDGPC 46
KAZAL smart00280
Kazal type serine protease inhibitors; Kazal type serine protease inhibitors and ...
630-674 5.82e-11

Kazal type serine protease inhibitors; Kazal type serine protease inhibitors and follistatin-like domains.


:

Pssm-ID: 197624  Cd Length: 46  Bit Score: 59.23  E-value: 5.82e-11
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*
gi 2043849250   630 CPRCERQPPAPVCGSDGVTYPSPCQLQVASCQLQKSIQVARTGPC 674
Cdd:smart00280    2 CPEACPREYDPVCGSDGVTYSNECHLCKAACESGKSIEVKHDGPC 46
KAZAL smart00280
Kazal type serine protease inhibitors; Kazal type serine protease inhibitors and ...
211-251 1.59e-10

Kazal type serine protease inhibitors; Kazal type serine protease inhibitors and follistatin-like domains.


:

Pssm-ID: 197624  Cd Length: 46  Bit Score: 58.07  E-value: 1.59e-10
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|.
gi 2043849250   211 CAPVVAPVCGSDHSTYSNECELDRAQCNQQRRIKVVSKGPC 251
Cdd:smart00280    6 CPREYDPVCGSDGVTYSNECHLCKAACESGKSIEVKHDGPC 46
KAZAL smart00280
Kazal type serine protease inhibitors; Kazal type serine protease inhibitors and ...
280-326 6.97e-10

Kazal type serine protease inhibitors; Kazal type serine protease inhibitors and follistatin-like domains.


:

Pssm-ID: 197624  Cd Length: 46  Bit Score: 56.15  E-value: 6.97e-10
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*..
gi 2043849250   280 VCPSSCGGVaESPVCGSDGRDYRSLCHLQKHACDAQQDLAKQFDGPC 326
Cdd:smart00280    1 DCPEACPRE-YDPVCGSDGVTYSNECHLCKAACESGKSIEVKHDGPC 46
KAZAL smart00280
Kazal type serine protease inhibitors; Kazal type serine protease inhibitors and ...
930-977 2.77e-09

Kazal type serine protease inhibitors; Kazal type serine protease inhibitors and follistatin-like domains.


:

Pssm-ID: 197624  Cd Length: 46  Bit Score: 54.61  E-value: 2.77e-09
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*...
gi 2043849250   930 ECPSPlCPEgNATKVCGSDGVTYGDQCQLRTIACRQGQHITVKHVGQC 977
Cdd:smart00280    1 DCPEA-CPR-EYDPVCGSDGVTYSNECHLCKAACESGKSIEVKHDGPC 46
KAZAL_FS cd00104
Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit ...
430-470 1.83e-08

Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the cognate enzyme as substrate. The reactive site peptide bond is a combining loop which has an identical conformation in all Kazal inhibitors and in all enzyme/inhibitor complexes. These Kazal domains (small hydrophobic core of alpha/beta structure with 3 to 4 disulfide bonds) often occur in tandem arrays. Similar domains are also present in follistatin (FS) and follistatin-like family members, which play an important role in tissue specific regulation. The FS domain consists of an N-terminal beta hairpin (FOLN/EGF-like domain) and a Kazal-like domain and has five disulfide bonds. Although the Kazal-like FS substructure is similar to Kazal proteinase inhibitors, no FS domain has yet been shown to be a proteinase inhibitor. Follistatin-like family members include SPARC, also known as, BM-40 or osteonectin, the Gallus gallus Flik protein, as well as, agrin which has a long array of FS domains. The kazal-type inhibitor domain has also been detected in an extracellular loop region of solute carrier 21 (SLC21) family members (organic anion transporters) , which may regulate the specificity of anion uptake. The distant homolog, Ascidian trypsin inhibitor, is included in this CD.


:

Pssm-ID: 238052 [Multi-domain]  Cd Length: 41  Bit Score: 51.89  E-value: 1.83e-08
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 2043849250  430 CDGAFRPLCGGDGRTYGSDCQRRRAECLRQAGIAVRHRGPC 470
Cdd:cd00104      1 CPKEYDPVCGSDGKTYSNECHLGCAACRSGRSITVAHNGPC 41
KAZAL smart00280
Kazal type serine protease inhibitors; Kazal type serine protease inhibitors and ...
355-398 2.08e-08

Kazal type serine protease inhibitors; Kazal type serine protease inhibitors and follistatin-like domains.


:

Pssm-ID: 197624  Cd Length: 46  Bit Score: 51.91  E-value: 2.08e-08
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....
gi 2043849250   355 PEDCPPGSGPVCGDDGVTYESECAMGRAGAIRGIDIQKVRSGQC 398
Cdd:smart00280    3 PEACPREYDPVCGSDGVTYSNECHLCKAACESGKSIEVKHDGPC 46
Laminin_EGF pfam00053
Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.
855-891 9.82e-08

Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.


:

Pssm-ID: 395007  Cd Length: 49  Bit Score: 50.04  E-value: 9.82e-08
                           10        20        30
                   ....*....|....*....|....*....|....*..
gi 2043849250  855 CGCDPVGSVRDDCEQMSGLCSCRPGISGMKCSRCPAG 891
Cdd:pfam00053    1 CDCNPHGSLSDTCDPETGQCLCKPGVTGRHCDRCKPG 37
EGF_CA cd00054
Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular ...
1865-1897 5.15e-06

Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.


:

Pssm-ID: 238011  Cd Length: 38  Bit Score: 44.94  E-value: 5.15e-06
                           10        20        30
                   ....*....|....*....|....*....|...
gi 2043849250 1865 QEPNPCQPGGTCQPSMAGYQCSCHAGFAGARCE 1897
Cdd:cd00054      6 ASGNPCQNGGTCVNTVGSYRCSCPPGYTGRNCE 38
PHA03378 super family cl33729
EBNA-3B; Provisional
1292-1362 5.41e-04

EBNA-3B; Provisional


The actual alignment was detected with superfamily member PHA03378:

Pssm-ID: 223065 [Multi-domain]  Cd Length: 991  Bit Score: 45.06  E-value: 5.41e-04
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2043849250 1292 AAPGSARRVPAATAALGQPVGSPGQPVGTAGTAGHPGHPVGTVGSPGEPVGTTGTARSPAGTAGSSRGAPP 1362
Cdd:PHA03378   709 APPGRAQRPAAATGRARPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGAPTPQPP 779
EGF_CA cd00054
Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular ...
1381-1408 8.19e-04

Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.


:

Pssm-ID: 238011  Cd Length: 38  Bit Score: 38.77  E-value: 8.19e-04
                           10        20
                   ....*....|....*....|....*...
gi 2043849250 1381 CRHGGTCRDDGHGFTCSCPAGTAGTTCE 1408
Cdd:cd00054     11 CQNGGTCVNTVGSYRCSCPPGYTGRNCE 38
EGF pfam00008
EGF-like domain; There is no clear separation between noise and signal. pfam00053 is very ...
1594-1625 1.23e-03

EGF-like domain; There is no clear separation between noise and signal. pfam00053 is very similar, but has 8 instead of 6 conserved cysteines. Includes some cytokine receptors. The EGF domain misses the N-terminus regions of the Ca2+ binding EGF domains (this is the main reason of discrepancy between swiss-prot domain start/end and Pfam). The family is hard to model due to many similar but different sub-types of EGF domains. Pfam certainly misses a number of EGF domains.


:

Pssm-ID: 394967  Cd Length: 31  Bit Score: 38.13  E-value: 1.23e-03
                           10        20        30
                   ....*....|....*....|....*....|..
gi 2043849250 1594 CQPNPCHHGGTCQpRDADAFQCQCPEAYAGPT 1625
Cdd:pfam00008    1 CAPNPCSNGGTCV-DTPGGYTCICPEGYTGKR 31
 
Name Accession Description Interval E-value
NtA pfam03146
Agrin NtA domain; Agrin is a multidomain heparan sulphate proteoglycan, that is a key ...
33-148 1.14e-49

Agrin NtA domain; Agrin is a multidomain heparan sulphate proteoglycan, that is a key organizer for the induction of postsynaptic specializations at the neuromuscular junction. Binding of agrin to basement membranes requires the amino terminal (NtA) domain. This region mediates high affinity interaction with the coiled-coil domain of laminins. The binding of agrin to laminins via the NtA domain is subject to tissue-specific regulation. The NtA domain-containing form of agrin is expressed in non-neuronal cells or in neurons that project to non-neuronal cell such as motor neurons. The structure of this domain is an OB-fold.


Pssm-ID: 460825  Cd Length: 109  Bit Score: 171.81  E-value: 1.14e-49
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2043849250   33 CPERELQRREEEANVVLTGTVEEIMNVDPVHHTYSCKVRVWRYLKGKDIVTHEILLDGGNKVVIGGFGDPLICDNQVATG 112
Cdd:pfam03146    1 CPDRTLEEREEEANVVLTGTVEEVMNVDPDGKTYSASVRVKRVMKGKSLLTQLILLDGGNKVTVDGLGDPLICDSQVRRG 80
                           90       100       110
                   ....*....|....*....|....*....|....*.
gi 2043849250  113 DTRIFFVNPAPQalwpahrNELMLNSSLMRITLRNL 148
Cdd:pfam03146   81 DTRIFFLNPAPD-------GELRLNSSLVRITLRNL 109
LamG cd00110
Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have ...
1417-1567 9.10e-44

Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of purposes including signal transduction via cell-surface steroid receptors, adhesion, migration and differentiation through mediation of cell adhesion molecules.


Pssm-ID: 238058 [Multi-domain]  Cd Length: 151  Bit Score: 156.42  E-value: 9.10e-44
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2043849250 1417 RFGGGSVLALRTLRA-YHTLRVALEFRALEPAGLLLYNAQRHGKDFIALALRGGLVQLRFDTGSGTGTVTSRVPVEPGRW 1495
Cdd:cd00110      3 SFSGSSYVRLPTLPApRTRLSISFSFRTTSPNGLLLYAGSQNGGDFLALELEDGRLVLRYDLGSGSLVLSSKTPLNDGQW 82
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2043849250 1496 HRLLVTRNRRTGTLAVDGEPPVSGHSPPGTDGLNLDTELFIGGVPEEHRALafeRTGVAGGLRGCVRALSIN 1567
Cdd:cd00110     83 HSVSVERNGRSVTLSVDGERVVESGSPGGSALLNLDGPLYLGGLPEDLKSP---GLPVSPGFVGCIRDLKVN 151
Laminin_G_1 pfam00054
Laminin G domain;
1941-2072 8.30e-41

Laminin G domain;


Pssm-ID: 395008 [Multi-domain]  Cd Length: 131  Bit Score: 147.46  E-value: 8.30e-41
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2043849250 1941 IKTEATQGLLLWSGKGLQRsDYIALAIVDGHVQLSYDLGSKGVTLRSSVPVNTNQWVRIRASRVQREGSLQVGNEAPIAG 2020
Cdd:pfam00054    1 FRTTEPSGLLLYNGTQTER-DFLALELRDGRLEVSYDLGSGAAVVRSGDKLNDGKWHSVELERNGRSGTLSVDGEARPTG 79
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|...
gi 2043849250 2021 SSPLGATQ-LDTDGALWLGGLDKPSVPQRlPKAFSTGFVGCMRDVLVDRRELH 2072
Cdd:pfam00054   80 ESPLGATTdLDVDGPLYVGGLPSLGVKKR-RLAISPSFDGCIRDVIVNGKPLD 131
LamG smart00282
Laminin G domain;
1436-1569 1.17e-40

Laminin G domain;


Pssm-ID: 214598 [Multi-domain]  Cd Length: 132  Bit Score: 147.10  E-value: 1.17e-40
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2043849250  1436 RVALEFRALEPAGLLLYNAQRHGKDFIALALRGGLVQLRFDTGSGTGTVTS-RVPVEPGRWHRLLVTRNRRTGTLAVDGE 1514
Cdd:smart00282    1 SISFSFRTTSPNGLLLYAGSKGGGDYLALELRDGRLVLRYDLGSGPARLTSdPTPLNDGQWHRVAVERNGRSVTLSVDGG 80
                            90       100       110       120       130
                    ....*....|....*....|....*....|....*....|....*....|....*
gi 2043849250  1515 PPVSGHSPPGTDGLNLDTELFIGGVPEEHRAlafERTGVAGGLRGCVRALSINNR 1569
Cdd:smart00282   81 NRVSGESPGGLTILNLDGPLYLGGLPEDLKL---PPLPVTPGFRGCIRNLKVNGK 132
Laminin_G_1 pfam00054
Laminin G domain;
1711-1844 6.20e-39

Laminin G domain;


Pssm-ID: 395008 [Multi-domain]  Cd Length: 131  Bit Score: 142.07  E-value: 6.20e-39
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2043849250 1711 ARRPRGLILYNGQRSDGggDFVSLALHGGHLEFRFDLGKGPALLRSREPVPLDTWVSVRLERSGRKGVLRVNGGPAVTGE 1790
Cdd:pfam00054    3 TTEPSGLLLYNGTQTER--DFLALELRDGRLEVSYDLGSGAAVVRSGDKLNDGKWHSVELERNGRSGTLSVDGEARPTGE 80
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....
gi 2043849250 1791 SPKSRKvphMVLNLKEPLYLGGAPDFSRLARAAAVSSGFEGALQKVLVDGVPVL 1844
Cdd:pfam00054   81 SPLGAT---TDLDVDGPLYVGGLPSLGVKKRRLAISPSFDGCIRDVIVNGKPLD 131
Laminin_G_1 pfam00054
Laminin G domain;
1441-1569 6.57e-39

Laminin G domain;


Pssm-ID: 395008 [Multi-domain]  Cd Length: 131  Bit Score: 142.07  E-value: 6.57e-39
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2043849250 1441 FRALEPAGLLLYNAQRHGKDFIALALRGGLVQLRFDTGSGTGTVTSRVPVEPGRWHRLLVTRNRRTGTLAVDGEPPVSGH 1520
Cdd:pfam00054    1 FRTTEPSGLLLYNGTQTERDFLALELRDGRLEVSYDLGSGAAVVRSGDKLNDGKWHSVELERNGRSGTLSVDGEARPTGE 80
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|
gi 2043849250 1521 SPPGTDG-LNLDTELFIGGVPEEhrALAFERTGVAGGLRGCVRALSINNR 1569
Cdd:pfam00054   81 SPLGATTdLDVDGPLYVGGLPSL--GVKKRRLAISPSFDGCIRDVIVNGK 128
LamG cd00110
Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have ...
1910-2067 5.43e-38

Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of purposes including signal transduction via cell-surface steroid receptors, adhesion, migration and differentiation through mediation of cell adhesion molecules.


