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Conserved domains on  [gi|1985340189|ref|XP_039379225|]
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dnaJ homolog subfamily B member 6 isoform X1 [Mauremys reevesii]

Protein Classification

molecular chaperone DnaJ( domain architecture ID 1000952)

molecular chaperone DnaJ, part of the DnaK-DnaJ-GrpE system, prevents the aggregation of unfolded substrate and acts primarily by stimulating the ATPase activity of Hsp70

CATH:  2.10.230.10
Gene Ontology:  GO:0051082|GO:0005524|GO:0009408|GO:0006457
PubMed:  8016869|15063739|29290615
SCOP:  4003813|4002149

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK10767 super family cl35946
chaperone protein DnaJ; Provisional
 3-107 1.17e-35

chaperone protein DnaJ; Provisional


The actual alignment was detected with superfamily member PRK10767:

Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 132.19  E-value: 1.17e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985340189   3 DYYDVLGVHRHASPEDIKKAYRKLALKWHPDKNPDNKeEAEMRFKQVAEAYEVLSDAKKRDIYDKYgkeglnggggggSH 82
Cdd:PRK10767    5 DYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDK-EAEEKFKEIKEAYEVLSDPQKRAAYDQY------------GH 71

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1985340189  83 --FD-----------SPFEYGFtfrnpEDVFREFFGGR 107
Cdd:PRK10767   72 aaFEqggggggfgggGGFGDIF-----GDIFGDIFGGG 104
 
Name Accession Description Interval E-value
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 3-107 1.17e-35

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 132.19  E-value: 1.17e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985340189   3 DYYDVLGVHRHASPEDIKKAYRKLALKWHPDKNPDNKeEAEMRFKQVAEAYEVLSDAKKRDIYDKYgkeglnggggggSH 82
Cdd:PRK10767    5 DYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDK-EAEEKFKEIKEAYEVLSDPQKRAAYDQY------------GH 71

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1985340189  83 --FD-----------SPFEYGFtfrnpEDVFREFFGGR 107
Cdd:PRK10767   72 aaFEqggggggfgggGGFGDIF-----GDIFGDIFGGG 104
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 3-66 4.68e-35

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 121.81  E-value: 4.68e-35
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1985340189   3 DYYDVLGVHRHASPEDIKKAYRKLALKWHPDKNPDNKeEAEMRFKQVAEAYEVLSDAKKRDIYD 66
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDP-EAEEKFKEINEAYEVLSDPEKRAIYD 63
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 3-106 5.72e-35

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 130.03  E-value: 5.72e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985340189   3 DYYDVLGVHRHASPEDIKKAYRKLALKWHPDKNPDnkEEAEMRFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGGSH 82
Cdd:TIGR02349   1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD--KEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGG 78

                          90       100
                  ....*....|....*....|....
gi 1985340189  83 FDSPFEYGFtFRNPEDVFREFFGG 106
Cdd:TIGR02349  79 GFNGFDIGF-FGDFGDIFGDFFGG 101
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 3-68 1.72e-32

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 117.50  E-value: 1.72e-32
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1985340189   3 DYYDVLGVHRHASPEDIKKAYRKLALKWHPDKNPDNKeEAEMRFKQVAEAYEVLSDAKKRDIYDKY 68
Cdd:COG0484     1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDP-EAEEKFKEINEAYEVLSDPEKRAAYDRF 65
DnaJ smart00271
DnaJ molecular chaperone homology domain;
2-61 8.93e-31

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 110.40  E-value: 8.93e-31
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985340189    2 VDYYDVLGVHRHASPEDIKKAYRKLALKWHPDKNPDNKEEAEMRFKQVAEAYEVLSDAKK 61
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 3-58 3.61e-28

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 103.39  E-value: 3.61e-28
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1985340189   3 DYYDVLGVHRHASPEDIKKAYRKLALKWHPDKNPDNkEEAEMRFKQVAEAYEVLSD 58
Cdd:cd06257     1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDD-PEAEEKFKEINEAYEVLSD 55
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
3-106 3.86e-25

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 104.52  E-value: 3.86e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985340189   3 DYYDVLGVHRHASPEDIKKAYRKLALKWHPDKNpdNKEEAEMRFKQVAEAYEVLSDAKKRDIYDKYgkeglnggggggSH 82
Cdd:NF037946    6 DYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRN--KAPDAAEIFAEINEAYEVLSNPEKRANYDKY------------GH 71

