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Conserved domains on  [gi|1974316043|ref|XP_039187094|]
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secreted frizzled-related protein 5-like isoform X7 [Crotalus tigris]

Protein Classification

frizzled family protein( domain architecture ID 10165218)

frizzled family protein similar to the ten frizzleds (Fzd1-10) and smoothened (Smo), which are involved in transmitting the signals of Wnts and hedgehog proteins and are seven transmembrane-spanning proteins that constitute an unconventional class of G protein-coupled receptors; contains an N-terminal extracellular cysteine-rich domain (CRD) associated with their role in binding to Wnt ligands

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
CRD_SFRP5 cd07444
Cysteine-rich domain of the secreted frizzled-related protein 5 (SFRP5), a regulator of Wnt ...
45-171 4.37e-91

Cysteine-rich domain of the secreted frizzled-related protein 5 (SFRP5), a regulator of Wnt activity; The cysteine-rich domain (CRD) is an essential part of the secreted frizzled-related Protein 5 (SFRP5), which regulates the activity of Wnt proteins, key players in a number of fundamental cellular processes such as embryogenesis and postnatal development. SFRPs antagonize the activation of Wnt signaling by binding to the CRD domains of frizzled (Fz) proteins, thereby preventing Wnt proteins from binding to these receptors. SFRPs are also known to have functions unrelated to Wnt, as enhancers of procollagen cleavage by the TLD proteinases. SFRPs and Fz proteins both contain CRD domains, but SFRPs lack the seven-pass transmembrane domain which is an integral part of Fzs.


:

Pssm-ID: 143553  Cd Length: 127  Bit Score: 266.81  E-value: 4.37e-91
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1974316043  45 YTKQSQCVDIPADLQLCHNVGYKRMRLPNLLEHDSMPEIKQQANSWVPLLAKRCHSDTQIFLCSLFTPVCLDQPIYPCRS 124
Cdd:cd07444     1 YSKQPQCVDIPADLPLCHNVGYKRMRLPNLLEHESMAEVKQQASSWVPLLAKRCHADTQVFLCSLFAPVCLDRPIYPCRS 80
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 1974316043 125 LCEVVRDSCAPVMESYGFPWPDMLNCNKFPFDNDLCITVQFGNNQVT 171
Cdd:cd07444    81 LCEAVRDSCAPVMESYGFPWPEMLHCHKFPLDNDLCIAVQFGHLQAT 127
NTR_Sfrp1_like cd03580
NTR domain, Secreted frizzled-related protein (Sfrp) 1-like subfamily; composed of proteins ...
176-301 2.36e-56

NTR domain, Secreted frizzled-related protein (Sfrp) 1-like subfamily; composed of proteins similar to human Sfrp1, Sfrp2 and Sfrp5. Sfrps are soluble proteins containing an NTR domain C-terminal to a cysteine-rich Frizzled domain. They show diverse functions and are thought to work in Wnt signaling indirectly, as modulators or antagonists by binding Wnt ligands, and directly, via the Wnt receptor, Frizzled. They participate in regulating the patterning along the anteroposterior axis in vertebrates. Human Sfrp1 has been found frequently to be downregulated in breast cancer and is associated with disease progression and poor prognosis.


:

Pssm-ID: 239635  Cd Length: 126  Bit Score: 178.26  E-value: 2.36e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1974316043 176 SRICTQCEIEHK-ADGIMEQMCSSDFVVKMHIKEIKKENGERRLVAtQKKKKVLKVGPLKRKDTKKLVLYMKNAGTCPCP 254
Cdd:cd03580     1 PKVCPPCENEEEsAKTLLDNFCASDFALKVKIKEISYENGDRKVIG-EKKKEILKQGPLKKKDLKKLVLWLKNGANCPCP 79
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 1974316043 255 QLDDLSGSFLVMGRKVGGRLLVLAIYRWEKKNKEMKFAVKFMFSYPC 301
Cdd:cd03580    80 QLDNLNGVYLVMGRKVDGKLLLTSIYKWQKKNKEFKRAVRKWKKHKC 126
 
Name Accession Description Interval E-value
CRD_SFRP5 cd07444
Cysteine-rich domain of the secreted frizzled-related protein 5 (SFRP5), a regulator of Wnt ...
45-171 4.37e-91

Cysteine-rich domain of the secreted frizzled-related protein 5 (SFRP5), a regulator of Wnt activity; The cysteine-rich domain (CRD) is an essential part of the secreted frizzled-related Protein 5 (SFRP5), which regulates the activity of Wnt proteins, key players in a number of fundamental cellular processes such as embryogenesis and postnatal development. SFRPs antagonize the activation of Wnt signaling by binding to the CRD domains of frizzled (Fz) proteins, thereby preventing Wnt proteins from binding to these receptors. SFRPs are also known to have functions unrelated to Wnt, as enhancers of procollagen cleavage by the TLD proteinases. SFRPs and Fz proteins both contain CRD domains, but SFRPs lack the seven-pass transmembrane domain which is an integral part of Fzs.


