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Conserved domains on  [gi|2007691660|ref|XP_039977872|]
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chitin synthase chs-1-like [Xiphias gladius]

Protein Classification

glycosyltransferase( domain architecture ID 11663187)

glycosyltransferase catalyzes the transfer of saccharide moieties from a donor to an acceptor to form glycosidic bonds, and may have acyltransferase activity; belongs to the glycosyltransferase A (GT-A) superfamily

EC:  2.4.-.-
Gene Ontology:  GO:0016757|GO:0006486
SCOP:  3000077

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Glyco_tranf_GTA_type super family cl11394
Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a ...
50-263 4.75e-77

Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold; Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it also includes families GT-43, GT-6, GT-8, GT13 and GT-7; which are evolutionarily related to GT-2 and share structure similarities.


The actual alignment was detected with superfamily member cd04190:

Pssm-ID: 472172 [Multi-domain]  Cd Length: 244  Bit Score: 247.61  E-value: 4.75e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2007691660  50 SLVVHFKDKQLIRHKKRWSQVMYLYYLLGwkvvtkyisirkavqlcqfLQKEKHNTYLLALDGDTDFQPAAVMLLIDRMR 129
Cdd:cd04190    39 VVCVIFDGAIKKNRGKRDSQLWFFNYFCR-------------------VLFPDDPEFILLVDADTKFDPDSIVQLYKAMD 99
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2007691660 130 LYPLVGAVCGRIHPTGS--GPMVWYQKFEYAVGHWLHKTAEHVFGCVLCSPGCFSLFRAAALMDDNVMKKYTIKASKAQ- 206
Cdd:cd04190   100 KDPEIGGVCGEIHPMGKkqGPLVMYQVFEYAISHWLDKAFESVFGFVTCLPGCFSMYRIEALKGDNGGKGPLLDYAYLTn 179
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2007691660 207 ------HYIQYDQGEDRWLCTLLLKQGWRVEYN--AASDAFTNAPEEFKEFYNQRRRWGPSTMAN 263
Cdd:cd04190   180 tvdslhKKNNLDLGEDRILCTLLLKAGPKRKYLyvPGAVAETDVPETFVELLSQRRRWINSTIAN 244
BcsA COG1215
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1, ...
178-365 8.50e-11

Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility];


:

Pssm-ID: 440828 [Multi-domain]  Cd Length: 303  Bit Score: 63.61  E-value: 8.50e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2007691660 178 PGCFSLFRAAALMDDNVMKKYTIkaskaqhyiqydqGEDRWLCTLLLKQGWRVEYNAASDAFTNAPEEFKEFYNQRRRWG 257
Cdd:COG1215   144 SGANLAFRREALEEVGGFDEDTL-------------GEDLDLSLRLLRAGYRIVYVPDAVVYEEAPETLRALFRQRRRWA 210
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2007691660 258 pstmanivdlLGTGSLITSRNPSMSRVYMLYLLFGLASSILapstvvlmsagsltILLKIHPNAALVLAVIPpavYLGIS 337
Cdd:COG1215   211 ----------RGGLQLLLKHRPLLRPRRLLLFLLLLLLPLL--------------LLLLLLALLALLLLLLP---ALLLA 263
                         170       180
                  ....*....|....*....|....*...
gi 2007691660 338 FRIKSDTQILIAAVLSILYAFLMMITAL 365
Cdd:COG1215   264 LLLALRRRRLLLPLLHLLYGLLLLLAAL 291
 
Name Accession Description Interval E-value
Chitin_synth_C cd04190
C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate ...
50-263 4.75e-77

C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin; Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.