                          90       100
                  ....*....|....*....|....
gi 1985340189  83 FDSPFEYGFTFrNPEDVFREFFGG 106
Cdd:NF037946   72 DGVDGEGGFGF-DAFDVFSSFFET 94
 
Name Accession Description Interval E-value
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 3-107 1.17e-35

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 132.19  E-value: 1.17e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985340189   3 DYYDVLGVHRHASPEDIKKAYRKLALKWHPDKNPDNKeEAEMRFKQVAEAYEVLSDAKKRDIYDKYgkeglnggggggSH 82
Cdd:PRK10767    5 DYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDK-EAEEKFKEIKEAYEVLSDPQKRAAYDQY------------GH 71

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1985340189  83 --FD-----------SPFEYGFtfrnpEDVFREFFGGR 107
Cdd:PRK10767   72 aaFEqggggggfgggGGFGDIF-----GDIFGDIFGGG 104
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 3-66 4.68e-35

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 121.81  E-value: 4.68e-35
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1985340189   3 DYYDVLGVHRHASPEDIKKAYRKLALKWHPDKNPDNKeEAEMRFKQVAEAYEVLSDAKKRDIYD 66
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDP-EAEEKFKEINEAYEVLSDPEKRAIYD 63
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 3-106 5.72e-35

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 130.03  E-value: 5.72e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985340189   3 DYYDVLGVHRHASPEDIKKAYRKLALKWHPDKNPDnkEEAEMRFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGGSH 82
Cdd:TIGR02349   1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD--KEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGG 78

                          90       100
                  ....*....|....*....|....
gi 1985340189  83 FDSPFEYGFtFRNPEDVFREFFGG 106
Cdd:TIGR02349  79 GFNGFDIGF-FGDFGDIFGDFFGG 101
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 3-68 1.72e-32

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 117.50  E-value: 1.72e-32
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1985340189   3 DYYDVLGVHRHASPEDIKKAYRKLALKWHPDKNPDNKeEAEMRFKQVAEAYEVLSDAKKRDIYDKY 68
Cdd:COG0484     1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDP-EAEEKFKEINEAYEVLSDPEKRAAYDRF 65
DnaJ smart00271
DnaJ molecular chaperone homology domain;
2-61 8.93e-31

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 110.40  E-value: 8.93e-31
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985340189    2 VDYYDVLGVHRHASPEDIKKAYRKLALKWHPDKNPDNKEEAEMRFKQVAEAYEVLSDAKK 61
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60
PRK14294 PRK14294
chaperone protein DnaJ; Provisional
 3-105 8.18e-30

chaperone protein DnaJ; Provisional


Pssm-ID: 237664 [Multi-domain]  Cd Length: 366  Bit Score: 116.40  E-value: 8.18e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985340189   3 DYYDVLGVHRHASPEDIKKAYRKLALKWHPDKNPDNKeEAEMRFKQVAEAYEVLSDAKKRDIYDKYGKEG-LNGGGGGGS 81
Cdd:PRK14294    5 DYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDK-EAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGlSGTGFSGFS 83

                          90       100
                  ....*....|....*....|....*
gi 1985340189  82 HFDSPF-EYGftfrnpeDVFREFFG 105
Cdd:PRK14294   84 GFDDIFsSFG-------DIFEDFFG 101
PRK14290 PRK14290
chaperone protein DnaJ; Provisional
 3-106 3.02e-28

chaperone protein DnaJ; Provisional


Pssm-ID: 172778 [Multi-domain]  Cd Length: 365  Bit Score: 112.33  E-value: 3.02e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985340189   3 DYYDVLGVHRHASPEDIKKAYRKLALKWHPDKNPDNKEEAEMRFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGgggsh 82
Cdd:PRK14290    4 DYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDFGAGG----- 78

                          90       100
                  ....*....|....*....|....*.
gi 1985340189  83 fdSPFEY-GFT-FRNPEDVFREFFGG 106
Cdd:PRK14290   79 --SNFNWdNFThFSDINDIFNQIFGG 102
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 3-58 3.61e-28