Pssm-ID: 238058 [Multi-domain]  Cd Length: 151  Bit Score: 140.25  E-value: 5.43e-38
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2043849250 1910 AVAFDGRTYLEFhnavTRSEKALQSNHFELSIKTEATQGLLLWSGkGLQRSDYIALAIVDGHVQLSYDLGSKGVTLRSSV 1989
Cdd:cd00110      1 GVSFSGSSYVRL----PTLPAPRTRLSISFSFRTTSPNGLLLYAG-SQNGGDFLALELEDGRLVLRYDLGSGSLVLSSKT 75
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2043849250 1990 PVNTNQWVRIRASRVQREGSLQVGNEAPIAGSSPLGATQLDTDGALWLGGLdkPSVPQRLPKAFSTGFVGCMRDVLVD 2067
Cdd:cd00110     76 PLNDGQWHSVSVERNGRSVTLSVDGERVVESGSPGGSALLNLDGPLYLGGL--PEDLKSPGLPVSPGFVGCIRDLKVN 151
LamG smart00282
Laminin G domain;
1936-2069 1.37e-35

Laminin G domain;


Pssm-ID: 214598 [Multi-domain]  Cd Length: 132  Bit Score: 132.46  E-value: 1.37e-35
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2043849250  1936 HFELSIKTEATQGLLLWSGkGLQRSDYIALAIVDGHVQLSYDLGSKGVTLRSS-VPVNTNQWVRIRASRVQREGSLQVGN 2014
Cdd:smart00282    1 SISFSFRTTSPNGLLLYAG-SKGGGDYLALELRDGRLVLRYDLGSGPARLTSDpTPLNDGQWHRVAVERNGRSVTLSVDG 79
                            90       100       110       120       130
                    ....*....|....*....|....*....|....*....|....*....|....*
gi 2043849250  2015 EAPIAGSSPLGATQLDTDGALWLGGLdkPSVPQRLPKAFSTGFVGCMRDVLVDRR 2069
Cdd:smart00282   80 GNRVSGESPGGLTILNLDGPLYLGGL--PEDLKLPPLPVTPGFRGCIRNLKVNGK 132
LamG cd00110
Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have ...
1681-1839 3.25e-34

Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of purposes including signal transduction via cell-surface steroid receptors, adhesion, migration and differentiation through mediation of cell adhesion molecules.


Pssm-ID: 238058 [Multi-domain]  Cd Length: 151  Bit Score: 129.46  E-value: 3.25e-34
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2043849250 1681 FSGSSYLELPGLQSFvpglPDRMSLDLVLLARRPRGLILYNGqrSDGGGDFVSLALHGGHLEFRFDLGKGPALLRSREPV 1760
Cdd:cd00110      4 FSGSSYVRLPTLPAP----RTRLSISFSFRTTSPNGLLLYAG--SQNGGDFLALELEDGRLVLRYDLGSGSLVLSSKTPL 77
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2043849250 1761 PLDTWVSVRLERSGRKGVLRVNGGPAVTGESPKSrkvpHMVLNLKEPLYLGGAPDFSRLaRAAAVSSGFEGALQKVLVD 1839
Cdd:cd00110     78 NDGQWHSVSVERNGRSVTLSVDGERVVESGSPGG----SALLNLDGPLYLGGLPEDLKS-PGLPVSPGFVGCIRDLKVN 151
LamG smart00282
Laminin G domain;
1704-1841 2.67e-30

Laminin G domain;


Pssm-ID: 214598 [Multi-domain]  Cd Length: 132  Bit Score: 117.44  E-value: 2.67e-30
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2043849250  1704 SLDLVLLARRPRGLILYNGqrSDGGGDFVSLALHGGHLEFRFDLGKGPALLRS-REPVPLDTWVSVRLERSGRKGVLRVN 1782
Cdd:smart00282    1 SISFSFRTTSPNGLLLYAG--SKGGGDYLALELRDGRLVLRYDLGSGPARLTSdPTPLNDGQWHRVAVERNGRSVTLSVD 78
                            90       100       110       120       130
                    ....*....|....*....|....*....|....*....|....*....|....*....
gi 2043849250  1783 GGPAVTGESPKSRKvphmVLNLKEPLYLGGAPDFSRLaRAAAVSSGFEGALQKVLVDGV 1841
Cdd:smart00282   79 GGNRVSGESPGGLT----ILNLDGPLYLGGLPEDLKL-PPLPVTPGFRGCIRNLKVNGK 132
SEA smart00200
Domain found in sea urchin sperm protein, enterokinase, agrin; Proposed function of regulating ...
1153-1275 1.50e-25

Domain found in sea urchin sperm protein, enterokinase, agrin; Proposed function of regulating or binding carbohydrate sidechains.


Pssm-ID: 214554  Cd Length: 121  Bit Score: 103.26  E-value: 1.50e-25
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2043849250  1153 ATKVFQGVLILEEVEGQELFYTPEMADPKSELFGETARSIESALDELFRGSEVRRDFRSVRVRDLGQSSAVRVIVEAHFD 1232
Cdd:smart00200    1 PTQSFGVSLSVLSVEGENLQYSPSLEDPSSEEYQELVRDVEKLLEQIYGKTDLKPDFVGTEVIEFRNGSVVVDLGLLFNE 80
                            90       100       110       120
                    ....*....|....*....|....*....|....*....|...
gi 2043849250  1233 PATsyTAADIQGALLKQLRAARRkTILVKKpqQEHIKFMDFDW 1275
Cdd:smart00200   81 GVT--NGQDVEEDLLQVIKQAAY-SLKITN--VNVVDVLDPDS 118
EGF_Lam cd00055
Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous ...
800-841 7.57e-14

Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies


Pssm-ID: 238012  Cd Length: 50  Bit Score: 67.38  E-value: 7.57e-14
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 2043849250  800 SCQCNPHGSYGGSCEPGSGQCSCKPGVGGLRCDRCEPGFWNF 841
Cdd:cd00055      1 PCDCNGHGSLSGQCDPGTGQCECKPNTTGRRCDRCAPGYYGL 42
SEA pfam01390
SEA domain; Domain found in Sea urchin sperm protein, Enterokinase, Agrin (SEA). Proposed ...
1171-1257 1.15e-13

SEA domain; Domain found in Sea urchin sperm protein, Enterokinase, Agrin (SEA). Proposed function of regulating or binding carbohydrate side chains. Recently a proteolytic activity has been shown for a SEA domain.


Pssm-ID: 460188  Cd Length: 100  Bit Score: 68.80  E-value: 1.15e-13
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2043849250 1171 LFYTPEMADPKSELFGETARSIESALDELFRGSEVRRDFRSVRVRDLGQSS-AVRVIVEAHFDPATSYTAADIQGALLKQ 1249
Cdd:pfam01390   12 LQYTPDLGNPSSQEFKSLSRRIESLLNELFRNSSLRKQYIKSHVLRLRPDGgSVVVDVVLVFRFPSTEPALDREKLIEEI 91

                   ....*...
gi 2043849250 1250 LRAARRKT 1257
Cdd:pfam01390   92 LRQTLNNT 99
Laminin_EGF pfam00053
Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.
801-843 1.31e-13

Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.


Pssm-ID: 395007  Cd Length: 49  Bit Score: 66.61  E-value: 1.31e-13
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|...
gi 2043849250  801 CQCNPHGSYGGSCEPGSGQCSCKPGVGGLRCDRCEPGFWNFRG 843
Cdd:pfam00053    1 CDCNPHGSLSDTCDPETGQCLCKPGVTGRHCDRCKPGYYGLPS 43
KAZAL smart00280
Kazal type serine protease inhibitors; Kazal type serine protease inhibitors and ...
564-609 1.97e-13

Kazal type serine protease inhibitors; Kazal type serine protease inhibitors and follistatin-like domains.


Pssm-ID: 197624  Cd Length: 46  Bit Score: 66.16  E-value: 1.97e-13
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*.
gi 2043849250   564 VCPTECVPSAQPVCGSDGNTYGSECELHVRACTQQENILVAAQGPC 609
Cdd:smart00280    1 DCPEACPREYDPVCGSDGVTYSNECHLCKAACESGKSIEVKHDGPC 46
EGF_Lam smart00180
Laminin-type epidermal growth factor-like domai;
801-843 9.04e-13

Laminin-type epidermal growth factor-like domai;


Pssm-ID: 214543  Cd Length: 46  Bit Score: 64.25  E-value: 9.04e-13
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 2043849250   801 CQCNPHGSYGGSCEPGSGQCSCKPGVGGLRCDRCEPGFWNFRG 843
Cdd:smart00180    1 CDCDPGGSASGTCDPDTGQCECKPNVTGRRCDRCAPGYYGDGP 43
KAZAL smart00280
Kazal type serine protease inhibitors; Kazal type serine protease inhibitors and ...
499-544 4.12e-12

Kazal type serine protease inhibitors; Kazal type serine protease inhibitors and follistatin-like domains.


Pssm-ID: 197624  Cd Length: 46  Bit Score: 62.31  E-value: 4.12e-12
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*.
gi 2043849250   499 ECQQQCQGRYDPVCGTDQRTYGSPCELHAMACLLQRDIGLRHRGPC 544
Cdd:smart00280    1 DCPEACPREYDPVCGSDGVTYSNECHLCKAACESGKSIEVKHDGPC 46
KAZAL smart00280
Kazal type serine protease inhibitors; Kazal type serine protease inhibitors and ...
713-759 2.79e-11

Kazal type serine protease inhibitors; Kazal type serine protease inhibitors and follistatin-like domains.


Pssm-ID: 197624  Cd Length: 46  Bit Score: 60.00  E-value: 2.79e-11
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*..
gi 2043849250   713 VCDFTCAAAPRaPVCGSDGVTYANECQLKKTRCEKRQELFVTSQGAC 759
Cdd:smart00280    1 DCPEACPREYD-PVCGSDGVTYSNECHLCKAACESGKSIEVKHDGPC 46
KAZAL smart00280
Kazal type serine protease inhibitors; Kazal type serine protease inhibitors and ...
630-674 5.82e-11

Kazal type serine protease inhibitors; Kazal type serine protease inhibitors and follistatin-like domains.


Pssm-ID: 197624  Cd Length: 46  Bit Score: 59.23  E-value: 5.82e-11
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*
gi 2043849250   630 CPRCERQPPAPVCGSDGVTYPSPCQLQVASCQLQKSIQVARTGPC 674
Cdd:smart00280    2 CPEACPREYDPVCGSDGVTYSNECHLCKAACESGKSIEVKHDGPC 46
KAZAL_FS cd00104
Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit ...
504-544 1.43e-10

Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the cognate enzyme as substrate. The reactive site peptide bond is a combining loop which has an identical conformation in all Kazal inhibitors and in all enzyme/inhibitor complexes. These Kazal domains (small hydrophobic core of alpha/beta structure with 3 to 4 disulfide bonds) often occur in tandem arrays. Similar domains are also present in follistatin (FS) and follistatin-like family members, which play an important role in tissue specific regulation. The FS domain consists of an N-terminal beta hairpin (FOLN/EGF-like domain) and a Kazal-like domain and has five disulfide bonds. Although the Kazal-like FS substructure is similar to Kazal proteinase inhibitors, no FS domain has yet been shown to be a proteinase inhibitor. Follistatin-like family members include SPARC, also known as, BM-40 or osteonectin, the Gallus gallus Flik protein, as well as, agrin which has a long array of FS domains. The kazal-type inhibitor domain has also been detected in an extracellular loop region of solute carrier 21 (SLC21) family members (organic anion transporters) , which may regulate the specificity of anion uptake. The distant homolog, Ascidian trypsin inhibitor, is included in this CD.


Pssm-ID: 238052 [Multi-domain]  Cd Length: 41  Bit Score: 58.05  E-value: 1.43e-10
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 2043849250  504 CQGRYDPVCGTDQRTYGSPCELHAMACLLQRDIGLRHRGPC 544
Cdd:cd00104      1 CPKEYDPVCGSDGKTYSNECHLGCAACRSGRSITVAHNGPC 41
KAZAL smart00280
Kazal type serine protease inhibitors; Kazal type serine protease inhibitors and ...
211-251 1.59e-10

Kazal type serine protease inhibitors; Kazal type serine protease inhibitors and follistatin-like domains.


Pssm-ID: 197624  Cd Length: 46  Bit Score: 58.07  E-value: 1.59e-10
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|.
gi 2043849250   211 CAPVVAPVCGSDHSTYSNECELDRAQCNQQRRIKVVSKGPC 251
Cdd:smart00280    6 CPREYDPVCGSDGVTYSNECHLCKAACESGKSIEVKHDGPC 46
KAZAL_FS cd00104
Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit ...
211-251 2.80e-10

Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the cognate enzyme as substrate. The reactive site peptide bond is a combining loop which has an identical conformation in all Kazal inhibitors and in all enzyme/inhibitor complexes. These Kazal domains (small hydrophobic core of alpha/beta structure with 3 to 4 disulfide bonds) often occur in tandem arrays. Similar domains are also present in follistatin (FS) and follistatin-like family members, which play an important role in tissue specific regulation. The FS domain consists of an N-terminal beta hairpin (FOLN/EGF-like domain) and a Kazal-like domain and has five disulfide bonds. Although the Kazal-like FS substructure is similar to Kazal proteinase inhibitors, no FS domain has yet been shown to be a proteinase inhibitor. Follistatin-like family members include SPARC, also known as, BM-40 or osteonectin, the Gallus gallus Flik protein, as well as, agrin which has a long array of FS domains. The kazal-type inhibitor domain has also been detected in an extracellular loop region of solute carrier 21 (SLC21) family members (organic anion transporters) , which may regulate the specificity of anion uptake. The distant homolog, Ascidian trypsin inhibitor, is included in this CD.


Pssm-ID: 238052 [Multi-domain]  Cd Length: 41  Bit Score: 57.28  E-value: 2.80e-10
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 2043849250  211 CAPVVAPVCGSDHSTYSNECELDRAQCNQQRRIKVVSKGPC 251
Cdd:cd00104      1 CPKEYDPVCGSDGKTYSNECHLGCAACRSGRSITVAHNGPC 41
KAZAL_FS cd00104
Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit ...
630-674 4.15e-10

Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the cognate enzyme as substrate. The reactive site peptide bond is a combining loop which has an identical conformation in all Kazal inhibitors and in all enzyme/inhibitor complexes. These Kazal domains (small hydrophobic core of alpha/beta structure with 3 to 4 disulfide bonds) often occur in tandem arrays. Similar domains are also present in follistatin (FS) and follistatin-like family members, which play an important role in tissue specific regulation. The FS domain consists of an N-terminal beta hairpin (FOLN/EGF-like domain) and a Kazal-like domain and has five disulfide bonds. Although the Kazal-like FS substructure is similar to Kazal proteinase inhibitors, no FS domain has yet been shown to be a proteinase inhibitor. Follistatin-like family members include SPARC, also known as, BM-40 or osteonectin, the Gallus gallus Flik protein, as well as, agrin which has a long array of FS domains. The kazal-type inhibitor domain has also been detected in an extracellular loop region of solute carrier 21 (SLC21) family members (organic anion transporters) , which may regulate the specificity of anion uptake. The distant homolog, Ascidian trypsin inhibitor, is included in this CD.


Pssm-ID: 238052 [Multi-domain]  Cd Length: 41  Bit Score: 56.51  E-value: 4.15e-10
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*
gi 2043849250  630 CPRCERqppaPVCGSDGVTYPSPCQLQVASCQLQKSIQVARTGPC 674
Cdd:cd00104      1 CPKEYD----PVCGSDGKTYSNECHLGCAACRSGRSITVAHNGPC 41
KAZAL_FS cd00104
Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit ...
569-609 5.51e-10

Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the cognate enzyme as substrate. The reactive site peptide bond is a combining loop which has an identical conformation in all Kazal inhibitors and in all enzyme/inhibitor complexes. These Kazal domains (small hydrophobic core of alpha/beta structure with 3 to 4 disulfide bonds) often occur in tandem arrays. Similar domains are also present in follistatin (FS) and follistatin-like family members, which play an important role in tissue specific regulation. The FS domain consists of an N-terminal beta hairpin (FOLN/EGF-like domain) and a Kazal-like domain and has five disulfide bonds. Although the Kazal-like FS substructure is similar to Kazal proteinase inhibitors, no FS domain has yet been shown to be a proteinase inhibitor. Follistatin-like family members include SPARC, also known as, BM-40 or osteonectin, the Gallus gallus Flik protein, as well as, agrin which has a long array of FS domains. The kazal-type inhibitor domain has also been detected in an extracellular loop region of solute carrier 21 (SLC21) family members (organic anion transporters) , which may regulate the specificity of anion uptake. The distant homolog, Ascidian trypsin inhibitor, is included in this CD.