Pssm-ID: 133033 [Multi-domain]  Cd Length: 244  Bit Score: 247.61  E-value: 4.75e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2007691660  50 SLVVHFKDKQLIRHKKRWSQVMYLYYLLGwkvvtkyisirkavqlcqfLQKEKHNTYLLALDGDTDFQPAAVMLLIDRMR 129
Cdd:cd04190    39 VVCVIFDGAIKKNRGKRDSQLWFFNYFCR-------------------VLFPDDPEFILLVDADTKFDPDSIVQLYKAMD 99
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2007691660 130 LYPLVGAVCGRIHPTGS--GPMVWYQKFEYAVGHWLHKTAEHVFGCVLCSPGCFSLFRAAALMDDNVMKKYTIKASKAQ- 206
Cdd:cd04190   100 KDPEIGGVCGEIHPMGKkqGPLVMYQVFEYAISHWLDKAFESVFGFVTCLPGCFSMYRIEALKGDNGGKGPLLDYAYLTn 179
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2007691660 207 ------HYIQYDQGEDRWLCTLLLKQGWRVEYN--AASDAFTNAPEEFKEFYNQRRRWGPSTMAN 263
Cdd:cd04190   180 tvdslhKKNNLDLGEDRILCTLLLKAGPKRKYLyvPGAVAETDVPETFVELLSQRRRWINSTIAN 244
Chitin_synth_2 pfam03142
Chitin synthase; Members of this family are fungal chitin synthase EC:2.4.1.16 enzymes. They ...
106-439 2.27e-22

Chitin synthase; Members of this family are fungal chitin synthase EC:2.4.1.16 enzymes. They catalyze chitin synthesis as follows: UDP-N-acetyl-D-glucosamine + {(1,4)-(N-acetyl-beta-D-glucosaminyl)}(N) <=> UDP + {(1,4)-(N-acetyl-beta-D-glucosaminyl)}(N+1).


Pssm-ID: 367353 [Multi-domain]  Cd Length: 527  Bit Score: 101.38  E-value: 2.27e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2007691660 106 YLLALDGDTDFQPAAVMLLIDRMRLYPLVGAVCG--RIHPTGSGPMVWYQKFEYAVGHWLHKTAEHVFGCVLCSPGCFSL 183
Cdd:pfam03142 204 YVLMVDADTKVFPDSLTRMVACMVDDPEIMGLCGetKIANKRQSWVTAIQVFEYYISHHLSKAFESVFGGVTCLPGCFSM 283
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2007691660 184 FRAAALMD-DNVMKKYTIKASKAQHYIQYDQ-----------GEDRWLCTLLLKQ--GWRVEYNAASDAFTNAPEEFKEF 249
Cdd:pfam03142 284 YRIKAPKGgDGYWVPILASPDIVEHYSENVVdtlhkknllllGEDRYLTTLMLKTfpKRKTVFVPQAVCKTIAPDTFKVL 363
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2007691660 250 YNQRRRWGPSTMANIVDLLGTGSLITSRNPSMSRVYMLYLLfglassilapSTVVLMSAGSLTILLkihpnaaLVLAVIP 329
Cdd:pfam03142 364 LSQRRRWINSTVHNLMELVLVRDLCGTFCFSMQFVVFIELI----------GTVVLPAAIAFTVYL-------IVISILT 426
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2007691660 330 PAVYLGISFriksdtqILIAAVLSiLYAFLMMITAlviignivkdktiltpsslfiialagfylitalmhpQEAGLVVYG 409
Cdd:pfam03142 427 PDPVPVIPL-------VLLAAILG-LPAILILLTT------------------------------------RKWVYIGWM 462
                         330       340       350
                  ....*....|....*....|....*....|.
gi 2007691660 410 LLYILCIPSAYLLLAIYSMVNMNNVSWG-TR 439
Cdd:pfam03142 463 LVYLLALPIWNFVLPLYAFWHFDDFSWGnTR 493
BcsA COG1215
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1, ...
178-365 8.50e-11

Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility];


Pssm-ID: 440828 [Multi-domain]  Cd Length: 303  Bit Score: 63.61  E-value: 8.50e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2007691660 178 PGCFSLFRAAALMDDNVMKKYTIkaskaqhyiqydqGEDRWLCTLLLKQGWRVEYNAASDAFTNAPEEFKEFYNQRRRWG 257
Cdd:COG1215   144 SGANLAFRREALEEVGGFDEDTL-------------GEDLDLSLRLLRAGYRIVYVPDAVVYEEAPETLRALFRQRRRWA 210
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2007691660 258 pstmanivdlLGTGSLITSRNPSMSRVYMLYLLFGLASSILapstvvlmsagsltILLKIHPNAALVLAVIPpavYLGIS 337
Cdd:COG1215   211 ----------RGGLQLLLKHRPLLRPRRLLLFLLLLLLPLL--------------LLLLLLALLALLLLLLP---ALLLA 263
                         170       180
                  ....*....|....*....|....*...
gi 2007691660 338 FRIKSDTQILIAAVLSILYAFLMMITAL 365
Cdd:COG1215   264 LLLALRRRRLLLPLLHLLYGLLLLLAAL 291
 