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 103.39  E-value: 3.61e-28
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1985340189   3 DYYDVLGVHRHASPEDIKKAYRKLALKWHPDKNPDNkEEAEMRFKQVAEAYEVLSD 58
Cdd:cd06257     1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDD-PEAEEKFKEINEAYEVLSD 55
PRK14282 PRK14282
chaperone protein DnaJ; Provisional
 3-107 1.26e-27

chaperone protein DnaJ; Provisional


Pssm-ID: 184603 [Multi-domain]  Cd Length: 369  Bit Score: 110.65  E-value: 1.26e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985340189   3 DYYDVLGVHRHASPEDIKKAYRKLALKWHPDKNPDNKEEAEMRFKQVAEAYEVLSDAKKRDIYDKY----GKEGLNGGGG 78
Cdd:PRK14282    5 DYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFgyvgEQPPYQETES 84

                          90       100       110
                  ....*....|....*....|....*....|
gi 1985340189  79 GGSHFDSPF-EYGFTFRNpeDVFREFFGGR 107
Cdd:PRK14282   85 GGGFFEDIFkDFENIFNR--DIFDIFFGER 112
PRK14284 PRK14284
chaperone protein DnaJ; Provisional
 3-105 1.79e-27

chaperone protein DnaJ; Provisional


Pssm-ID: 237658 [Multi-domain]  Cd Length: 391  Bit Score: 110.70  E-value: 1.79e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985340189   3 DYYDVLGVHRHASPEDIKKAYRKLALKWHPDKNPDNKeEAEMRFKQVAEAYEVLSDAKKRDIYDKYGKeglnggggggsh 82
Cdd:PRK14284    2 DYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDA-EAEKRFKEVSEAYEVLSDAQKRESYDRYGK------------ 68

                          90       100
                  ....*....|....*....|....*...
gi 1985340189  83 fDSPFEY-----GFTFRNPEDVFREFFG 105
Cdd:PRK14284   69 -DGPFAGaggfgGAGMGNMEDALRTFMG 95
PRK14301 PRK14301
chaperone protein DnaJ; Provisional
 3-105 2.75e-26

chaperone protein DnaJ; Provisional


Pssm-ID: 237668 [Multi-domain]  Cd Length: 373  Bit Score: 107.14  E-value: 2.75e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985340189   3 DYYDVLGVHRHASPEDIKKAYRKLALKWHPDKNPDNkEEAEMRFKQVAEAYEVLSDAKKRDIYDKYgKEGLNGGGGGGSH 82
Cdd:PRK14301    5 DYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDN-PEAEQKFKEAAEAYEVLRDAEKRARYDRF-GHAGVNGNGGFGG 82

                          90       100
                  ....*....|....*....|...
gi 1985340189  83 FDSPFEygfTFRNPEDVFREFFG 105
Cdd:PRK14301   83 FSSAED---IFSHFSDIFGDLFG 102
PRK14291 PRK14291
chaperone protein DnaJ; Provisional
 3-106 2.86e-26

chaperone protein DnaJ; Provisional


Pssm-ID: 237661 [Multi-domain]  Cd Length: 382  Bit Score: 107.16  E-value: 2.86e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985340189   3 DYYDVLGVHRHASPEDIKKAYRKLALKWHPDKNPDnkEEAEMRFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGGSH 82
Cdd:PRK14291    4 DYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKN--PEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSGQQQQG 81

                          90       100
                  ....*....|....*....|....
gi 1985340189  83 FDSpfEYGFTFRNPEDVFREFFGG 106
Cdd:PRK14291   82 QEG--FSDFGGGNIEDILEDVFDI 103
PRK14280 PRK14280
molecular chaperone DnaJ;
3-109 2.90e-26

molecular chaperone DnaJ;


Pssm-ID: 237656 [Multi-domain]  Cd Length: 376  Bit Score: 107.11  E-value: 2.90e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985340189   3 DYYDVLGVHRHASPEDIKKAYRKLALKWHPDKNpdnKEE-AEMRFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGGS 81
Cdd:PRK14280    5 DYYEVLGVSKSASKDEIKKAYRKLSKKYHPDIN---KEEgADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPNQGFGGGG 81

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1985340189  82 HFDSPFEYGFTFrnpEDVFREFFGG----RDP 109
Cdd:PRK14280   82 FGGGDFGGGFGF---EDIFSSFFGGggrrRDP 110
SEC63 COG5407
Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular ...
 3-62 3.81e-26

Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 444165 [Multi-domain]  Cd Length: 61  Bit Score: 98.53  E-value: 3.81e-26
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985340189   3 DYYDVLGVHRHASPEDIKKAYRKLALKWHPDKNPDNKeEAEMRFKQVAEAYEVLSDAKKR 62
Cdd:COG5407     1 DPYEVLGVAKTASADEIKKAYRKLAKKYHPDRNKGDP-KAEERFKEINEAYELLSDAEKR 59
PRK14281 PRK14281
chaperone protein DnaJ; Provisional
 3-68 6.02e-26

chaperone protein DnaJ; Provisional


Pssm-ID: 237657 [Multi-domain]  Cd Length: 397  Bit Score: 106.43  E-value: 6.02e-26
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1985340189   3 DYYDVLGVHRHASPEDIKKAYRKLALKWHPDKNPDNKeEAEMRFKQVAEAYEVLSDAKKRDIYDKY 68
Cdd:PRK14281    4 DYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNK-EAEEHFKEVNEAYEVLSNDDKRRRYDQF 68
PRK14278 PRK14278
chaperone protein DnaJ; Provisional
 3-106 1.65e-25

chaperone protein DnaJ; Provisional


Pssm-ID: 237654 [Multi-domain]  Cd Length: 378  Bit Score: 104.75  E-value: 1.65e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985340189   3 DYYDVLGVHRHASPEDIKKAYRKLALKWHPDKNPDnkEEAEMRFKQVAEAYEVLSDAKKRDIYDKYGkeglnggggggsh 82
Cdd:PRK14278    4 DYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPD--EEAQEKFKEISVAYEVLSDPEKRRIVDLGG------------- 68

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1985340189  83 fdSPFE--------YGFTFRNPEDVFREFFGG 106
Cdd:PRK14278   69 --DPLEsaggggggFGGGFGGLGDVFEAFFGG 98
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
3-106 3.86e-25

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 104.52  E-value: 3.86e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985340189   3 DYYDVLGVHRHASPEDIKKAYRKLALKWHPDKNpdNKEEAEMRFKQVAEAYEVLSDAKKRDIYDKYgkeglnggggggSH 82
Cdd:NF037946    6 DYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRN--KAPDAAEIFAEINEAYEVLSNPEKRANYDKY------------GH 71

                          90       100
                  ....*....|....*....|....
gi 1985340189  83 FDSPFEYGFTFrNPEDVFREFFGG 106
Cdd:NF037946   72 DGVDGEGGFGF-DAFDVFSSFFET 94
PRK14276 PRK14276
chaperone protein DnaJ; Provisional
 3-109 4.20e-25

chaperone protein DnaJ; Provisional


Pssm-ID: 237653 [Multi-domain]  Cd Length: 380  Bit Score: 103.63  E-value: 4.20e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985340189   3 DYYDVLGVHRHASPEDIKKAYRKLALKWHPDKnpdNKEE-AEMRFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGGS 81
Cdd:PRK14276    5 EYYDRLGVSKDASQDEIKKAYRKLSKKYHPDI---NKEPgAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANGGFGGGA 81

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1985340189  82 HFDSPFEYGFTFRNPEDVFREFFGG----RDP 109
Cdd:PRK14276   82 GGFGGFDGSGGFGGFEDIFSSFFGGggarRNP 113
PRK14298 PRK14298
chaperone protein DnaJ; Provisional
 3-106 4.65e-25

chaperone protein DnaJ; Provisional


Pssm-ID: 184612 [Multi-domain]  Cd Length: 377  Bit Score: 103.78  E-value: 4.65e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985340189   3 DYYDVLGVHRHASPEDIKKAYRKLALKWHPDKNPDnkEEAEMRFKQVAEAYEVLSDAKKRDIYDKYgkeglnggggGGSH 82
Cdd:PRK14298    6 DYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKE--PDAEEKFKEISEAYAVLSDAEKRAQYDRF----------GHAG 73

                          90       100
                  ....*....|....*....|....*....
gi 1985340189  83 FDSPFEYGFTFRNP-----EDVFREFFGG 106
Cdd:PRK14298   74 IDNQYSAEDIFRGAdfggfGDIFEMFFGG 102
PRK14277 PRK14277
chaperone protein DnaJ; Provisional
 3-105 1.52e-24

chaperone protein DnaJ; Provisional


Pssm-ID: 184599 [Multi-domain]  Cd Length: 386  Bit Score: 102.19  E-value: 1.52e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985340189   3 DYYDVLGVHRHASPEDIKKAYRKLALKWHPDKNPDNKeEAEMRFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGGSH 82
Cdd:PRK14277    6 DYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDK-EAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPGGFGQGG 84