Pssm-ID: 238052 [Multi-domain]  Cd Length: 41  Bit Score: 56.12  E-value: 5.51e-10
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 2043849250  569 CVPSAQPVCGSDGNTYGSECELHVRACTQQENILVAAQGPC 609
Cdd:cd00104      1 CPKEYDPVCGSDGKTYSNECHLGCAACRSGRSITVAHNGPC 41
KAZAL smart00280
Kazal type serine protease inhibitors; Kazal type serine protease inhibitors and ...
280-326 6.97e-10

Kazal type serine protease inhibitors; Kazal type serine protease inhibitors and follistatin-like domains.


Pssm-ID: 197624  Cd Length: 46  Bit Score: 56.15  E-value: 6.97e-10
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*..
gi 2043849250   280 VCPSSCGGVaESPVCGSDGRDYRSLCHLQKHACDAQQDLAKQFDGPC 326
Cdd:smart00280    1 DCPEACPRE-YDPVCGSDGVTYSNECHLCKAACESGKSIEVKHDGPC 46
KAZAL smart00280
Kazal type serine protease inhibitors; Kazal type serine protease inhibitors and ...
930-977 2.77e-09

Kazal type serine protease inhibitors; Kazal type serine protease inhibitors and follistatin-like domains.


Pssm-ID: 197624  Cd Length: 46  Bit Score: 54.61  E-value: 2.77e-09
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*...
gi 2043849250   930 ECPSPlCPEgNATKVCGSDGVTYGDQCQLRTIACRQGQHITVKHVGQC 977
Cdd:smart00280    1 DCPEA-CPR-EYDPVCGSDGVTYSNECHLCKAACESGKSIEVKHDGPC 46
KAZAL_FS cd00104
Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit ...
430-470 1.83e-08

Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the cognate enzyme as substrate. The reactive site peptide bond is a combining loop which has an identical conformation in all Kazal inhibitors and in all enzyme/inhibitor complexes. These Kazal domains (small hydrophobic core of alpha/beta structure with 3 to 4 disulfide bonds) often occur in tandem arrays. Similar domains are also present in follistatin (FS) and follistatin-like family members, which play an important role in tissue specific regulation. The FS domain consists of an N-terminal beta hairpin (FOLN/EGF-like domain) and a Kazal-like domain and has five disulfide bonds. Although the Kazal-like FS substructure is similar to Kazal proteinase inhibitors, no FS domain has yet been shown to be a proteinase inhibitor. Follistatin-like family members include SPARC, also known as, BM-40 or osteonectin, the Gallus gallus Flik protein, as well as, agrin which has a long array of FS domains. The kazal-type inhibitor domain has also been detected in an extracellular loop region of solute carrier 21 (SLC21) family members (organic anion transporters) , which may regulate the specificity of anion uptake. The distant homolog, Ascidian trypsin inhibitor, is included in this CD.


Pssm-ID: 238052 [Multi-domain]  Cd Length: 41  Bit Score: 51.89  E-value: 1.83e-08
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 2043849250  430 CDGAFRPLCGGDGRTYGSDCQRRRAECLRQAGIAVRHRGPC 470
Cdd:cd00104      1 CPKEYDPVCGSDGKTYSNECHLGCAACRSGRSITVAHNGPC 41
KAZAL smart00280
Kazal type serine protease inhibitors; Kazal type serine protease inhibitors and ...
355-398 2.08e-08

Kazal type serine protease inhibitors; Kazal type serine protease inhibitors and follistatin-like domains.


Pssm-ID: 197624  Cd Length: 46  Bit Score: 51.91  E-value: 2.08e-08
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....
gi 2043849250   355 PEDCPPGSGPVCGDDGVTYESECAMGRAGAIRGIDIQKVRSGQC 398
Cdd:smart00280    3 PEACPREYDPVCGSDGVTYSNECHLCKAACESGKSIEVKHDGPC 46
KAZAL_FS cd00104
Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit ...
725-759 2.27e-08

Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the cognate enzyme as substrate. The reactive site peptide bond is a combining loop which has an identical conformation in all Kazal inhibitors and in all enzyme/inhibitor complexes. These Kazal domains (small hydrophobic core of alpha/beta structure with 3 to 4 disulfide bonds) often occur in tandem arrays. Similar domains are also present in follistatin (FS) and follistatin-like family members, which play an important role in tissue specific regulation. The FS domain consists of an N-terminal beta hairpin (FOLN/EGF-like domain) and a Kazal-like domain and has five disulfide bonds. Although the Kazal-like FS substructure is similar to Kazal proteinase inhibitors, no FS domain has yet been shown to be a proteinase inhibitor. Follistatin-like family members include SPARC, also known as, BM-40 or osteonectin, the Gallus gallus Flik protein, as well as, agrin which has a long array of FS domains. The kazal-type inhibitor domain has also been detected in an extracellular loop region of solute carrier 21 (SLC21) family members (organic anion transporters) , which may regulate the specificity of anion uptake. The distant homolog, Ascidian trypsin inhibitor, is included in this CD.


Pssm-ID: 238052 [Multi-domain]  Cd Length: 41  Bit Score: 51.89  E-value: 2.27e-08
                           10        20        30
                   ....*....|....*....|....*....|....*
gi 2043849250  725 PVCGSDGVTYANECQLKKTRCEKRQELFVTSQGAC 759
Cdd:cd00104      7 PVCGSDGKTYSNECHLGCAACRSGRSITVAHNGPC 41
KAZAL smart00280
Kazal type serine protease inhibitors; Kazal type serine protease inhibitors and ...
430-470 3.50e-08

Kazal type serine protease inhibitors; Kazal type serine protease inhibitors and follistatin-like domains.


Pssm-ID: 197624  Cd Length: 46  Bit Score: 51.14  E-value: 3.50e-08
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|.
gi 2043849250   430 CDGAFRPLCGGDGRTYGSDCQRRRAECLRQAGIAVRHRGPC 470
Cdd:smart00280    6 CPREYDPVCGSDGVTYSNECHLCKAACESGKSIEVKHDGPC 46
KAZAL_FS cd00104
Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit ...
936-977 5.64e-08

Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the cognate enzyme as substrate. The reactive site peptide bond is a combining loop which has an identical conformation in all Kazal inhibitors and in all enzyme/inhibitor complexes. These Kazal domains (small hydrophobic core of alpha/beta structure with 3 to 4 disulfide bonds) often occur in tandem arrays. Similar domains are also present in follistatin (FS) and follistatin-like family members, which play an important role in tissue specific regulation. The FS domain consists of an N-terminal beta hairpin (FOLN/EGF-like domain) and a Kazal-like domain and has five disulfide bonds. Although the Kazal-like FS substructure is similar to Kazal proteinase inhibitors, no FS domain has yet been shown to be a proteinase inhibitor. Follistatin-like family members include SPARC, also known as, BM-40 or osteonectin, the Gallus gallus Flik protein, as well as, agrin which has a long array of FS domains. The kazal-type inhibitor domain has also been detected in an extracellular loop region of solute carrier 21 (SLC21) family members (organic anion transporters) , which may regulate the specificity of anion uptake. The distant homolog, Ascidian trypsin inhibitor, is included in this CD.


Pssm-ID: 238052 [Multi-domain]  Cd Length: 41  Bit Score: 50.73  E-value: 5.64e-08
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 2043849250  936 CPEgNATKVCGSDGVTYGDQCQLRTIACRQGQHITVKHVGQC 977
Cdd:cd00104      1 CPK-EYDPVCGSDGKTYSNECHLGCAACRSGRSITVAHNGPC 41
Laminin_EGF pfam00053
Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.
855-891 9.82e-08

Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.


Pssm-ID: 395007  Cd Length: 49  Bit Score: 50.04  E-value: 9.82e-08
                           10        20        30
                   ....*....|....*....|....*....|....*..
gi 2043849250  855 CGCDPVGSVRDDCEQMSGLCSCRPGISGMKCSRCPAG 891
Cdd:pfam00053    1 CDCNPHGSLSDTCDPETGQCLCKPGVTGRHCDRCKPG 37
KAZAL_FS cd00104
Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit ...
281-326 1.79e-07

Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the cognate enzyme as substrate. The reactive site peptide bond is a combining loop which has an identical conformation in all Kazal inhibitors and in all enzyme/inhibitor complexes. These Kazal domains (small hydrophobic core of alpha/beta structure with 3 to 4 disulfide bonds) often occur in tandem arrays. Similar domains are also present in follistatin (FS) and follistatin-like family members, which play an important role in tissue specific regulation. The FS domain consists of an N-terminal beta hairpin (FOLN/EGF-like domain) and a Kazal-like domain and has five disulfide bonds. Although the Kazal-like FS substructure is similar to Kazal proteinase inhibitors, no FS domain has yet been shown to be a proteinase inhibitor. Follistatin-like family members include SPARC, also known as, BM-40 or osteonectin, the Gallus gallus Flik protein, as well as, agrin which has a long array of FS domains. The kazal-type inhibitor domain has also been detected in an extracellular loop region of solute carrier 21 (SLC21) family members (organic anion transporters) , which may regulate the specificity of anion uptake. The distant homolog, Ascidian trypsin inhibitor, is included in this CD.


Pssm-ID: 238052 [Multi-domain]  Cd Length: 41  Bit Score: 49.19  E-value: 1.79e-07
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 2043849250  281 CPSSCggvaeSPVCGSDGRDYRSLCHLQKHACDAQQDLAKQFDGPC 326
Cdd:cd00104      1 CPKEY-----DPVCGSDGKTYSNECHLGCAACRSGRSITVAHNGPC 41
KAZAL_FS cd00104
Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit ...
358-398 4.59e-07

Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the cognate enzyme as substrate. The reactive site peptide bond is a combining loop which has an identical conformation in all Kazal inhibitors and in all enzyme/inhibitor complexes. These Kazal domains (small hydrophobic core of alpha/beta structure with 3 to 4 disulfide bonds) often occur in tandem arrays. Similar domains are also present in follistatin (FS) and follistatin-like family members, which play an important role in tissue specific regulation. The FS domain consists of an N-terminal beta hairpin (FOLN/EGF-like domain) and a Kazal-like domain and has five disulfide bonds. Although the Kazal-like FS substructure is similar to Kazal proteinase inhibitors, no FS domain has yet been shown to be a proteinase inhibitor. Follistatin-like family members include SPARC, also known as, BM-40 or osteonectin, the Gallus gallus Flik protein, as well as, agrin which has a long array of FS domains. The kazal-type inhibitor domain has also been detected in an extracellular loop region of solute carrier 21 (SLC21) family members (organic anion transporters) , which may regulate the specificity of anion uptake. The distant homolog, Ascidian trypsin inhibitor, is included in this CD.


Pssm-ID: 238052 [Multi-domain]  Cd Length: 41  Bit Score: 48.04  E-value: 4.59e-07
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 2043849250  358 CPPGSGPVCGDDGVTYESECAMGRAGAIRGIDIQKVRSGQC 398
Cdd:cd00104      1 CPKEYDPVCGSDGKTYSNECHLGCAACRSGRSITVAHNGPC 41
Kazal_2 pfam07648
Kazal-type serine protease inhibitor domain; Usually indicative of serine protease inhibitors. ...
628-674 5.44e-07

Kazal-type serine protease inhibitor domain; Usually indicative of serine protease inhibitors. However, kazal-like domains are also seen in the extracellular part of agrins, which are not known to be protease inhibitors. Kazal domains often occur in tandem arrays. Small alpha+beta fold containing three disulphides.


Pssm-ID: 400135  Cd Length: 50  Bit Score: 48.26  E-value: 5.44e-07
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|
gi 2043849250  628 CLCPRCErqpPAPVCGSDGVTYPSPCQLQVASCQLQKSIQVART---GPC 674
Cdd:pfam07648    4 CQCPKTE---YEPVCGSDGVTYPSPCALCAAGCKLGKEVKEEKVkydGSC 50
Kazal_2 pfam07648
Kazal-type serine protease inhibitor domain; Usually indicative of serine protease inhibitors. ...
714-759 9.90e-07

Kazal-type serine protease inhibitor domain; Usually indicative of serine protease inhibitors. However, kazal-like domains are also seen in the extracellular part of agrins, which are not known to be protease inhibitors. Kazal domains often occur in tandem arrays. Small alpha+beta fold containing three disulphides.


Pssm-ID: 400135  Cd Length: 50  Bit Score: 47.49  E-value: 9.90e-07
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*....
gi 2043849250  714 CDFTCAAAPRAPVCGSDGVTYANECQLKKTRCEKRQELFVT---SQGAC 759
Cdd:pfam07648    2 CNCQCPKTEYEPVCGSDGVTYPSPCALCAAGCKLGKEVKEEkvkYDGSC 50
EGF_Lam cd00055
Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous ...
854-891 1.63e-06

Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies


Pssm-ID: 238012  Cd Length: 50  Bit Score: 46.58  E-value: 1.63e-06
                           10        20        30
                   ....*....|....*....|....*....|....*...
gi 2043849250  854 PCGCDPVGSVRDDCEQMSGLCSCRPGISGMKCSRCPAG 891
Cdd:cd00055      1 PCDCNGHGSLSGQCDPGTGQCECKPNTTGRRCDRCAPG 38
Kazal_1 pfam00050
Kazal-type serine protease inhibitor domain; Usually indicative of serine protease inhibitors. ...
357-398 1.84e-06

Kazal-type serine protease inhibitor domain; Usually indicative of serine protease inhibitors. However, kazal-like domains are also seen in the extracellular part of agrins, which are not known to be protease inhibitors. Kazal domains often occur in tandem arrays. Small alpha+beta fold containing three disulphides. Alignment also includes a single domain from transporters in the OATP/PGT family.


Pssm-ID: 395004  Cd Length: 49  Bit Score: 46.51  E-value: 1.84e-06
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 2043849250  357 DCPPGSGPVCGDDGVTYESECAMGRAGAIRGIDIQKVRSGQC 398
Cdd:pfam00050    8 ACPRIYDPVCGTDGKTYSNECLFCAENGKRGTNLHKVHDGEC 49
EGF_CA cd00054
Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular ...
1865-1897 5.15e-06

Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.