Name Accession Description Interval E-value
Chitin_synth_C cd04190
C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate ...
50-263 4.75e-77

C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin; Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.


Pssm-ID: 133033 [Multi-domain]  Cd Length: 244  Bit Score: 247.61  E-value: 4.75e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2007691660  50 SLVVHFKDKQLIRHKKRWSQVMYLYYLLGwkvvtkyisirkavqlcqfLQKEKHNTYLLALDGDTDFQPAAVMLLIDRMR 129
Cdd:cd04190    39 VVCVIFDGAIKKNRGKRDSQLWFFNYFCR-------------------VLFPDDPEFILLVDADTKFDPDSIVQLYKAMD 99
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2007691660 130 LYPLVGAVCGRIHPTGS--GPMVWYQKFEYAVGHWLHKTAEHVFGCVLCSPGCFSLFRAAALMDDNVMKKYTIKASKAQ- 206
Cdd:cd04190   100 KDPEIGGVCGEIHPMGKkqGPLVMYQVFEYAISHWLDKAFESVFGFVTCLPGCFSMYRIEALKGDNGGKGPLLDYAYLTn 179
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2007691660 207 ------HYIQYDQGEDRWLCTLLLKQGWRVEYN--AASDAFTNAPEEFKEFYNQRRRWGPSTMAN 263
Cdd:cd04190   180 tvdslhKKNNLDLGEDRILCTLLLKAGPKRKYLyvPGAVAETDVPETFVELLSQRRRWINSTIAN 244
Chitin_synth_2 pfam03142
Chitin synthase; Members of this family are fungal chitin synthase EC:2.4.1.16 enzymes. They ...
106-439 2.27e-22

Chitin synthase; Members of this family are fungal chitin synthase EC:2.4.1.16 enzymes. They catalyze chitin synthesis as follows: UDP-N-acetyl-D-glucosamine + {(1,4)-(N-acetyl-beta-D-glucosaminyl)}(N) <=> UDP + {(1,4)-(N-acetyl-beta-D-glucosaminyl)}(N+1).


Pssm-ID: 367353 [Multi-domain]  Cd Length: 527  Bit Score: 101.38  E-value: 2.27e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2007691660 106 YLLALDGDTDFQPAAVMLLIDRMRLYPLVGAVCG--RIHPTGSGPMVWYQKFEYAVGHWLHKTAEHVFGCVLCSPGCFSL 183
Cdd:pfam03142 204 YVLMVDADTKVFPDSLTRMVACMVDDPEIMGLCGetKIANKRQSWVTAIQVFEYYISHHLSKAFESVFGGVTCLPGCFSM 283
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2007691660 184 FRAAALMD-DNVMKKYTIKASKAQHYIQYDQ-----------GEDRWLCTLLLKQ--GWRVEYNAASDAFTNAPEEFKEF 249
Cdd:pfam03142 284 YRIKAPKGgDGYWVPILASPDIVEHYSENVVdtlhkknllllGEDRYLTTLMLKTfpKRKTVFVPQAVCKTIAPDTFKVL 363
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2007691660 250 YNQRRRWGPSTMANIVDLLGTGSLITSRNPSMSRVYMLYLLfglassilapSTVVLMSAGSLTILLkihpnaaLVLAVIP 329
Cdd:pfam03142 364 LSQRRRWINSTVHNLMELVLVRDLCGTFCFSMQFVVFIELI----------GTVVLPAAIAFTVYL-------IVISILT 426
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2007691660 330 PAVYLGISFriksdtqILIAAVLSiLYAFLMMITAlviignivkdktiltpsslfiialagfylitalmhpQEAGLVVYG 409
Cdd:pfam03142 427 PDPVPVIPL-------VLLAAILG-LPAILILLTT------------------------------------RKWVYIGWM 462
                         330       340       350
                  ....*....|....*....|....*....|.
gi 2007691660 410 LLYILCIPSAYLLLAIYSMVNMNNVSWG-TR 439
Cdd:pfam03142 463 LVYLLALPIWNFVLPLYAFWHFDDFSWGnTR 493
Glyco_trans_2_3 pfam13632
Glycosyl transferase family group 2; Members of this family of prokaryotic proteins include ...
106-306 3.35e-12