                          90       100
                  ....*....|....*....|....*..
gi 1985340189  83 F-DSPFEYG---FTFRNPEDVFREFFG 105
Cdd:PRK14277   85 FgQGGFGGGgfdFDFGGFGDIFEDIFG 111
CbpA COG2214
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];
1-66 1.56e-24

Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];


Pssm-ID: 441816 [Multi-domain]  Cd Length: 91  Bit Score: 95.17  E-value: 1.56e-24
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1985340189   1 MVDYYDVLGVHRHASPEDIKKAYRKLALKWHPDKNPDNKEEAEMRFKQVAEAYEVLSDAKKRDIYD 66
Cdd:COG2214     4 LKDHYAVLGVPPDASLEEIRQAYRRLAKLLHPDRGGELKALAEELFQRLNEAYEVLSDPERRAEYD 69
PRK14297 PRK14297
molecular chaperone DnaJ;
3-106 1.84e-24

molecular chaperone DnaJ;


Pssm-ID: 184611 [Multi-domain]  Cd Length: 380  Bit Score: 102.17  E-value: 1.84e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985340189   3 DYYDVLGVHRHASPEDIKKAYRKLALKWHPDKNPDNKeEAEMRFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGGSH 82
Cdd:PRK14297    5 DYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNK-EAEEKFKEINEAYQVLSDPQKKAQYDQFGTADFNGAGGFGSG 83

                          90       100
                  ....*....|....*....|....*...
gi 1985340189  83 ----FDSPFEYGFtfrnpEDVFREFFGG 106
Cdd:PRK14297   84 gfggFDFSDMGGF-----GDIFDSFFGG 106
PRK14289 PRK14289
molecular chaperone DnaJ;
3-68 4.65e-24

molecular chaperone DnaJ;


Pssm-ID: 237660 [Multi-domain]  Cd Length: 386  Bit Score: 101.06  E-value: 4.65e-24
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1985340189   3 DYYDVLGVHRHASPEDIKKAYRKLALKWHPDKNPDNKeEAEMRFKQVAEAYEVLSDAKKRDIYDKY 68
Cdd:PRK14289    6 DYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDK-EAEEKFKEAAEAYDVLSDPDKRSRYDQF 70
PRK14279 PRK14279
molecular chaperone DnaJ;
3-66 1.04e-23

molecular chaperone DnaJ;


Pssm-ID: 237655 [Multi-domain]  Cd Length: 392  Bit Score: 100.19  E-value: 1.04e-23
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1985340189   3 DYYDVLGVHRHASPEDIKKAYRKLALKWHPDKNPDNKeEAEMRFKQVAEAYEVLSDAKKRDIYD 66
Cdd:PRK14279   10 DFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDP-AAEERFKAVSEAHDVLSDPAKRKEYD 72
PRK14292 PRK14292
chaperone protein DnaJ; Provisional
 1-106 3.79e-23

chaperone protein DnaJ; Provisional


Pssm-ID: 237662 [Multi-domain]  Cd Length: 371  Bit Score: 98.42  E-value: 3.79e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985340189   1 MVDYYDVLGVHRHASPEDIKKAYRKLALKWHPDKNPDnkEEAEMRFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGg 80
Cdd:PRK14292    1 MMDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKE--KGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAPGAGMPGG- 77

                          90       100
                  ....*....|....*....|....*.
gi 1985340189  81 shfdSPFeyGFTFRNPEDVFREFFGG 106
Cdd:PRK14292   78 ----DPF--GGMGFDPMDIFEQLFGG 97
PRK14286 PRK14286
chaperone protein DnaJ; Provisional
 4-106 1.68e-22

chaperone protein DnaJ; Provisional


Pssm-ID: 172774 [Multi-domain]  Cd Length: 372  Bit Score: 96.60  E-value: 1.68e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985340189   4 YYDVLGVHRHASPEDIKKAYRKLALKWHPDKNPDNKeEAEMRFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGGSHf 83
Cdd:PRK14286    6 YYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNK-ESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNAGAGGFGQ- 83

                          90       100
                  ....*....|....*....|...
gi 1985340189  84 DSPFEYGFTFRNPEDVFREFFGG 106
Cdd:PRK14286   84 GAYTDFSDIFGDFGDIFGDFFGG 106
PRK14299 PRK14299
chaperone protein DnaJ; Provisional
 3-107 4.58e-22

chaperone protein DnaJ; Provisional


Pssm-ID: 237667 [Multi-domain]  Cd Length: 291  Bit Score: 93.85  E-value: 4.58e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985340189   3 DYYDVLGVHRHASPEDIKKAYRKLALKWHPDKNPDnkEEAEMRFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGGSH 82
Cdd:PRK14299    5 DYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKS--PGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGWQGPPP 82