Pssm-ID: 238011  Cd Length: 38  Bit Score: 44.94  E-value: 5.15e-06
                           10        20        30
                   ....*....|....*....|....*....|...
gi 2043849250 1865 QEPNPCQPGGTCQPSMAGYQCSCHAGFAGARCE 1897
Cdd:cd00054      6 ASGNPCQNGGTCVNTVGSYRCSCPPGYTGRNCE 38
EGF_Lam smart00180
Laminin-type epidermal growth factor-like domai;
855-891 7.75e-06

Laminin-type epidermal growth factor-like domai;


Pssm-ID: 214543  Cd Length: 46  Bit Score: 44.61  E-value: 7.75e-06
                            10        20        30
                    ....*....|....*....|....*....|....*..
gi 2043849250   855 CGCDPVGSVRDDCEQMSGLCSCRPGISGMKCSRCPAG 891
Cdd:smart00180    1 CDCDPGGSASGTCDPDTGQCECKPNVTGRRCDRCAPG 37
Kazal_2 pfam07648
Kazal-type serine protease inhibitor domain; Usually indicative of serine protease inhibitors. ...
499-544 2.48e-05

Kazal-type serine protease inhibitor domain; Usually indicative of serine protease inhibitors. However, kazal-like domains are also seen in the extracellular part of agrins, which are not known to be protease inhibitors. Kazal domains often occur in tandem arrays. Small alpha+beta fold containing three disulphides.


Pssm-ID: 400135  Cd Length: 50  Bit Score: 43.25  E-value: 2.48e-05
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|
gi 2043849250  499 ECQQQCQG-RYDPVCGTDQRTYGSPCELHAMACLLQRDIG---LRHRGPC 544
Cdd:pfam07648    1 NCNCQCPKtEYEPVCGSDGVTYPSPCALCAAGCKLGKEVKeekVKYDGSC 50
Kazal_2 pfam07648
Kazal-type serine protease inhibitor domain; Usually indicative of serine protease inhibitors. ...
216-251 3.89e-05

Kazal-type serine protease inhibitor domain; Usually indicative of serine protease inhibitors. However, kazal-like domains are also seen in the extracellular part of agrins, which are not known to be protease inhibitors. Kazal domains often occur in tandem arrays. Small alpha+beta fold containing three disulphides.


Pssm-ID: 400135  Cd Length: 50  Bit Score: 42.87  E-value: 3.89e-05
                           10        20        30
                   ....*....|....*....|....*....|....*....
gi 2043849250  216 APVCGSDHSTYSNECELDRAQCNQQRRIK---VVSKGPC 251
Cdd:pfam07648   12 EPVCGSDGVTYPSPCALCAAGCKLGKEVKeekVKYDGSC 50
Kazal_2 pfam07648
Kazal-type serine protease inhibitor domain; Usually indicative of serine protease inhibitors. ...
281-326 7.90e-05

Kazal-type serine protease inhibitor domain; Usually indicative of serine protease inhibitors. However, kazal-like domains are also seen in the extracellular part of agrins, which are not known to be protease inhibitors. Kazal domains often occur in tandem arrays. Small alpha+beta fold containing three disulphides.


Pssm-ID: 400135  Cd Length: 50  Bit Score: 42.09  E-value: 7.90e-05
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*....
gi 2043849250  281 CPSSCGGVAESPVCGSDGRDYRSLCHLQKHACDAQQDLAKQF---DGPC 326
Cdd:pfam07648    2 CNCQCPKTEYEPVCGSDGVTYPSPCALCAAGCKLGKEVKEEKvkyDGSC 50
EGF_CA smart00179
Calcium-binding EGF-like domain;
1865-1897 1.14e-04

Calcium-binding EGF-like domain;


Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 41.08  E-value: 1.14e-04
                            10        20        30
                    ....*....|....*....|....*....|....
gi 2043849250  1865 QEPNPCQPGGTCQPSMAGYQCSCHAGF-AGARCE 1897
Cdd:smart00179    6 ASGNPCQNGGTCVNTVGSYRCECPPGYtDGRNCE 39
PHA03378 PHA03378
EBNA-3B; Provisional
1292-1362 5.41e-04

EBNA-3B; Provisional


Pssm-ID: 223065 [Multi-domain]  Cd Length: 991  Bit Score: 45.06  E-value: 5.41e-04
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2043849250 1292 AAPGSARRVPAATAALGQPVGSPGQPVGTAGTAGHPGHPVGTVGSPGEPVGTTGTARSPAGTAGSSRGAPP 1362
Cdd:PHA03378   709 APPGRAQRPAAATGRARPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGAPTPQPP 779
EGF_CA cd00054
Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular ...
1381-1408 8.19e-04

Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.


Pssm-ID: 238011  Cd Length: 38  Bit Score: 38.77  E-value: 8.19e-04
                           10        20
                   ....*....|....*....|....*...
gi 2043849250 1381 CRHGGTCRDDGHGFTCSCPAGTAGTTCE 1408
Cdd:cd00054     11 CQNGGTCVNTVGSYRCSCPPGYTGRNCE 38
Kazal_2 pfam07648
Kazal-type serine protease inhibitor domain; Usually indicative of serine protease inhibitors. ...
936-977 1.09e-03

Kazal-type serine protease inhibitor domain; Usually indicative of serine protease inhibitors. However, kazal-like domains are also seen in the extracellular part of agrins, which are not known to be protease inhibitors. Kazal domains often occur in tandem arrays. Small alpha+beta fold containing three disulphides.


Pssm-ID: 400135  Cd Length: 50  Bit Score: 38.63  E-value: 1.09e-03
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*
gi 2043849250  936 CPEGNATKVCGSDGVTYGDQCQLRTIACRQG---QHITVKHVGQC 977
Cdd:pfam07648    6 CPKTEYEPVCGSDGVTYPSPCALCAAGCKLGkevKEEKVKYDGSC 50
EGF pfam00008
EGF-like domain; There is no clear separation between noise and signal. pfam00053 is very ...
1594-1625 1.23e-03

EGF-like domain; There is no clear separation between noise and signal. pfam00053 is very similar, but has 8 instead of 6 conserved cysteines. Includes some cytokine receptors. The EGF domain misses the N-terminus regions of the Ca2+ binding EGF domains (this is the main reason of discrepancy between swiss-prot domain start/end and Pfam). The family is hard to model due to many similar but different sub-types of EGF domains. Pfam certainly misses a number of EGF domains.


Pssm-ID: 394967  Cd Length: 31  Bit Score: 38.13  E-value: 1.23e-03
                           10        20        30
                   ....*....|....*....|....*....|..
gi 2043849250 1594 CQPNPCHHGGTCQpRDADAFQCQCPEAYAGPT 1625
Cdd:pfam00008    1 CAPNPCSNGGTCV-DTPGGYTCICPEGYTGKR 31
Kazal_2 pfam07648
Kazal-type serine protease inhibitor domain; Usually indicative of serine protease inhibitors. ...
562-601 2.81e-03

Kazal-type serine protease inhibitor domain; Usually indicative of serine protease inhibitors. However, kazal-like domains are also seen in the extracellular part of agrins, which are not known to be protease inhibitors. Kazal domains often occur in tandem arrays. Small alpha+beta fold containing three disulphides.


Pssm-ID: 400135  Cd Length: 50  Bit Score: 37.47  E-value: 2.81e-03
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|
gi 2043849250  562 RCVCPTecvPSAQPVCGSDGNTYGSECELHVRACTQQENI 601
Cdd:pfam07648    3 NCQCPK---TEYEPVCGSDGVTYPSPCALCAAGCKLGKEV 39
EGF_CA cd00054
Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular ...
1595-1626 5.81e-03

Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.


Pssm-ID: 238011  Cd Length: 38  Bit Score: 36.46  E-value: 5.81e-03
                           10        20        30
                   ....*....|....*....|....*....|..
gi 2043849250 1595 QPNPCHHGGTCQPRDADaFQCQCPEAYAGPTC 1626
Cdd:cd00054      7 SGNPCQNGGTCVNTVGS-YRCSCPPGYTGRNC 37
 
Name Accession Description Interval E-value
NtA pfam03146
Agrin NtA domain; Agrin is a multidomain heparan sulphate proteoglycan, that is a key ...
33-148 1.14e-49

Agrin NtA domain; Agrin is a multidomain heparan sulphate proteoglycan, that is a key organizer for the induction of postsynaptic specializations at the neuromuscular junction. Binding of agrin to basement membranes requires the amino terminal (NtA) domain. This region mediates high affinity interaction with the coiled-coil domain of laminins. The binding of agrin to laminins via the NtA domain is subject to tissue-specific regulation. The NtA domain-containing form of agrin is expressed in non-neuronal cells or in neurons that project to non-neuronal cell such as motor neurons. The structure of this domain is an OB-fold.


Pssm-ID: 460825  Cd Length: 109  Bit Score: 171.81  E-value: 1.14e-49
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2043849250   33 CPERELQRREEEANVVLTGTVEEIMNVDPVHHTYSCKVRVWRYLKGKDIVTHEILLDGGNKVVIGGFGDPLICDNQVATG 112
Cdd:pfam03146    1 CPDRTLEEREEEANVVLTGTVEEVMNVDPDGKTYSASVRVKRVMKGKSLLTQLILLDGGNKVTVDGLGDPLICDSQVRRG 80
                           90       100       110
                   ....*....|....*....|....*....|....*.
gi 2043849250  113 DTRIFFVNPAPQalwpahrNELMLNSSLMRITLRNL 148
Cdd:pfam03146   81 DTRIFFLNPAPD-------GELRLNSSLVRITLRNL 109
LamG cd00110
Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have ...
1417-1567 9.10e-44

Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of purposes including signal transduction via cell-surface steroid receptors, adhesion, migration and differentiation through mediation of cell adhesion molecules.


Pssm-ID: 238058 [Multi-domain]  Cd Length: 151  Bit Score: 156.42  E-value: 9.10e-44
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2043849250 1417 RFGGGSVLALRTLRA-YHTLRVALEFRALEPAGLLLYNAQRHGKDFIALALRGGLVQLRFDTGSGTGTVTSRVPVEPGRW 1495
Cdd:cd00110      3 SFSGSSYVRLPTLPApRTRLSISFSFRTTSPNGLLLYAGSQNGGDFLALELEDGRLVLRYDLGSGSLVLSSKTPLNDGQW 82
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2043849250 1496 HRLLVTRNRRTGTLAVDGEPPVSGHSPPGTDGLNLDTELFIGGVPEEHRALafeRTGVAGGLRGCVRALSIN 1567
Cdd:cd00110     83 HSVSVERNGRSVTLSVDGERVVESGSPGGSALLNLDGPLYLGGLPEDLKSP---GLPVSPGFVGCIRDLKVN 151
Laminin_G_1 pfam00054
Laminin G domain;
1941-2072 8.30e-41

Laminin G domain;


Pssm-ID: 395008 [Multi-domain]  Cd Length: 131  Bit Score: 147.46  E-value: 8.30e-41
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2043849250 1941 IKTEATQGLLLWSGKGLQRsDYIALAIVDGHVQLSYDLGSKGVTLRSSVPVNTNQWVRIRASRVQREGSLQVGNEAPIAG 2020
Cdd:pfam00054    1 FRTTEPSGLLLYNGTQTER-DFLALELRDGRLEVSYDLGSGAAVVRSGDKLNDGKWHSVELERNGRSGTLSVDGEARPTG 79
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|...
gi 2043849250 2021 SSPLGATQ-LDTDGALWLGGLDKPSVPQRlPKAFSTGFVGCMRDVLVDRRELH 2072
Cdd:pfam00054   80 ESPLGATTdLDVDGPLYVGGLPSLGVKKR-RLAISPSFDGCIRDVIVNGKPLD 131
LamG smart00282
Laminin G domain;
1436-1569 1.17e-40

Laminin G domain;


Pssm-ID: 214598 [Multi-domain]  Cd Length: 132  Bit Score: 147.10  E-value: 1.17e-40
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2043849250  1436 RVALEFRALEPAGLLLYNAQRHGKDFIALALRGGLVQLRFDTGSGTGTVTS-RVPVEPGRWHRLLVTRNRRTGTLAVDGE 1514
Cdd:smart00282    1 SISFSFRTTSPNGLLLYAGSKGGGDYLALELRDGRLVLRYDLGSGPARLTSdPTPLNDGQWHRVAVERNGRSVTLSVDGG 80
                            90       100       110       120       130
                    ....*....|....*....|....*....|....*....|....*....|....*
gi 2043849250  1515 PPVSGHSPPGTDGLNLDTELFIGGVPEEHRAlafERTGVAGGLRGCVRALSINNR 1569
Cdd:smart00282   81 NRVSGESPGGLTILNLDGPLYLGGLPEDLKL---PPLPVTPGFRGCIRNLKVNGK 132
Laminin_G_1 pfam00054
Laminin G domain;
1711-1844 6.20e-39

Laminin G domain;


Pssm-ID: 395008 [Multi-domain]  Cd Length: 131  Bit Score: 142.07  E-value: 6.20e-39
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2043849250 1711 ARRPRGLILYNGQRSDGggDFVSLALHGGHLEFRFDLGKGPALLRSREPVPLDTWVSVRLERSGRKGVLRVNGGPAVTGE 1790
Cdd:pfam00054    3 TTEPSGLLLYNGTQTER--DFLALELRDGRLEVSYDLGSGAAVVRSGDKLNDGKWHSVELERNGRSGTLSVDGEARPTGE 80
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....
gi 2043849250 1791 SPKSRKvphMVLNLKEPLYLGGAPDFSRLARAAAVSSGFEGALQKVLVDGVPVL 1844
Cdd:pfam00054   81 SPLGAT---TDLDVDGPLYVGGLPSLGVKKRRLAISPSFDGCIRDVIVNGKPLD 131
Laminin_G_1 pfam00054
Laminin G domain;
1441-1569 6.57e-39

Laminin G domain;


Pssm-ID: 395008 [Multi-domain]  Cd Length: 131  Bit Score: 142.07  E-value: 6.57e-39
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2043849250 1441 FRALEPAGLLLYNAQRHGKDFIALALRGGLVQLRFDTGSGTGTVTSRVPVEPGRWHRLLVTRNRRTGTLAVDGEPPVSGH 1520
Cdd:pfam00054    1 FRTTEPSGLLLYNGTQTERDFLALELRDGRLEVSYDLGSGAAVVRSGDKLNDGKWHSVELERNGRSGTLSVDGEARPTGE 80
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|
gi 2043849250 1521 SPPGTDG-LNLDTELFIGGVPEEhrALAFERTGVAGGLRGCVRALSINNR 1569
Cdd:pfam00054   81 SPLGATTdLDVDGPLYVGGLPSL--GVKKRRLAISPSFDGCIRDVIVNGK 128
LamG cd00110
Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have ...
1910-2067 5.43e-38

Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of purposes including signal transduction via cell-surface steroid receptors, adhesion, migration and differentiation through mediation of cell adhesion molecules.