Glycosyl transferase family group 2; Members of this family of prokaryotic proteins include putative glucosyltransferases, which are involved in bacterial capsule biosynthesis.


Pssm-ID: 433365 [Multi-domain]  Cd Length: 192  Bit Score: 65.82  E-value: 3.35e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2007691660 106 YLLALDGDTDFQPAAVMLLIDRMRlYPLVGAVCGRIHPTGSGP-MVWYQKFEYAVGHWLHKTAEHVFGCVLCSPGCFSLF 184
Cdd:pfam13632   1 WILLLDADTVLPPDCLLGIANEMA-SPEVAIIQGPILPMNVGNyLEELAALFFADDHGKSIPVRMALGRVLPFVGSGAFL 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2007691660 185 RAAALMDDNVMKKYTIkaskaqhyiqydqGEDRWLCTLLLKQGWRVEYNAASDAFTNAPEEFKEFYNQRRRW--GPSTMA 262
Cdd:pfam13632  80 RRSALQEVGGWDDGSV-------------SEDFDFGLRLQRAGYRVRFAPYSAVYEKSPLTFRDFLRQRRRWayGCLLIL 146
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....
gi 2007691660 263 NIVDLLGTGSLITSRNPSMSRVYMLYLLFGLASSILAPSTVVLM 306
Cdd:pfam13632 147 LIRLLGYLGTLLWSGLPLALLLLLLFSISSLALVLLLLALLAGL 190
CESA_like cd06423
CESA_like is the cellulose synthase superfamily; The cellulose synthase (CESA) superfamily ...
80-191 1.70e-11

CESA_like is the cellulose synthase superfamily; The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the elongation of beta-1,2 polyglucose chains of Glucan.


Pssm-ID: 133045 [Multi-domain]  Cd Length: 180  Bit Score: 63.40  E-value: 1.70e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2007691660  80 KVVTKYISIRKAVQLCQFLQKEKHnTYLLALDGDTDFQPAAVMLLIDRMRLYPLVGAVCGRIHP--TGSGPMVWYQKFEY 157
Cdd:cd06423    56 LVVRDKENGGKAGALNAGLRHAKG-DIVVVLDADTILEPDALKRLVVPFFADPKVGAVQGRVRVrnGSENLLTRLQAIEY 134
                          90       100       110
                  ....*....|....*....|....*....|....
gi 2007691660 158 AVGHWLHKTAEHVFGCVLCSPGCFSLFRAAALMD 191
Cdd:cd06423   135 LSIFRLGRRAQSALGGVLVLSGAFGAFRREALRE 168
BcsA COG1215
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1, ...
178-365 8.50e-11

Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility];


Pssm-ID: 440828 [Multi-domain]  Cd Length: 303  Bit Score: 63.61  E-value: 8.50e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2007691660 178 PGCFSLFRAAALMDDNVMKKYTIkaskaqhyiqydqGEDRWLCTLLLKQGWRVEYNAASDAFTNAPEEFKEFYNQRRRWG 257
Cdd:COG1215   144 SGANLAFRREALEEVGGFDEDTL-------------GEDLDLSLRLLRAGYRIVYVPDAVVYEEAPETLRALFRQRRRWA 210
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2007691660 258 pstmanivdlLGTGSLITSRNPSMSRVYMLYLLFGLASSILapstvvlmsagsltILLKIHPNAALVLAVIPpavYLGIS 337
Cdd:COG1215   211 ----------RGGLQLLLKHRPLLRPRRLLLFLLLLLLPLL--------------LLLLLLALLALLLLLLP---ALLLA 263
                         170       180
                  ....*....|....*....|....*...
gi 2007691660 338 FRIKSDTQILIAAVLSILYAFLMMITAL 365
Cdd:COG1215   264 LLLALRRRRLLLPLLHLLYGLLLLLAAL 291
GT2_HAS cd06434
Hyaluronan synthases catalyze polymerization of hyaluronan; Hyaluronan synthases (HASs) are ...
106-260 4.22e-10

Hyaluronan synthases catalyze polymerization of hyaluronan; Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.