                          90       100
                  ....*....|....*....|....*...
gi 1985340189  83 fDSPFEYGFTFRNPED---VFREFFGGR 107
Cdd:PRK14299   83 -GPPGGGDFSGFNVGDfsdFFQQLFGGR 109
PRK14285 PRK14285
chaperone protein DnaJ; Provisional
 3-107 1.45e-21

chaperone protein DnaJ; Provisional


Pssm-ID: 172773 [Multi-domain]  Cd Length: 365  Bit Score: 93.90  E-value: 1.45e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985340189   3 DYYDVLGVHRHASPEDIKKAYRKLALKWHPDKNPDNKeEAEMRFKQVAEAYEVLSDAKKRDIYDKYgKEGLNGGGGGGSH 82
Cdd:PRK14285    4 DYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNK-EAESIFKEATEAYEVLIDDNKRAQYDRF-GHTAFEGGGGFEG 81

                          90       100
                  ....*....|....*....|....*..
gi 1985340189  83 FDSPFEyGFT--FRNPEDVFREFFGGR 107
Cdd:PRK14285   82 FSGGFS-GFSdiFEDFGDIFDSFFTGN 107
PRK14293 PRK14293
molecular chaperone DnaJ;
1-68 1.53e-21

molecular chaperone DnaJ;


Pssm-ID: 237663 [Multi-domain]  Cd Length: 374  Bit Score: 93.90  E-value: 1.53e-21
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1985340189   1 MVDYYDVLGVHRHASPEDIKKAYRKLALKWHPDKnpdNKEE-AEMRFKQVAEAYEVLSDAKKRDIYDKY 68
Cdd:PRK14293    2 AADYYEILGVSRDADKDELKRAYRRLARKYHPDV---NKEPgAEDRFKEINRAYEVLSDPETRARYDQF 67
PRK14283 PRK14283
chaperone protein DnaJ; Provisional
 3-106 2.14e-21

chaperone protein DnaJ; Provisional


Pssm-ID: 184604 [Multi-domain]  Cd Length: 378  Bit Score: 93.35  E-value: 2.14e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985340189   3 DYYDVLGVHRHASPEDIKKAYRKLALKWHPDKNPDnkEEAEMRFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGGSH 82
Cdd:PRK14283    6 DYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEE--EGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGMDGFSQEDIF 83

                          90       100
                  ....*....|....*....|....*....
gi 1985340189  83 FDSPFE-----YGFTFRNPEDVFRefFGG 106
Cdd:PRK14283   84 NNINFEdifqgFGFGIGNIFDMFG--FGG 110
PRK14295 PRK14295
molecular chaperone DnaJ;
3-66 2.49e-20

molecular chaperone DnaJ;


Pssm-ID: 237665 [Multi-domain]  Cd Length: 389  Bit Score: 90.29  E-value: 2.49e-20
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1985340189   3 DYYDVLGVHRHASPEDIKKAYRKLALKWHPDKNPDNKeEAEMRFKQVAEAYEVLSDAKKRDIYD 66
Cdd:PRK14295   10 DYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDA-KAEERFKEISEAYDVLSDEKKRKEYD 72
termin_org_DnaJ TIGR03835
terminal organelle assembly protein TopJ; This model describes TopJ (MG_200, CbpA), a DnaJ ...
 3-104 1.03e-17

terminal organelle assembly protein TopJ; This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 274808 [Multi-domain]  Cd Length: 871  Bit Score: 84.10  E-value: 1.03e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985340189   3 DYYDVLGVHRHASPEDIKKAYRKLALKWHPDKNpdNKEEAEMRFKQVAEAYEVLSDAKKRDIYDKYgkeglnggggggSH 82
Cdd:TIGR03835   3 DYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRN--KAPDAASIFAEINEANDVLSNPKKRANYDKY------------GH 68

                          90       100
                  ....*....|....*....|..
gi 1985340189  83 FDSPFEYGFTFRnpEDVFREFF 104
Cdd:TIGR03835  69 DGVDREDDFDFQ--ADVFNSFF 88
PTZ00037 PTZ00037
DnaJ_C chaperone protein; Provisional
 4-106 1.11e-17