Pssm-ID: 238058 [Multi-domain]  Cd Length: 151  Bit Score: 140.25  E-value: 5.43e-38
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2043849250 1910 AVAFDGRTYLEFhnavTRSEKALQSNHFELSIKTEATQGLLLWSGkGLQRSDYIALAIVDGHVQLSYDLGSKGVTLRSSV 1989
Cdd:cd00110      1 GVSFSGSSYVRL----PTLPAPRTRLSISFSFRTTSPNGLLLYAG-SQNGGDFLALELEDGRLVLRYDLGSGSLVLSSKT 75
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2043849250 1990 PVNTNQWVRIRASRVQREGSLQVGNEAPIAGSSPLGATQLDTDGALWLGGLdkPSVPQRLPKAFSTGFVGCMRDVLVD 2067
Cdd:cd00110     76 PLNDGQWHSVSVERNGRSVTLSVDGERVVESGSPGGSALLNLDGPLYLGGL--PEDLKSPGLPVSPGFVGCIRDLKVN 151
LamG smart00282
Laminin G domain;
1936-2069 1.37e-35

Laminin G domain;


Pssm-ID: 214598 [Multi-domain]  Cd Length: 132  Bit Score: 132.46  E-value: 1.37e-35
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2043849250  1936 HFELSIKTEATQGLLLWSGkGLQRSDYIALAIVDGHVQLSYDLGSKGVTLRSS-VPVNTNQWVRIRASRVQREGSLQVGN 2014
Cdd:smart00282    1 SISFSFRTTSPNGLLLYAG-SKGGGDYLALELRDGRLVLRYDLGSGPARLTSDpTPLNDGQWHRVAVERNGRSVTLSVDG 79
                            90       100       110       120       130
                    ....*....|....*....|....*....|....*....|....*....|....*
gi 2043849250  2015 EAPIAGSSPLGATQLDTDGALWLGGLdkPSVPQRLPKAFSTGFVGCMRDVLVDRR 2069
Cdd:smart00282   80 GNRVSGESPGGLTILNLDGPLYLGGL--PEDLKLPPLPVTPGFRGCIRNLKVNGK 132
LamG cd00110
Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have ...
1681-1839 3.25e-34

Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of purposes including signal transduction via cell-surface steroid receptors, adhesion, migration and differentiation through mediation of cell adhesion molecules.


Pssm-ID: 238058 [Multi-domain]  Cd Length: 151  Bit Score: 129.46  E-value: 3.25e-34
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2043849250 1681 FSGSSYLELPGLQSFvpglPDRMSLDLVLLARRPRGLILYNGqrSDGGGDFVSLALHGGHLEFRFDLGKGPALLRSREPV 1760
Cdd:cd00110      4 FSGSSYVRLPTLPAP----RTRLSISFSFRTTSPNGLLLYAG--SQNGGDFLALELEDGRLVLRYDLGSGSLVLSSKTPL 77
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2043849250 1761 PLDTWVSVRLERSGRKGVLRVNGGPAVTGESPKSrkvpHMVLNLKEPLYLGGAPDFSRLaRAAAVSSGFEGALQKVLVD 1839
Cdd:cd00110     78 NDGQWHSVSVERNGRSVTLSVDGERVVESGSPGG----SALLNLDGPLYLGGLPEDLKS-PGLPVSPGFVGCIRDLKVN 151
Laminin_G_2 pfam02210
Laminin G domain; This family includes the Thrombospondin N-terminal-like domain, a Laminin G ...
1441-1569 2.22e-31

Laminin G domain; This family includes the Thrombospondin N-terminal-like domain, a Laminin G subfamily.


Pssm-ID: 460494 [Multi-domain]  Cd Length: 126  Bit Score: 120.22  E-value: 2.22e-31
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2043849250 1441 FRALEPAGLLLYNAQrHGKDFIALALRGGLVQLRFDTGSGTGTVTS-RVPVEPGRWHRLLVTRNRRTGTLAVDGEPPVSG 1519
Cdd:pfam02210    1 FRTRQPNGLLLYAGG-GGSDFLALELVNGRLVLRYDLGSGPESLLSsGKNLNDGQWHSVRVERNGNTLTLSVDGQTVVSS 79
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|
gi 2043849250 1520 HSPPGTDGLNLDTELFIGGVPEEHRalaFERTGVAGGLRGCVRALSINNR 1569
Cdd:pfam02210   80 LPPGESLLLNLNGPLYLGGLPPLLL---LPALPVRAGFVGCIRDVRVNGE 126
LamG smart00282
Laminin G domain;
1704-1841 2.67e-30

Laminin G domain;


Pssm-ID: 214598 [Multi-domain]  Cd Length: 132  Bit Score: 117.44  E-value: 2.67e-30
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2043849250  1704 SLDLVLLARRPRGLILYNGqrSDGGGDFVSLALHGGHLEFRFDLGKGPALLRS-REPVPLDTWVSVRLERSGRKGVLRVN 1782
Cdd:smart00282    1 SISFSFRTTSPNGLLLYAG--SKGGGDYLALELRDGRLVLRYDLGSGPARLTSdPTPLNDGQWHRVAVERNGRSVTLSVD 78
                            90       100       110       120       130
                    ....*....|....*....|....*....|....*....|....*....|....*....
gi 2043849250  1783 GGPAVTGESPKSRKvphmVLNLKEPLYLGGAPDFSRLaRAAAVSSGFEGALQKVLVDGV 1841
Cdd:smart00282   79 GGNRVSGESPGGLT----ILNLDGPLYLGGLPEDLKL-PPLPVTPGFRGCIRNLKVNGK 132
Laminin_G_2 pfam02210
Laminin G domain; This family includes the Thrombospondin N-terminal-like domain, a Laminin G ...
1941-2069 2.98e-27

Laminin G domain; This family includes the Thrombospondin N-terminal-like domain, a Laminin G subfamily.


Pssm-ID: 460494 [Multi-domain]  Cd Length: 126  Bit Score: 108.28  E-value: 2.98e-27
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2043849250 1941 IKTEATQGLLLWSGKGlqRSDYIALAIVDGHVQLSYDLGSKGVTLRSS-VPVNTNQWVRIRASRVQREGSLQVGNEAPIA 2019
Cdd:pfam02210    1 FRTRQPNGLLLYAGGG--GSDFLALELVNGRLVLRYDLGSGPESLLSSgKNLNDGQWHSVRVERNGNTLTLSVDGQTVVS 78
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|
gi 2043849250 2020 GSSPLGATQLDTDGALWLGGLDKPSVPQRLPkaFSTGFVGCMRDVLVDRR 2069
Cdd:pfam02210   79 SLPPGESLLLNLNGPLYLGGLPPLLLLPALP--VRAGFVGCIRDVRVNGE 126
SEA smart00200
Domain found in sea urchin sperm protein, enterokinase, agrin; Proposed function of regulating ...
1153-1275 1.50e-25

Domain found in sea urchin sperm protein, enterokinase, agrin; Proposed function of regulating or binding carbohydrate sidechains.


Pssm-ID: 214554  Cd Length: 121  Bit Score: 103.26  E-value: 1.50e-25
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2043849250  1153 ATKVFQGVLILEEVEGQELFYTPEMADPKSELFGETARSIESALDELFRGSEVRRDFRSVRVRDLGQSSAVRVIVEAHFD 1232
Cdd:smart00200    1 PTQSFGVSLSVLSVEGENLQYSPSLEDPSSEEYQELVRDVEKLLEQIYGKTDLKPDFVGTEVIEFRNGSVVVDLGLLFNE 80
                            90       100       110       120
                    ....*....|....*....|....*....|....*....|...
gi 2043849250  1233 PATsyTAADIQGALLKQLRAARRkTILVKKpqQEHIKFMDFDW 1275
Cdd:smart00200   81 GVT--NGQDVEEDLLQVIKQAAY-SLKITN--VNVVDVLDPDS 118
Laminin_G_2 pfam02210
Laminin G domain; This family includes the Thrombospondin N-terminal-like domain, a Laminin G ...
1712-1841 2.76e-22

Laminin G domain; This family includes the Thrombospondin N-terminal-like domain, a Laminin G subfamily.


Pssm-ID: 460494 [Multi-domain]  Cd Length: 126  Bit Score: 94.41  E-value: 2.76e-22
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2043849250 1712 RRPRGLILYNGqrsDGGGDFVSLALHGGHLEFRFDLGKGPALLRS-REPVPLDTWVSVRLERSGRKGVLRVNGGPAVTGE 1790
Cdd:pfam02210    4 RQPNGLLLYAG---GGGSDFLALELVNGRLVLRYDLGSGPESLLSsGKNLNDGQWHSVRVERNGNTLTLSVDGQTVVSSL 80
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|.
gi 2043849250 1791 SPKsrkvPHMVLNLKEPLYLGGAPDFSRLaRAAAVSSGFEGALQKVLVDGV 1841
Cdd:pfam02210   81 PPG----ESLLLNLNGPLYLGGLPPLLLL-PALPVRAGFVGCIRDVRVNGE 126
EGF_Lam cd00055
Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous ...
800-841 7.57e-14

Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies


Pssm-ID: 238012  Cd Length: 50  Bit Score: 67.38  E-value: 7.57e-14
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 2043849250  800 SCQCNPHGSYGGSCEPGSGQCSCKPGVGGLRCDRCEPGFWNF 841
Cdd:cd00055      1 PCDCNGHGSLSGQCDPGTGQCECKPNTTGRRCDRCAPGYYGL 42
SEA pfam01390
SEA domain; Domain found in Sea urchin sperm protein, Enterokinase, Agrin (SEA). Proposed ...
1171-1257 1.15e-13

SEA domain; Domain found in Sea urchin sperm protein, Enterokinase, Agrin (SEA). Proposed function of regulating or binding carbohydrate side chains. Recently a proteolytic activity has been shown for a SEA domain.


Pssm-ID: 460188  Cd Length: 100  Bit Score: 68.80  E-value: 1.15e-13
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2043849250 1171 LFYTPEMADPKSELFGETARSIESALDELFRGSEVRRDFRSVRVRDLGQSS-AVRVIVEAHFDPATSYTAADIQGALLKQ 1249
Cdd:pfam01390   12 LQYTPDLGNPSSQEFKSLSRRIESLLNELFRNSSLRKQYIKSHVLRLRPDGgSVVVDVVLVFRFPSTEPALDREKLIEEI 91

                   ....*...
gi 2043849250 1250 LRAARRKT 1257
Cdd:pfam01390   92 LRQTLNNT 99
Laminin_EGF pfam00053
Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.
801-843 1.31e-13

Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.


Pssm-ID: 395007  Cd Length: 49  Bit Score: 66.61  E-value: 1.31e-13
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|...
gi 2043849250  801 CQCNPHGSYGGSCEPGSGQCSCKPGVGGLRCDRCEPGFWNFRG 843
Cdd:pfam00053    1 CDCNPHGSLSDTCDPETGQCLCKPGVTGRHCDRCKPGYYGLPS 43
KAZAL smart00280
Kazal type serine protease inhibitors; Kazal type serine protease inhibitors and ...
564-609 1.97e-13

Kazal type serine protease inhibitors; Kazal type serine protease inhibitors and follistatin-like domains.


Pssm-ID: 197624  Cd Length: 46  Bit Score: 66.16  E-value: 1.97e-13
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*.
gi 2043849250   564 VCPTECVPSAQPVCGSDGNTYGSECELHVRACTQQENILVAAQGPC 609
Cdd:smart00280    1 DCPEACPREYDPVCGSDGVTYSNECHLCKAACESGKSIEVKHDGPC 46
EGF_Lam smart00180
Laminin-type epidermal growth factor-like domai;
801-843 9.04e-13

Laminin-type epidermal growth factor-like domai;


Pssm-ID: 214543  Cd Length: 46  Bit Score: 64.25  E-value: 9.04e-13
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 2043849250   801 CQCNPHGSYGGSCEPGSGQCSCKPGVGGLRCDRCEPGFWNFRG 843
Cdd:smart00180    1 CDCDPGGSASGTCDPDTGQCECKPNVTGRRCDRCAPGYYGDGP 43
KAZAL smart00280
Kazal type serine protease inhibitors; Kazal type serine protease inhibitors and ...
499-544 4.12e-12

Kazal type serine protease inhibitors; Kazal type serine protease inhibitors and follistatin-like domains.


Pssm-ID: 197624  Cd Length: 46  Bit Score: 62.31  E-value: 4.12e-12
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*.
gi 2043849250   499 ECQQQCQGRYDPVCGTDQRTYGSPCELHAMACLLQRDIGLRHRGPC 544
Cdd:smart00280    1 DCPEACPREYDPVCGSDGVTYSNECHLCKAACESGKSIEVKHDGPC 46
KAZAL smart00280
Kazal type serine protease inhibitors; Kazal type serine protease inhibitors and ...
713-759 2.79e-11

Kazal type serine protease inhibitors; Kazal type serine protease inhibitors and follistatin-like domains.


Pssm-ID: 197624  Cd Length: 46  Bit Score: 60.00  E-value: 2.79e-11
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*..
gi 2043849250   713 VCDFTCAAAPRaPVCGSDGVTYANECQLKKTRCEKRQELFVTSQGAC 759
Cdd:smart00280    1 DCPEACPREYD-PVCGSDGVTYSNECHLCKAACESGKSIEVKHDGPC 46
KAZAL smart00280
Kazal type serine protease inhibitors; Kazal type serine protease inhibitors and ...
630-674 5.82e-11

Kazal type serine protease inhibitors; Kazal type serine protease inhibitors and follistatin-like domains.


Pssm-ID: 197624  Cd Length: 46  Bit Score: 59.23  E-value: 5.82e-11
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*
gi 2043849250   630 CPRCERQPPAPVCGSDGVTYPSPCQLQVASCQLQKSIQVARTGPC 674
Cdd:smart00280    2 CPEACPREYDPVCGSDGVTYSNECHLCKAACESGKSIEVKHDGPC 46
KAZAL_FS cd00104
Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit ...
504-544 1.43e-10

Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the cognate enzyme as substrate. The reactive site peptide bond is a combining loop which has an identical conformation in all Kazal inhibitors and in all enzyme/inhibitor complexes. These Kazal domains (small hydrophobic core of alpha/beta structure with 3 to 4 disulfide bonds) often occur in tandem arrays. Similar domains are also present in follistatin (FS) and follistatin-like family members, which play an important role in tissue specific regulation. The FS domain consists of an N-terminal beta hairpin (FOLN/EGF-like domain) and a Kazal-like domain and has five disulfide bonds. Although the Kazal-like FS substructure is similar to Kazal proteinase inhibitors, no FS domain has yet been shown to be a proteinase inhibitor. Follistatin-like family members include SPARC, also known as, BM-40 or osteonectin, the Gallus gallus Flik protein, as well as, agrin which has a long array of FS domains. The kazal-type inhibitor domain has also been detected in an extracellular loop region of solute carrier 21 (SLC21) family members (organic anion transporters) , which may regulate the specificity of anion uptake. The distant homolog, Ascidian trypsin inhibitor, is included in this CD.


Pssm-ID: 238052 [Multi-domain]  Cd Length: 41  Bit Score: 58.05  E-value: 1.43e-10
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 2043849250  504 CQGRYDPVCGTDQRTYGSPCELHAMACLLQRDIGLRHRGPC 544
Cdd:cd00104      1 CPKEYDPVCGSDGKTYSNECHLGCAACRSGRSITVAHNGPC 41
KAZAL smart00280
Kazal type serine protease inhibitors; Kazal type serine protease inhibitors and ...
211-251 1.59e-10

Kazal type serine protease inhibitors; Kazal type serine protease inhibitors and follistatin-like domains.