Pssm-ID: 133056 [Multi-domain]  Cd Length: 235  Bit Score: 60.73  E-value: 4.22e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2007691660 106 YLLALDGDT----DFQPAAVMLLIDrmrlyPLVGAV--CGRIHPTGSGPMVWYQKFEYAVGHWLHKTAEHVFGCVLCSPG 179
Cdd:cd06434    80 IVVLLDSDTvwppNALPEMLKPFED-----PKVGGVgtNQRILRPRDSKWSFLAAEYLERRNEEIRAAMSYDGGVPCLSG 154
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2007691660 180 CFSLFRAAALMD-----DNVMKKYTIKASKAqhyiqydqGEDRWLCTLLLKQGWRVEYNAASDAFTNAPEEFKEFYNQRR 254
Cdd:cd06434   155 RTAAYRTEILKDflfleEFTNETFMGRRLNA--------GDDRFLTRYVLSHGYKTVYQYTSEAYTETPENYKKFLKQQL 226

                  ....*.
gi 2007691660 255 RWGPST 260
Cdd:cd06434   227 RWSRSN 232
CESA_like_1 cd06439
CESA_like_1 is a member of the cellulose synthase (CESA) superfamily; This is a subfamily of ...
103-255 2.65e-05

CESA_like_1 is a member of the cellulose synthase (CESA) superfamily; This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.


Pssm-ID: 133061 [Multi-domain]  Cd Length: 251  Bit Score: 46.42  E-value: 2.65e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2007691660 103 HNTYLLALDGD----TDfqpAAVMLLIDRMRLY------PLVGAVCGRIHPTGSGPMV----WYQKFEyavgHWLhKTAE 168
Cdd:cd06439   101 LNRALALATGEivvfTD---ANALLDPDALRLLvrhfadPSVGAVSGELVIVDGGGSGsgegLYWKYE----NWL-KRAE 172
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2007691660 169 HVFGCVLCSPGCFslfraaalmddnvmkkYTIKASKAQHYIQYDQGEDRWLCTLLLKQGWRVEYNAASDAFTNAPEEFKE 248
Cdd:cd06439   173 SRLGSTVGANGAI----------------YAIRRELFRPLPADTINDDFVLPLRIARQGYRVVYEPDAVAYEEVAEDGSE 236

                  ....*..
gi 2007691660 249 FYNQRRR 255
Cdd:cd06439   237 EFRRRVR 243
Glyco_tranf_2_3 pfam13641
Glycosyltransferase like family 2; Members of this family of prokaryotic proteins include ...
145-256 8.23e-04

Glycosyltransferase like family 2; Members of this family of prokaryotic proteins include putative glucosyltransferase, which are involved in bacterial capsule biosynthesis.


Pssm-ID: 433372 [Multi-domain]  Cd Length: 230  Bit Score: 41.59  E-value: 8.23e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2007691660 145 GSGPMVWYQKFEYAVGHWLHKTAEHVFGcVLCSPGCFSLFRAAALMDdnvmkkytIKASKAQHYIqydqGEDRWLCTLLL 224
Cdd:pfam13641 129 RSTMLSALGALEFALRHLRMMSLRLALG-VLPLSGAGSAIRREVLKE--------LGLFDPFFLL----GDDKSLGRRLR 195
                          90       100       110
                  ....*....|....*....|....*....|....
gi 2007691660 225 KQGWRVEYnaASDAFTNA--PEEFKEFYNQRRRW 256
Cdd:pfam13641 196 RHGWRVAY--APDAAVRTvfPTYLAASIKQRARW 227
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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