DnaJ_C chaperone protein; Provisional


Pssm-ID: 240236 [Multi-domain]  Cd Length: 421  Bit Score: 82.95  E-value: 1.11e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985340189   4 YYDVLGVHRHASPEDIKKAYRKLALKWHPDKNPDNKeeaemRFKQVAEAYEVLSDAKKRDIYDKYGkeglnggggggshf 83
Cdd:PTZ00037   30 LYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGDPE-----KFKEISRAYEVLSDPEKRKIYDEYG-------------- 90

                          90       100
                  ....*....|....*....|...
gi 1985340189  84 DSPFEYGFTFRNPEDVFREFFGG 106
Cdd:PTZ00037   91 EEGLEGGEQPADASDLFDLIFGG 113
PRK14288 PRK14288
molecular chaperone DnaJ;
2-88 1.69e-17

molecular chaperone DnaJ;


Pssm-ID: 172776 [Multi-domain]  Cd Length: 369  Bit Score: 82.04  E-value: 1.69e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985340189   2 VDYYDVLGVHRHASPEDIKKAYRKLALKWHPDKNPDNKEeAEMRFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGGS 81
Cdd:PRK14288    3 LSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKE-AEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQAGASQS 81


                  ....*..
gi 1985340189  82 HFDSPFE 88
Cdd:PRK14288   82 DFSDFFE 88
PRK14287 PRK14287
chaperone protein DnaJ; Provisional
 3-106 1.71e-17

chaperone protein DnaJ; Provisional


Pssm-ID: 237659 [Multi-domain]  Cd Length: 371  Bit Score: 81.98  E-value: 1.71e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985340189   3 DYYDVLGVHRHASPEDIKKAYRKLALKWHPDKNpdNKEEAEMRFKQVAEAYEVLSDAKKRDIYDKYgkeglnggggggSH 82
Cdd:PRK14287    5 DYYEVLGVDRNASVDEVKKAYRKLARKYHPDVN--KAPDAEDKFKEVKEAYDTLSDPQKKAHYDQF------------GH 70

                          90       100
                  ....*....|....*....|....*...
gi 1985340189  83 FDSPFEYGFT----FRNPEDVFREFFGG 106
Cdd:PRK14287   71 TDPNQGFGGGgagdFGGFSDIFDMFFGG 98
PRK10266 PRK10266
curved DNA-binding protein;
3-105 4.91e-16

curved DNA-binding protein;


Pssm-ID: 182347 [Multi-domain]  Cd Length: 306  Bit Score: 77.17  E-value: 4.91e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985340189   3 DYYDVLGVHRHASPEDIKKAYRKLALKWHPD--KNPDnkeeAEMRFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGG 80
Cdd:PRK10266    5 DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDvsKEPD----AEARFKEVAEAWEVLSDEQRRAEYDQLWQHRNDPQFNRQ 80

                          90       100
                  ....*....|....*....|....*
gi 1985340189  81 SHFDSPFEYGftFRNPEDVFREFFG 105
Cdd:PRK10266   81 FQHGDGQSFN--AEDFDDIFSSIFG 103
PRK14296 PRK14296
chaperone protein DnaJ; Provisional
 3-105 1.32e-15

chaperone protein DnaJ; Provisional


Pssm-ID: 237666 [Multi-domain]  Cd Length: 372  Bit Score: 76.52  E-value: 1.32e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985340189   3 DYYDVLGVHRHASPEDIKKAYRKLALKWHPDKNpdNKEEAEMRFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGGSH 82
Cdd:PRK14296    5 DYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLN--KSPDAHDKMVEINEAADVLLDKDKRKQYDQFGHAAFDGSSGFSSN 82

                          90       100
                  ....*....|....*....|....*....
gi 1985340189  83 FdSPFEYGFT------FRNPEDVFREFFG 105
Cdd:PRK14296   83 F-GDFEDLFSnmgssgFSSFTNIFSDFFG 110
DjlA COG1076
DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];
1-64 3.19e-15

DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440694 [Multi-domain]  Cd Length: 75  Bit Score: 69.44  E-value: 3.19e-15
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1985340189   1 MVDYYDVLGVHRHASPEDIKKAYRKLALKWHPDK-----NPDNKEEAEMRFKQVAEAYEVLSDAKKRDI 64
Cdd:COG1076     3 LDDAFELLGLPPDADDAELKRAYRKLQREHHPDRlaaglPEEEQRLALQKAAAINEAYETLKDPRGIDL 71
PRK14300 PRK14300
chaperone protein DnaJ; Provisional
 3-68 1.50e-14

chaperone protein DnaJ; Provisional


Pssm-ID: 172788 [Multi-domain]  Cd Length: 372  Bit Score: 73.51  E-value: 1.50e-14
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1985340189   3 DYYDVLGVHRHASPEDIKKAYRKLALKWHPDKNpdNKEEAEMRFKQVAEAYEVLSDAKKRDIYDKY 68
Cdd:PRK14300    4 DYYQILGVSKTASQADLKKAYLKLAKQYHPDTT--DAKDAEKKFKEINAAYDVLKDEQKRAAYDRF 67
PTZ00341 PTZ00341
Ring-infected erythrocyte surface antigen; Provisional
 4-68 1.68e-10

Ring-infected erythrocyte surface antigen; Provisional


Pssm-ID: 173534 [Multi-domain]  Cd Length: 1136  Bit Score: 62.11  E-value: 1.68e-10
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1985340189    4 YYDVLGVHRHASPEDIKKAYRKLALKWHPDKNPDNkeEAEMRFKQVAEAYEVLSDAKKRDIYDKY 68
Cdd:PTZ00341   575 FYDILGVGVNADMKEISERYFKLAENYYPPKRSGN--EGFHKFKKINEAYQILGDIDKKKMYNKF 637
ZUO1 COG5269
Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / ...
 2-66 1.60e-06

Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227594 [Multi-domain]  Cd Length: 379  Bit Score: 49.26  E-value: 1.60e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985340189   2 VDYYDVLGVHRH---ASPEDIKKAYRKLALKWHPDKNP--DNKEEAEMrFKQVAEAYEVLSDAKKRDIYD 66
Cdd:COG5269    43 VDLYALLGLSKYrtkAIPPQILKAHKKKVYKYHPDKTAagGNKGCDEF-FKLIQKAREVLGDRKLRLQYD 111
djlA PRK09430
co-chaperone DjlA;
3-34 3.36e-05

co-chaperone DjlA;


Pssm-ID: 236512 [Multi-domain]  Cd Length: 267  Bit Score: 44.80  E-value: 3.36e-05
                          10        20        30
                  ....*....|....*....|....*....|..
gi 1985340189   3 DYYDVLGVHRHASPEDIKKAYRKLALKWHPDK 34
Cdd:PRK09430  201 DAYKVLGVSESDDDQEIKRAYRKLMSEHHPDK 232
hscB PRK01356
co-chaperone HscB; Provisional
 1-65 1.75e-03

co-chaperone HscB; Provisional


Pssm-ID: 167217 [Multi-domain]  Cd Length: 166  Bit Score: 38.70  E-value: 1.75e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1985340189   1 MVDYYDVLGVHRHASP--EDIKKAYRKLALKWHPD--KNPDNKEEAEMRFKQVAEAYEVLSDAKKRDIY 65
Cdd:PRK01356    1 MQNYFQLLGLPQEYNIdlKILEKQYFAMQVKYHPDkaKTLQEKEQNLIIASELNNAYSTLKDALKRAEY 69
PHA03102 PHA03102
Small T antigen; Reviewed
 6-62 1.87e-03

Small T antigen; Reviewed


Pssm-ID: 222986 [Multi-domain]  Cd Length: 153  Bit Score: 38.11  E-value: 1.87e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1985340189   6 DVLGVHRHA--SPEDIKKAYRKLALKWHPDKNPDnkeEAEMrfKQVAEAYEVLSDAKKR 62
Cdd:PHA03102    9 DLLGLPRSAwgNLPLMRKAYLRKCLEFHPDKGGD---EEKM--KELNTLYKKFRESVKS 62
PHA02624 PHA02624
large T antigen; Provisional
 6-62 9.72e-03

large T antigen; Provisional


Pssm-ID: 222912 [Multi-domain]  Cd Length: 647  Bit Score: 37.66  E-value: 9.72e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1985340189   6 DVLGVHRHA--SPEDIKKAYRKLALKWHPDKNPDnkeEAEMrfKQVAEAYEVLSDAKKR 62
Cdd:PHA02624   15 DLLGLPMAAwgNLPLMRKAYLRKCKEYHPDKGGD---EEKM--KRLNSLYKKLQEGVKS 68
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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