Pssm-ID: 197624  Cd Length: 46  Bit Score: 58.07  E-value: 1.59e-10
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|.
gi 2043849250   211 CAPVVAPVCGSDHSTYSNECELDRAQCNQQRRIKVVSKGPC 251
Cdd:smart00280    6 CPREYDPVCGSDGVTYSNECHLCKAACESGKSIEVKHDGPC 46
KAZAL_FS cd00104
Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit ...
211-251 2.80e-10

Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the cognate enzyme as substrate. The reactive site peptide bond is a combining loop which has an identical conformation in all Kazal inhibitors and in all enzyme/inhibitor complexes. These Kazal domains (small hydrophobic core of alpha/beta structure with 3 to 4 disulfide bonds) often occur in tandem arrays. Similar domains are also present in follistatin (FS) and follistatin-like family members, which play an important role in tissue specific regulation. The FS domain consists of an N-terminal beta hairpin (FOLN/EGF-like domain) and a Kazal-like domain and has five disulfide bonds. Although the Kazal-like FS substructure is similar to Kazal proteinase inhibitors, no FS domain has yet been shown to be a proteinase inhibitor. Follistatin-like family members include SPARC, also known as, BM-40 or osteonectin, the Gallus gallus Flik protein, as well as, agrin which has a long array of FS domains. The kazal-type inhibitor domain has also been detected in an extracellular loop region of solute carrier 21 (SLC21) family members (organic anion transporters) , which may regulate the specificity of anion uptake. The distant homolog, Ascidian trypsin inhibitor, is included in this CD.


Pssm-ID: 238052 [Multi-domain]  Cd Length: 41  Bit Score: 57.28  E-value: 2.80e-10
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 2043849250  211 CAPVVAPVCGSDHSTYSNECELDRAQCNQQRRIKVVSKGPC 251
Cdd:cd00104      1 CPKEYDPVCGSDGKTYSNECHLGCAACRSGRSITVAHNGPC 41
KAZAL_FS cd00104
Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit ...
630-674 4.15e-10

Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the cognate enzyme as substrate. The reactive site peptide bond is a combining loop which has an identical conformation in all Kazal inhibitors and in all enzyme/inhibitor complexes. These Kazal domains (small hydrophobic core of alpha/beta structure with 3 to 4 disulfide bonds) often occur in tandem arrays. Similar domains are also present in follistatin (FS) and follistatin-like family members, which play an important role in tissue specific regulation. The FS domain consists of an N-terminal beta hairpin (FOLN/EGF-like domain) and a Kazal-like domain and has five disulfide bonds. Although the Kazal-like FS substructure is similar to Kazal proteinase inhibitors, no FS domain has yet been shown to be a proteinase inhibitor. Follistatin-like family members include SPARC, also known as, BM-40 or osteonectin, the Gallus gallus Flik protein, as well as, agrin which has a long array of FS domains. The kazal-type inhibitor domain has also been detected in an extracellular loop region of solute carrier 21 (SLC21) family members (organic anion transporters) , which may regulate the specificity of anion uptake. The distant homolog, Ascidian trypsin inhibitor, is included in this CD.


Pssm-ID: 238052 [Multi-domain]  Cd Length: 41  Bit Score: 56.51  E-value: 4.15e-10
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*
gi 2043849250  630 CPRCERqppaPVCGSDGVTYPSPCQLQVASCQLQKSIQVARTGPC 674
Cdd:cd00104      1 CPKEYD----PVCGSDGKTYSNECHLGCAACRSGRSITVAHNGPC 41
KAZAL_FS cd00104
Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit ...
569-609 5.51e-10

Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the cognate enzyme as substrate. The reactive site peptide bond is a combining loop which has an identical conformation in all Kazal inhibitors and in all enzyme/inhibitor complexes. These Kazal domains (small hydrophobic core of alpha/beta structure with 3 to 4 disulfide bonds) often occur in tandem arrays. Similar domains are also present in follistatin (FS) and follistatin-like family members, which play an important role in tissue specific regulation. The FS domain consists of an N-terminal beta hairpin (FOLN/EGF-like domain) and a Kazal-like domain and has five disulfide bonds. Although the Kazal-like FS substructure is similar to Kazal proteinase inhibitors, no FS domain has yet been shown to be a proteinase inhibitor. Follistatin-like family members include SPARC, also known as, BM-40 or osteonectin, the Gallus gallus Flik protein, as well as, agrin which has a long array of FS domains. The kazal-type inhibitor domain has also been detected in an extracellular loop region of solute carrier 21 (SLC21) family members (organic anion transporters) , which may regulate the specificity of anion uptake. The distant homolog, Ascidian trypsin inhibitor, is included in this CD.


Pssm-ID: 238052 [Multi-domain]  Cd Length: 41  Bit Score: 56.12  E-value: 5.51e-10
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 2043849250  569 CVPSAQPVCGSDGNTYGSECELHVRACTQQENILVAAQGPC 609
Cdd:cd00104      1 CPKEYDPVCGSDGKTYSNECHLGCAACRSGRSITVAHNGPC 41
KAZAL smart00280
Kazal type serine protease inhibitors; Kazal type serine protease inhibitors and ...
280-326 6.97e-10

Kazal type serine protease inhibitors; Kazal type serine protease inhibitors and follistatin-like domains.


Pssm-ID: 197624  Cd Length: 46  Bit Score: 56.15  E-value: 6.97e-10
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*..
gi 2043849250   280 VCPSSCGGVaESPVCGSDGRDYRSLCHLQKHACDAQQDLAKQFDGPC 326
Cdd:smart00280    1 DCPEACPRE-YDPVCGSDGVTYSNECHLCKAACESGKSIEVKHDGPC 46
KAZAL smart00280
Kazal type serine protease inhibitors; Kazal type serine protease inhibitors and ...
930-977 2.77e-09

Kazal type serine protease inhibitors; Kazal type serine protease inhibitors and follistatin-like domains.


Pssm-ID: 197624  Cd Length: 46  Bit Score: 54.61  E-value: 2.77e-09
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*...
gi 2043849250   930 ECPSPlCPEgNATKVCGSDGVTYGDQCQLRTIACRQGQHITVKHVGQC 977
Cdd:smart00280    1 DCPEA-CPR-EYDPVCGSDGVTYSNECHLCKAACESGKSIEVKHDGPC 46
KAZAL_FS cd00104
Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit ...
430-470 1.83e-08

Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the cognate enzyme as substrate. The reactive site peptide bond is a combining loop which has an identical conformation in all Kazal inhibitors and in all enzyme/inhibitor complexes. These Kazal domains (small hydrophobic core of alpha/beta structure with 3 to 4 disulfide bonds) often occur in tandem arrays. Similar domains are also present in follistatin (FS) and follistatin-like family members, which play an important role in tissue specific regulation. The FS domain consists of an N-terminal beta hairpin (FOLN/EGF-like domain) and a Kazal-like domain and has five disulfide bonds. Although the Kazal-like FS substructure is similar to Kazal proteinase inhibitors, no FS domain has yet been shown to be a proteinase inhibitor. Follistatin-like family members include SPARC, also known as, BM-40 or osteonectin, the Gallus gallus Flik protein, as well as, agrin which has a long array of FS domains. The kazal-type inhibitor domain has also been detected in an extracellular loop region of solute carrier 21 (SLC21) family members (organic anion transporters) , which may regulate the specificity of anion uptake. The distant homolog, Ascidian trypsin inhibitor, is included in this CD.


Pssm-ID: 238052 [Multi-domain]  Cd Length: 41  Bit Score: 51.89  E-value: 1.83e-08
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 2043849250  430 CDGAFRPLCGGDGRTYGSDCQRRRAECLRQAGIAVRHRGPC 470
Cdd:cd00104      1 CPKEYDPVCGSDGKTYSNECHLGCAACRSGRSITVAHNGPC 41
KAZAL smart00280
Kazal type serine protease inhibitors; Kazal type serine protease inhibitors and ...
355-398 2.08e-08

Kazal type serine protease inhibitors; Kazal type serine protease inhibitors and follistatin-like domains.


Pssm-ID: 197624  Cd Length: 46  Bit Score: 51.91  E-value: 2.08e-08
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....
gi 2043849250   355 PEDCPPGSGPVCGDDGVTYESECAMGRAGAIRGIDIQKVRSGQC 398
Cdd:smart00280    3 PEACPREYDPVCGSDGVTYSNECHLCKAACESGKSIEVKHDGPC 46
KAZAL_FS cd00104
Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit ...
725-759 2.27e-08

Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the cognate enzyme as substrate. The reactive site peptide bond is a combining loop which has an identical conformation in all Kazal inhibitors and in all enzyme/inhibitor complexes. These Kazal domains (small hydrophobic core of alpha/beta structure with 3 to 4 disulfide bonds) often occur in tandem arrays. Similar domains are also present in follistatin (FS) and follistatin-like family members, which play an important role in tissue specific regulation. The FS domain consists of an N-terminal beta hairpin (FOLN/EGF-like domain) and a Kazal-like domain and has five disulfide bonds. Although the Kazal-like FS substructure is similar to Kazal proteinase inhibitors, no FS domain has yet been shown to be a proteinase inhibitor. Follistatin-like family members include SPARC, also known as, BM-40 or osteonectin, the Gallus gallus Flik protein, as well as, agrin which has a long array of FS domains. The kazal-type inhibitor domain has also been detected in an extracellular loop region of solute carrier 21 (SLC21) family members (organic anion transporters) , which may regulate the specificity of anion uptake. The distant homolog, Ascidian trypsin inhibitor, is included in this CD.


Pssm-ID: 238052 [Multi-domain]  Cd Length: 41  Bit Score: 51.89  E-value: 2.27e-08
                           10        20        30
                   ....*....|....*....|....*....|....*
gi 2043849250  725 PVCGSDGVTYANECQLKKTRCEKRQELFVTSQGAC 759
Cdd:cd00104      7 PVCGSDGKTYSNECHLGCAACRSGRSITVAHNGPC 41
KAZAL smart00280
Kazal type serine protease inhibitors; Kazal type serine protease inhibitors and ...
430-470 3.50e-08

Kazal type serine protease inhibitors; Kazal type serine protease inhibitors and follistatin-like domains.


Pssm-ID: 197624  Cd Length: 46  Bit Score: 51.14  E-value: 3.50e-08
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|.
gi 2043849250   430 CDGAFRPLCGGDGRTYGSDCQRRRAECLRQAGIAVRHRGPC 470
Cdd:smart00280    6 CPREYDPVCGSDGVTYSNECHLCKAACESGKSIEVKHDGPC 46
KAZAL_FS cd00104
Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit ...
936-977 5.64e-08

Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the cognate enzyme as substrate. The reactive site peptide bond is a combining loop which has an identical conformation in all Kazal inhibitors and in all enzyme/inhibitor complexes. These Kazal domains (small hydrophobic core of alpha/beta structure with 3 to 4 disulfide bonds) often occur in tandem arrays. Similar domains are also present in follistatin (FS) and follistatin-like family members, which play an important role in tissue specific regulation. The FS domain consists of an N-terminal beta hairpin (FOLN/EGF-like domain) and a Kazal-like domain and has five disulfide bonds. Although the Kazal-like FS substructure is similar to Kazal proteinase inhibitors, no FS domain has yet been shown to be a proteinase inhibitor. Follistatin-like family members include SPARC, also known as, BM-40 or osteonectin, the Gallus gallus Flik protein, as well as, agrin which has a long array of FS domains. The kazal-type inhibitor domain has also been detected in an extracellular loop region of solute carrier 21 (SLC21) family members (organic anion transporters) , which may regulate the specificity of anion uptake. The distant homolog, Ascidian trypsin inhibitor, is included in this CD.


Pssm-ID: 238052 [Multi-domain]  Cd Length: 41  Bit Score: 50.73  E-value: 5.64e-08
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 2043849250  936 CPEgNATKVCGSDGVTYGDQCQLRTIACRQGQHITVKHVGQC 977
Cdd:cd00104      1 CPK-EYDPVCGSDGKTYSNECHLGCAACRSGRSITVAHNGPC 41
Laminin_EGF pfam00053
Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.
855-891 9.82e-08

Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.


Pssm-ID: 395007  Cd Length: 49  Bit Score: 50.04  E-value: 9.82e-08
                           10        20        30
                   ....*....|....*....|....*....|....*..
gi 2043849250  855 CGCDPVGSVRDDCEQMSGLCSCRPGISGMKCSRCPAG 891
Cdd:pfam00053    1 CDCNPHGSLSDTCDPETGQCLCKPGVTGRHCDRCKPG 37
KAZAL_FS cd00104
Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit ...
281-326 1.79e-07

Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the cognate enzyme as substrate. The reactive site peptide bond is a combining loop which has an identical conformation in all Kazal inhibitors and in all enzyme/inhibitor complexes. These Kazal domains (small hydrophobic core of alpha/beta structure with 3 to 4 disulfide bonds) often occur in tandem arrays. Similar domains are also present in follistatin (FS) and follistatin-like family members, which play an important role in tissue specific regulation. The FS domain consists of an N-terminal beta hairpin (FOLN/EGF-like domain) and a Kazal-like domain and has five disulfide bonds. Although the Kazal-like FS substructure is similar to Kazal proteinase inhibitors, no FS domain has yet been shown to be a proteinase inhibitor. Follistatin-like family members include SPARC, also known as, BM-40 or osteonectin, the Gallus gallus Flik protein, as well as, agrin which has a long array of FS domains. The kazal-type inhibitor domain has also been detected in an extracellular loop region of solute carrier 21 (SLC21) family members (organic anion transporters) , which may regulate the specificity of anion uptake. The distant homolog, Ascidian trypsin inhibitor, is included in this CD.


Pssm-ID: 238052 [Multi-domain]  Cd Length: 41  Bit Score: 49.19  E-value: 1.79e-07
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 2043849250  281 CPSSCggvaeSPVCGSDGRDYRSLCHLQKHACDAQQDLAKQFDGPC 326
Cdd:cd00104      1 CPKEY-----DPVCGSDGKTYSNECHLGCAACRSGRSITVAHNGPC 41
KAZAL_FS cd00104
Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit ...
358-398 4.59e-07

Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the cognate enzyme as substrate. The reactive site peptide bond is a combining loop which has an identical conformation in all Kazal inhibitors and in all enzyme/inhibitor complexes. These Kazal domains (small hydrophobic core of alpha/beta structure with 3 to 4 disulfide bonds) often occur in tandem arrays. Similar domains are also present in follistatin (FS) and follistatin-like family members, which play an important role in tissue specific regulation. The FS domain consists of an N-terminal beta hairpin (FOLN/EGF-like domain) and a Kazal-like domain and has five disulfide bonds. Although the Kazal-like FS substructure is similar to Kazal proteinase inhibitors, no FS domain has yet been shown to be a proteinase inhibitor. Follistatin-like family members include SPARC, also known as, BM-40 or osteonectin, the Gallus gallus Flik protein, as well as, agrin which has a long array of FS domains. The kazal-type inhibitor domain has also been detected in an extracellular loop region of solute carrier 21 (SLC21) family members (organic anion transporters) , which may regulate the specificity of anion uptake. The distant homolog, Ascidian trypsin inhibitor, is included in this CD.


Pssm-ID: 238052 [Multi-domain]  Cd Length: 41  Bit Score: 48.04  E-value: 4.59e-07
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 2043849250  358 CPPGSGPVCGDDGVTYESECAMGRAGAIRGIDIQKVRSGQC 398
Cdd:cd00104      1 CPKEYDPVCGSDGKTYSNECHLGCAACRSGRSITVAHNGPC 41
Kazal_2 pfam07648
Kazal-type serine protease inhibitor domain; Usually indicative of serine protease inhibitors. ...
628-674 5.44e-07

Kazal-type serine protease inhibitor domain; Usually indicative of serine protease inhibitors. However, kazal-like domains are also seen in the extracellular part of agrins, which are not known to be protease inhibitors. Kazal domains often occur in tandem arrays. Small alpha+beta fold containing three disulphides.


Pssm-ID: 400135  Cd Length: 50  Bit Score: 48.26  E-value: 5.44e-07
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|
gi 2043849250  628 CLCPRCErqpPAPVCGSDGVTYPSPCQLQVASCQLQKSIQVART---GPC 674
Cdd:pfam07648    4 CQCPKTE---YEPVCGSDGVTYPSPCALCAAGCKLGKEVKEEKVkydGSC 50
FSL_SPARC cd01328
Follistatin-like SPARC (secreted protein, acidic, and rich in cysteines) domain; SPARC/BM-40 ...
477-534 6.26e-07

Follistatin-like SPARC (secreted protein, acidic, and rich in cysteines) domain; SPARC/BM-40/osteonectin is a multifunctional glycoprotein which modulates cellular interaction with the extracellular matrix by its binding to structural matrix proteins such as collagen and vitronectin. The protein it composed of an N-terminal acidic region, a follistatin (FS) domain and an EF-hand calcium binding domain. The FS domain consists of an N-terminal beta hairpin (FOLN/EGF-like domain) and a small hydrophobic core of alpha/beta structure (Kazal domain) and has five disulfide bonds and a conserved N-glycosylation site. The FSL_SPARC domain is a member of the superfamily of kazal-like proteinase inhibitors and follistatin-like proteins.


Pssm-ID: 238649 [Multi-domain]  Cd Length: 86  Bit Score: 49.01  E-value: 6.26e-07
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2043849250  477 PCLSVECSFGATCVV-KNQAAVCECQQQCQGRYDP---VCGTDQRTYGSPCELHAMACLLQR 534
Cdd:cd01328      1 PCENHHCGAGKVCEVdDENTPKCVCIDPCPEEVDDrrkVCTNDNETFDSDCELYRTRCLCKG 62
Kazal_2 pfam07648
Kazal-type serine protease inhibitor domain; Usually indicative of serine protease inhibitors. ...
714-759 9.90e-07

Kazal-type serine protease inhibitor domain; Usually indicative of serine protease inhibitors. However, kazal-like domains are also seen in the extracellular part of agrins, which are not known to be protease inhibitors. Kazal domains often occur in tandem arrays. Small alpha+beta fold containing three disulphides.


Pssm-ID: 400135  Cd Length: 50  Bit Score: 47.49  E-value: 9.90e-07
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*....
gi 2043849250  714 CDFTCAAAPRAPVCGSDGVTYANECQLKKTRCEKRQELFVT---SQGAC 759
Cdd:pfam07648    2 CNCQCPKTEYEPVCGSDGVTYPSPCALCAAGCKLGKEVKEEkvkYDGSC 50
KAZAL_PSTI cd01327
Kazal-type pancreatic secretory trypsin inhibitors (PSTI) and related proteins, including the ...
504-544 1.41e-06

Kazal-type pancreatic secretory trypsin inhibitors (PSTI) and related proteins, including the second domain of the ovomucoid turkey inhibitor and the C-terminal domain of the esophagus cancer-related gene-2 protein (ECRG-2), are members of the superfamily of kazal-type proteinase inhibitors and follistatin-like proteins.


Pssm-ID: 238648  Cd Length: 45  Bit Score: 46.89  E-value: 1.41e-06
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 2043849250  504 CQGRYDPVCGTDQRTYGSPCELHAMACLLQRDIGLRHRGPC 544
Cdd:cd01327      5 CPKDYDPVCGTDGVTYSNECLLCAENLKRQTNIRIKHDGEC 45
EGF_Lam cd00055
Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous ...
854-891 1.63e-06

Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies


Pssm-ID: 238012  Cd Length: 50  Bit Score: 46.58  E-value: 1.63e-06
                           10        20        30
                   ....*....|....*....|....*....|....*...
gi 2043849250  854 PCGCDPVGSVRDDCEQMSGLCSCRPGISGMKCSRCPAG 891
Cdd:cd00055      1 PCDCNGHGSLSGQCDPGTGQCECKPNTTGRRCDRCAPG 38
Kazal_1 pfam00050
Kazal-type serine protease inhibitor domain; Usually indicative of serine protease inhibitors. ...
357-398 1.84e-06

Kazal-type serine protease inhibitor domain; Usually indicative of serine protease inhibitors. However, kazal-like domains are also seen in the extracellular part of agrins, which are not known to be protease inhibitors. Kazal domains often occur in tandem arrays. Small alpha+beta fold containing three disulphides. Alignment also includes a single domain from transporters in the OATP/PGT family.


Pssm-ID: 395004  Cd Length: 49  Bit Score: 46.51  E-value: 1.84e-06
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 2043849250  357 DCPPGSGPVCGDDGVTYESECAMGRAGAIRGIDIQKVRSGQC 398
Cdd:pfam00050    8 ACPRIYDPVCGTDGKTYSNECLFCAENGKRGTNLHKVHDGEC 49
EGF_CA cd00054
Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular ...
1865-1897 5.15e-06

Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.


Pssm-ID: 238011  Cd Length: 38  Bit Score: 44.94  E-value: 5.15e-06
                           10        20        30
                   ....*....|....*....|....*....|...
gi 2043849250 1865 QEPNPCQPGGTCQPSMAGYQCSCHAGFAGARCE 1897
Cdd:cd00054      6 ASGNPCQNGGTCVNTVGSYRCSCPPGYTGRNCE 38
KAZAL_PSTI cd01327
Kazal-type pancreatic secretory trypsin inhibitors (PSTI) and related proteins, including the ...
210-251 6.34e-06

Kazal-type pancreatic secretory trypsin inhibitors (PSTI) and related proteins, including the second domain of the ovomucoid turkey inhibitor and the C-terminal domain of the esophagus cancer-related gene-2 protein (ECRG-2), are members of the superfamily of kazal-type proteinase inhibitors and follistatin-like proteins.


Pssm-ID: 238648  Cd Length: 45  Bit Score: 44.97  E-value: 6.34e-06
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 2043849250  210 PCAPVVAPVCGSDHSTYSNECELDRAQCNQQRRIKVVSKGPC 251
Cdd:cd01327      4 GCPKDYDPVCGTDGVTYSNECLLCAENLKRQTNIRIKHDGEC 45
EGF_Lam smart00180
Laminin-type epidermal growth factor-like domai;
855-891 7.75e-06

Laminin-type epidermal growth factor-like domai;


Pssm-ID: 214543  Cd Length: 46  Bit Score: 44.61  E-value: 7.75e-06
                            10        20        30
                    ....*....|....*....|....*....|....*..
gi 2043849250   855 CGCDPVGSVRDDCEQMSGLCSCRPGISGMKCSRCPAG 891
Cdd:smart00180    1 CDCDPGGSASGTCDPDTGQCECKPNVTGRRCDRCAPG 37
Laminin_G_3 pfam13385
Concanavalin A-like lectin/glucanases superfamily; This domain belongs to the Concanavalin ...
1472-1540 1.01e-05

Concanavalin A-like lectin/glucanases superfamily; This domain belongs to the Concanavalin A-like lectin/glucanases superfamily.


Pssm-ID: 463865 [Multi-domain]  Cd Length: 151  Bit Score: 47.38  E-value: 1.01e-05
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2043849250 1472 QLRFDTGSGTG---TVTSRVPVEPGRWHRLLVTRNRRTGTLAVDGEP----PVSGHSPPGTDGLnldteLFIGGVP 1540
Cdd:pfam13385   55 RLRFAVNGGNGgwdTVTSGASVPLGQWTHVAVTYDGGTLRLYVNGVLvgssTLTGGPPPGTGGP-----LYIGRSP 125
Kazal_1 pfam00050
Kazal-type serine protease inhibitor domain; Usually indicative of serine protease inhibitors. ...
725-759 2.23e-05

Kazal-type serine protease inhibitor domain; Usually indicative of serine protease inhibitors. However, kazal-like domains are also seen in the extracellular part of agrins, which are not known to be protease inhibitors. Kazal domains often occur in tandem arrays. Small alpha+beta fold containing three disulphides. Alignment also includes a single domain from transporters in the OATP/PGT family.


Pssm-ID: 395004  Cd Length: 49  Bit Score: 43.43  E-value: 2.23e-05
                           10        20        30
                   ....*....|....*....|....*....|....*
gi 2043849250  725 PVCGSDGVTYANECQLKKTRCEKRQELFVTSQGAC 759
Cdd:pfam00050   15 PVCGTDGKTYSNECLFCAENGKRGTNLHKVHDGEC 49
Kazal_2 pfam07648
Kazal-type serine protease inhibitor domain; Usually indicative of serine protease inhibitors. ...
499-544 2.48e-05

Kazal-type serine protease inhibitor domain; Usually indicative of serine protease inhibitors. However, kazal-like domains are also seen in the extracellular part of agrins, which are not known to be protease inhibitors. Kazal domains often occur in tandem arrays. Small alpha+beta fold containing three disulphides.


Pssm-ID: 400135  Cd Length: 50  Bit Score: 43.25  E-value: 2.48e-05
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|
gi 2043849250  499 ECQQQCQG-RYDPVCGTDQRTYGSPCELHAMACLLQRDIG---LRHRGPC 544
Cdd:pfam07648    1 NCNCQCPKtEYEPVCGSDGVTYPSPCALCAAGCKLGKEVKeekVKYDGSC 50
KAZAL_PSTI cd01327
Kazal-type pancreatic secretory trypsin inhibitors (PSTI) and related proteins, including the ...
640-674 2.85e-05

Kazal-type pancreatic secretory trypsin inhibitors (PSTI) and related proteins, including the second domain of the ovomucoid turkey inhibitor and the C-terminal domain of the esophagus cancer-related gene-2 protein (ECRG-2), are members of the superfamily of kazal-type proteinase inhibitors and follistatin-like proteins.


Pssm-ID: 238648  Cd Length: 45  Bit Score: 43.04  E-value: 2.85e-05
                           10        20        30
                   ....*....|....*....|....*....|....*
gi 2043849250  640 PVCGSDGVTYPSPCQLQVASCQLQKSIQVARTGPC 674
Cdd:cd01327     11 PVCGTDGVTYSNECLLCAENLKRQTNIRIKHDGEC 45
KAZAL_PSTI cd01327
Kazal-type pancreatic secretory trypsin inhibitors (PSTI) and related proteins, including the ...
358-398 3.86e-05

Kazal-type pancreatic secretory trypsin inhibitors (PSTI) and related proteins, including the second domain of the ovomucoid turkey inhibitor and the C-terminal domain of the esophagus cancer-related gene-2 protein (ECRG-2), are members of the superfamily of kazal-type proteinase inhibitors and follistatin-like proteins.


Pssm-ID: 238648  Cd Length: 45  Bit Score: 42.66  E-value: 3.86e-05
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 2043849250  358 CPPGSGPVCGDDGVTYESECAMGRAGAIRGIDIQKVRSGQC 398
Cdd:cd01327      5 CPKDYDPVCGTDGVTYSNECLLCAENLKRQTNIRIKHDGEC 45
Kazal_2 pfam07648
Kazal-type serine protease inhibitor domain; Usually indicative of serine protease inhibitors. ...
216-251 3.89e-05

Kazal-type serine protease inhibitor domain; Usually indicative of serine protease inhibitors. However, kazal-like domains are also seen in the extracellular part of agrins, which are not known to be protease inhibitors. Kazal domains often occur in tandem arrays. Small alpha+beta fold containing three disulphides.


Pssm-ID: 400135  Cd Length: 50  Bit Score: 42.87  E-value: 3.89e-05
                           10        20        30
                   ....*....|....*....|....*....|....*....
gi 2043849250  216 APVCGSDHSTYSNECELDRAQCNQQRRIK---VVSKGPC 251
Cdd:pfam07648   12 EPVCGSDGVTYPSPCALCAAGCKLGKEVKeekVKYDGSC 50
Kazal_2 pfam07648
Kazal-type serine protease inhibitor domain; Usually indicative of serine protease inhibitors. ...
281-326 7.90e-05

Kazal-type serine protease inhibitor domain; Usually indicative of serine protease inhibitors. However, kazal-like domains are also seen in the extracellular part of agrins, which are not known to be protease inhibitors. Kazal domains often occur in tandem arrays. Small alpha+beta fold containing three disulphides.


Pssm-ID: 400135  Cd Length: 50  Bit Score: 42.09  E-value: 7.90e-05
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*....
gi 2043849250  281 CPSSCGGVAESPVCGSDGRDYRSLCHLQKHACDAQQDLAKQF---DGPC 326
Cdd:pfam07648    2 CNCQCPKTEYEPVCGSDGVTYPSPCALCAAGCKLGKEVKEEKvkyDGSC 50
EGF_CA smart00179
Calcium-binding EGF-like domain;
1865-1897 1.14e-04

Calcium-binding EGF-like domain;


Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 41.08  E-value: 1.14e-04
                            10        20        30
                    ....*....|....*....|....*....|....
gi 2043849250  1865 QEPNPCQPGGTCQPSMAGYQCSCHAGF-AGARCE 1897
Cdd:smart00179    6 ASGNPCQNGGTCVNTVGSYRCECPPGYtDGRNCE 39
FSL_SPARC cd01328
Follistatin-like SPARC (secreted protein, acidic, and rich in cysteines) domain; SPARC/BM-40 ...
543-596 1.83e-04

Follistatin-like SPARC (secreted protein, acidic, and rich in cysteines) domain; SPARC/BM-40/osteonectin is a multifunctional glycoprotein which modulates cellular interaction with the extracellular matrix by its binding to structural matrix proteins such as collagen and vitronectin. The protein it composed of an N-terminal acidic region, a follistatin (FS) domain and an EF-hand calcium binding domain. The FS domain consists of an N-terminal beta hairpin (FOLN/EGF-like domain) and a small hydrophobic core of alpha/beta structure (Kazal domain) and has five disulfide bonds and a conserved N-glycosylation site. The FSL_SPARC domain is a member of the superfamily of kazal-like proteinase inhibitors and follistatin-like proteins.


Pssm-ID: 238649 [Multi-domain]  Cd Length: 86  Bit Score: 42.08  E-value: 1.83e-04
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 2043849250  543 PCE--RCGKCRFGAICEAETGRCVCPTECVPSAQP---VCGSDGNTYGSECELHVRACT 596
Cdd:cd01328      1 PCEnhHCGAGKVCEVDDENTPKCVCIDPCPEEVDDrrkVCTNDNETFDSDCELYRTRCL 59
KAZAL_PSTI cd01327
Kazal-type pancreatic secretory trypsin inhibitors (PSTI) and related proteins, including the ...
574-609 3.36e-04

Kazal-type pancreatic secretory trypsin inhibitors (PSTI) and related proteins, including the second domain of the ovomucoid turkey inhibitor and the C-terminal domain of the esophagus cancer-related gene-2 protein (ECRG-2), are members of the superfamily of kazal-type proteinase inhibitors and follistatin-like proteins.


Pssm-ID: 238648  Cd Length: 45  Bit Score: 39.96  E-value: 3.36e-04
                           10        20        30
                   ....*....|....*....|....*....|....*.
gi 2043849250  574 QPVCGSDGNTYGSECELHVRACTQQENILVAAQGPC 609
Cdd:cd01327     10 DPVCGTDGVTYSNECLLCAENLKRQTNIRIKHDGEC 45
KAZAL_PSTI cd01327
Kazal-type pancreatic secretory trypsin inhibitors (PSTI) and related proteins, including the ...
725-759 3.49e-04

Kazal-type pancreatic secretory trypsin inhibitors (PSTI) and related proteins, including the second domain of the ovomucoid turkey inhibitor and the C-terminal domain of the esophagus cancer-related gene-2 protein (ECRG-2), are members of the superfamily of kazal-type proteinase inhibitors and follistatin-like proteins.


Pssm-ID: 238648  Cd Length: 45  Bit Score: 39.96  E-value: 3.49e-04
                           10        20        30
                   ....*....|....*....|....*....|....*
gi 2043849250  725 PVCGSDGVTYANECQLKKTRCEKRQELFVTSQGAC 759
Cdd:cd01327     11 PVCGTDGVTYSNECLLCAENLKRQTNIRIKHDGEC 45
Kazal_1 pfam00050
Kazal-type serine protease inhibitor domain; Usually indicative of serine protease inhibitors. ...
217-251 3.74e-04

Kazal-type serine protease inhibitor domain; Usually indicative of serine protease inhibitors. However, kazal-like domains are also seen in the extracellular part of agrins, which are not known to be protease inhibitors. Kazal domains often occur in tandem arrays. Small alpha+beta fold containing three disulphides. Alignment also includes a single domain from transporters in the OATP/PGT family.


Pssm-ID: 395004  Cd Length: 49  Bit Score: 39.96  E-value: 3.74e-04
                           10        20        30
                   ....*....|....*....|....*....|....*
gi 2043849250  217 PVCGSDHSTYSNECELDRAQCNQQRRIKVVSKGPC 251
Cdd:pfam00050   15 PVCGTDGKTYSNECLFCAENGKRGTNLHKVHDGEC 49
Kazal_1 pfam00050
Kazal-type serine protease inhibitor domain; Usually indicative of serine protease inhibitors. ...
504-544 4.25e-04

Kazal-type serine protease inhibitor domain; Usually indicative of serine protease inhibitors. However, kazal-like domains are also seen in the extracellular part of agrins, which are not known to be protease inhibitors. Kazal domains often occur in tandem arrays. Small alpha+beta fold containing three disulphides. Alignment also includes a single domain from transporters in the OATP/PGT family.


Pssm-ID: 395004  Cd Length: 49  Bit Score: 39.96  E-value: 4.25e-04
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 2043849250  504 CQGRYDPVCGTDQRTYGSPCELHAMACLLQRDIGLRHRGPC 544
Cdd:pfam00050    9 CPRIYDPVCGTDGKTYSNECLFCAENGKRGTNLHKVHDGEC 49
PHA03378 PHA03378
EBNA-3B; Provisional
1292-1362 5.41e-04

EBNA-3B; Provisional


Pssm-ID: 223065 [Multi-domain]  Cd Length: 991  Bit Score: 45.06  E-value: 5.41e-04
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2043849250 1292 AAPGSARRVPAATAALGQPVGSPGQPVGTAGTAGHPGHPVGTVGSPGEPVGTTGTARSPAGTAGSSRGAPP 1362
Cdd:PHA03378   709 APPGRAQRPAAATGRARPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGAPTPQPP 779
EGF_CA cd00054
Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular ...
1381-1408 8.19e-04

Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.


Pssm-ID: 238011  Cd Length: 38  Bit Score: 38.77  E-value: 8.19e-04
                           10        20
                   ....*....|....*....|....*...
gi 2043849250 1381 CRHGGTCRDDGHGFTCSCPAGTAGTTCE 1408
Cdd:cd00054     11 CQNGGTCVNTVGSYRCSCPPGYTGRNCE 38
EGF cd00053
Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large ...
1865-1897 9.94e-04

Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium.


Pssm-ID: 238010  Cd Length: 36  Bit Score: 38.61  E-value: 9.94e-04
                           10        20        30
                   ....*....|....*....|....*....|....
gi 2043849250 1865 QEPNPCQPGGTCQPSMAGYQCSCHAGFAGA-RCE 1897
Cdd:cd00053      3 AASNPCSNGGTCVNTPGSYRCVCPPGYTGDrSCE 36
Kazal_2 pfam07648
Kazal-type serine protease inhibitor domain; Usually indicative of serine protease inhibitors. ...
936-977 1.09e-03

Kazal-type serine protease inhibitor domain; Usually indicative of serine protease inhibitors. However, kazal-like domains are also seen in the extracellular part of agrins, which are not known to be protease inhibitors. Kazal domains often occur in tandem arrays. Small alpha+beta fold containing three disulphides.


Pssm-ID: 400135  Cd Length: 50  Bit Score: 38.63  E-value: 1.09e-03
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*
gi 2043849250  936 CPEGNATKVCGSDGVTYGDQCQLRTIACRQG---QHITVKHVGQC 977
Cdd:pfam07648    6 CPKTEYEPVCGSDGVTYPSPCALCAAGCKLGkevKEEKVKYDGSC 50
FSL_SPARC cd01328
Follistatin-like SPARC (secreted protein, acidic, and rich in cysteines) domain; SPARC/BM-40 ...
181-237 1.17e-03

Follistatin-like SPARC (secreted protein, acidic, and rich in cysteines) domain; SPARC/BM-40/osteonectin is a multifunctional glycoprotein which modulates cellular interaction with the extracellular matrix by its binding to structural matrix proteins such as collagen and vitronectin. The protein it composed of an N-terminal acidic region, a follistatin (FS) domain and an EF-hand calcium binding domain. The FS domain consists of an N-terminal beta hairpin (FOLN/EGF-like domain) and a small hydrophobic core of alpha/beta structure (Kazal domain) and has five disulfide bonds and a conserved N-glycosylation site. The FSL_SPARC domain is a member of the superfamily of kazal-like proteinase inhibitors and follistatin-like proteins.


Pssm-ID: 238649 [Multi-domain]  Cd Length: 86  Bit Score: 39.77  E-value: 1.17e-03
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2043849250  181 CRGMLCGFGAVCERspTEPGQASCVCRKgPCAPVVAP---VCGSDHSTYSNECELDRAQC 237
Cdd:cd01328      2 CENHHCGAGKVCEV--DDENTPKCVCID-PCPEEVDDrrkVCTNDNETFDSDCELYRTRC 58
EGF pfam00008
EGF-like domain; There is no clear separation between noise and signal. pfam00053 is very ...
1594-1625 1.23e-03

EGF-like domain; There is no clear separation between noise and signal. pfam00053 is very similar, but has 8 instead of 6 conserved cysteines. Includes some cytokine receptors. The EGF domain misses the N-terminus regions of the Ca2+ binding EGF domains (this is the main reason of discrepancy between swiss-prot domain start/end and Pfam). The family is hard to model due to many similar but different sub-types of EGF domains. Pfam certainly misses a number of EGF domains.


Pssm-ID: 394967  Cd Length: 31  Bit Score: 38.13  E-value: 1.23e-03
                           10        20        30
                   ....*....|....*....|....*....|..
gi 2043849250 1594 CQPNPCHHGGTCQpRDADAFQCQCPEAYAGPT 1625
Cdd:pfam00008    1 CAPNPCSNGGTCV-DTPGGYTCICPEGYTGKR 31
Kazal_1 pfam00050
Kazal-type serine protease inhibitor domain; Usually indicative of serine protease inhibitors. ...
640-674 1.70e-03

Kazal-type serine protease inhibitor domain; Usually indicative of serine protease inhibitors. However, kazal-like domains are also seen in the extracellular part of agrins, which are not known to be protease inhibitors. Kazal domains often occur in tandem arrays. Small alpha+beta fold containing three disulphides. Alignment also includes a single domain from transporters in the OATP/PGT family.


Pssm-ID: 395004  Cd Length: 49  Bit Score: 38.03  E-value: 1.70e-03
                           10        20        30
                   ....*....|....*....|....*....|....*
gi 2043849250  640 PVCGSDGVTYPSPCQLQVASCQLQKSIQVARTGPC 674
Cdd:pfam00050   15 PVCGTDGKTYSNECLFCAENGKRGTNLHKVHDGEC 49
FSL_SPARC cd01328
Follistatin-like SPARC (secreted protein, acidic, and rich in cysteines) domain; SPARC/BM-40 ...
909-979 1.78e-03

Follistatin-like SPARC (secreted protein, acidic, and rich in cysteines) domain; SPARC/BM-40/osteonectin is a multifunctional glycoprotein which modulates cellular interaction with the extracellular matrix by its binding to structural matrix proteins such as collagen and vitronectin. The protein it composed of an N-terminal acidic region, a follistatin (FS) domain and an EF-hand calcium binding domain. The FS domain consists of an N-terminal beta hairpin (FOLN/EGF-like domain) and a small hydrophobic core of alpha/beta structure (Kazal domain) and has five disulfide bonds and a conserved N-glycosylation site. The FSL_SPARC domain is a member of the superfamily of kazal-like proteinase inhibitors and follistatin-like proteins.


Pssm-ID: 238649 [Multi-domain]  Cd Length: 86  Bit Score: 39.38  E-value: 1.78e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2043849250  909 CQELSCDFGASC-VELNGRAHCECPSPlCPE--GNATKVCGSDGVTYGDQCQLRTIAC-----------RQGQHITVKHV 974
Cdd:cd01328      2 CENHHCGAGKVCeVDDENTPKCVCIDP-CPEevDDRRKVCTNDNETFDSDCELYRTRClckggkkgcrgPKYQHLHLDYY 80

                   ....*
gi 2043849250  975 GQCHE 979
Cdd:cd01328     81 GECKE 85
Kazal_2 pfam07648
Kazal-type serine protease inhibitor domain; Usually indicative of serine protease inhibitors. ...
562-601 2.81e-03

Kazal-type serine protease inhibitor domain; Usually indicative of serine protease inhibitors. However, kazal-like domains are also seen in the extracellular part of agrins, which are not known to be protease inhibitors. Kazal domains often occur in tandem arrays. Small alpha+beta fold containing three disulphides.


Pssm-ID: 400135  Cd Length: 50  Bit Score: 37.47  E-value: 2.81e-03
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|
gi 2043849250  562 RCVCPTecvPSAQPVCGSDGNTYGSECELHVRACTQQENI 601
Cdd:pfam07648    3 NCQCPK---TEYEPVCGSDGVTYPSPCALCAAGCKLGKEV 39
EGF_CA cd00054
Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular ...
1595-1626 5.81e-03

Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.


Pssm-ID: 238011  Cd Length: 38  Bit Score: 36.46  E-value: 5.81e-03
                           10        20        30
                   ....*....|....*....|....*....|..
gi 2043849250 1595 QPNPCHHGGTCQPRDADaFQCQCPEAYAGPTC 1626
Cdd:cd00054      7 SGNPCQNGGTCVNTVGS-YRCSCPPGYTGRNC 37
FIMAC smart00057
factor I membrane attack complex;
547-609 5.85e-03

factor I membrane attack complex;


Pssm-ID: 214493 [Multi-domain]  Cd Length: 68  Bit Score: 37.14  E-value: 5.85e-03
                            10        20        30        40        50        60
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2043849250   547 CGKCRFGAICEAETGRCVCPTECVPSAQPVCGSDGNTYG--SECELHVRACTQQeNILVAAQGPC 609
Cdd:smart00057    3 KGFCQLWQKCSASTCVCKLPYECPKAGTDVCVEDGRSEKtlTYCKQGALRCLNQ-KYKFLHIGSC 66
Kazal_1 pfam00050
Kazal-type serine protease inhibitor domain; Usually indicative of serine protease inhibitors. ...
932-977 6.25e-03

Kazal-type serine protease inhibitor domain; Usually indicative of serine protease inhibitors. However, kazal-like domains are also seen in the extracellular part of agrins, which are not known to be protease inhibitors. Kazal domains often occur in tandem arrays. Small alpha+beta fold containing three disulphides. Alignment also includes a single domain from transporters in the OATP/PGT family.


Pssm-ID: 395004  Cd Length: 49  Bit Score: 36.49  E-value: 6.25e-03
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 2043849250  932 PSPLCPeGNATKVCGSDGVTYGDQCQLRTIACRQGQHITVKHVGQC 977
Cdd:pfam00050    5 PSGACP-RIYDPVCGTDGKTYSNECLFCAENGKRGTNLHKVHDGEC 49
MFS_SLCO_OATP cd17336
Solute carrier organic anion transporters of the Major Facilitator Superfamily of transporters; ...
498-527 7.57e-03

Solute carrier organic anion transporters of the Major Facilitator Superfamily of transporters; Solute carrier organic anion transporters (SLCOs) are also called organic anion transporting polypeptides (OATPs) or SLC21 (Solute carrier family 21) proteins. They are sodium-independent transporters that mediate the transport of a broad range of endo- as well as xenobiotics. Their substrates are mainly amphipathic organic anions with a molecular weight of more than 300Da, although there are a few known neutral or positively charged substrates. These include drugs including statins, angiotensin-converting enzyme inhibitors, angiotensin receptor blockers, antibiotics, antihistaminics, antihypertensives, and anticancer drugs. SLCOs/OATPs can be classified into 6 families (SLCO1-6 or OATP1-6) and each family may have subfamilies (e.g. OATP1A, OATP1B, OATP1C). Within the subfamilies, individual members are numbered according to the chronology of their identification and if there is already an ortholog known, they are given the same number. For example, the first SLCO identified, is rat OATP1A1 (encoded by the Slco1a1 gene). The second SLCO identified is the first human SLCO from the same subfamily and is called OATP1A2 (encoded by the SLCO1A2 gene). There are 11 human SLCOs/OATPs. SLCOs belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340894 [Multi-domain]  Cd Length: 411  Bit Score: 41.07  E-value: 7.57e-03
                           10        20        30
                   ....*....|....*....|....*....|...
gi 2043849250  498 CECQQQC---QGRYDPVCGTDQRTYGSPCelHA 527
Cdd:cd17336    310 SSCNSDCncsDSSFSPVCGSDGITYFSPC--HA 340
MFS_SLCO4A_OATP4A cd17462
Solute carrier organic anion transporter 4A subfamily of the Major Facilitator Superfamily of ...
256-306 8.14e-03

Solute carrier organic anion transporter 4A subfamily of the Major Facilitator Superfamily of transporters; The Solute carrier organic anion transporter 4A (SLCO4A), also called Organic anion-transporting polypeptide 4A (OATP4A), subfamily has one mammalian member, OATP4A1 (encoded by SLCO4A1). It is ubiquitously expressed and it mediates the Na(+)-independent transport of the thyroid hormones T3 (triiodo-L-thyronine), T4 (thyroxine) and rT3, and other organic anions such as estrone sulfate and taurocholate. OATP4A1 is the most abundantly expressed transporter colorectal cancer (CRC) and its role in the transport of estrone sulfate, which is used in hormone replacement therapy (HRT), affects the outcome of the treatment. The SLCO4A/OATP4A subfamily belongs to the Solute carrier organic anion transporter [SLCO, also called organic anion transporting polypeptides (OATPs) or Solute carrier family 21] family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341020 [Multi-domain]  Cd Length: 427  Bit Score: 40.97  E-value: 8.14e-03
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|...
gi 2043849250  256 PCAEVTCSFGSSCVPSpDGQAAKCVCPSSCGGVAE--SPVCGSDGRDYRSLCH 306
Cdd:cd17462    303 PMAGVTASYRGSVLPE-GSLNLTALCNADCRCLEEiySPVCGADGLMYYSPCH 354
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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