Pssm-ID: 143553  Cd Length: 127  Bit Score: 266.81  E-value: 4.37e-91
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1974316043  45 YTKQSQCVDIPADLQLCHNVGYKRMRLPNLLEHDSMPEIKQQANSWVPLLAKRCHSDTQIFLCSLFTPVCLDQPIYPCRS 124
Cdd:cd07444     1 YSKQPQCVDIPADLPLCHNVGYKRMRLPNLLEHESMAEVKQQASSWVPLLAKRCHADTQVFLCSLFAPVCLDRPIYPCRS 80
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 1974316043 125 LCEVVRDSCAPVMESYGFPWPDMLNCNKFPFDNDLCITVQFGNNQVT 171
Cdd:cd07444    81 LCEAVRDSCAPVMESYGFPWPEMLHCHKFPLDNDLCIAVQFGHLQAT 127
NTR_Sfrp1_like cd03580
NTR domain, Secreted frizzled-related protein (Sfrp) 1-like subfamily; composed of proteins ...
176-301 2.36e-56

NTR domain, Secreted frizzled-related protein (Sfrp) 1-like subfamily; composed of proteins similar to human Sfrp1, Sfrp2 and Sfrp5. Sfrps are soluble proteins containing an NTR domain C-terminal to a cysteine-rich Frizzled domain. They show diverse functions and are thought to work in Wnt signaling indirectly, as modulators or antagonists by binding Wnt ligands, and directly, via the Wnt receptor, Frizzled. They participate in regulating the patterning along the anteroposterior axis in vertebrates. Human Sfrp1 has been found frequently to be downregulated in breast cancer and is associated with disease progression and poor prognosis.


Pssm-ID: 239635  Cd Length: 126  Bit Score: 178.26  E-value: 2.36e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1974316043 176 SRICTQCEIEHK-ADGIMEQMCSSDFVVKMHIKEIKKENGERRLVAtQKKKKVLKVGPLKRKDTKKLVLYMKNAGTCPCP 254
Cdd:cd03580     1 PKVCPPCENEEEsAKTLLDNFCASDFALKVKIKEISYENGDRKVIG-EKKKEILKQGPLKKKDLKKLVLWLKNGANCPCP 79
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 1974316043 255 QLDDLSGSFLVMGRKVGGRLLVLAIYRWEKKNKEMKFAVKFMFSYPC 301
Cdd:cd03580    80 QLDNLNGVYLVMGRKVDGKLLLTSIYKWQKKNKEFKRAVRKWKKHKC 126
FRI smart00063
Frizzled; Drosophila melanogaster frizzled mediates signalling that polarises a precursor cell ...
54-161 1.11e-48

Frizzled; Drosophila melanogaster frizzled mediates signalling that polarises a precursor cell along the anteroposterior axis. Homologues of the N-terminal region of frizzled exist either as transmembrane or secreted molecules. Frizzled homologues are reported to be receptors for the Wnt growth factors. (Not yet in MEDLINE: the FRI domain occurs in several receptor tyrosine kinases [Xu, Y.K. and Nusse, Curr. Biol. 8 R405-R406 (1998); Masiakowski, P. and Yanopoulos, G.D., Curr. Biol. 8, R407 (1998)].


Pssm-ID: 214498  Cd Length: 113  Bit Score: 158.24  E-value: 1.11e-48
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1974316043   54 IPADLQLCHNVGYKRMRLPNLLEHDSMPEIKQQANSWVPLLAKRCHSDTQIFLCSLFTPVCLDQ--PIYPCRSLCEVVRD 131
Cdd:smart00063   2 EPITIPLCKDLGYNLTSMPNLLGHTTQEEAGLELEQFHPLLNVQCSPDLRFFLCSVYAPICTEDlrPILPCRSLCEAARE 81
                           90       100       110
                   ....*....|....*....|....*....|
gi 1974316043  132 SCAPVMESYGFPWPDMLNCNKFPFDNDLCI 161
Cdd:smart00063  82 GCEPLMEKFGFPWPEFLRCDRFPVQEELCM 111
Fz pfam01392
Fz domain; Also known as the CRD (cysteine rich domain), the C6 box in MuSK receptor. This ...
51-154 1.16e-31

Fz domain; Also known as the CRD (cysteine rich domain), the C6 box in MuSK receptor. This domain of unknown function has been independently identified by several groups. The domain contains 10 conserved cysteines.


Pssm-ID: 460190  Cd Length: 116  Bit Score: 114.59  E-value: 1.16e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1974316043  51 CVDIpaDLQLCHNVGYKRMRLPNLLEHDSMPEIKQQA-----NSWVPLLAKRCHSDTQIFLCSLFTPVC-----LDQPIY 120
Cdd:pfam01392   1 CEPI--TLPMCLGLGYNATVFPNLLGHQTQEEAELSLaylvlSEFEPLVDLSCSPSLRLFLCSLYFPPCtlgpsPKPVCP 78
                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1974316043 121 PCRSLCEVVRDSCAPVME--SYGFPWPDMLNCNKFP 154
Cdd:pfam01392  79 PCRSLCEEVRYGCEPLLEeaKFGFSWPEFLDCDSLP 114
NTR pfam01759
UNC-6/NTR/C345C module; Sequence similarity between netrin UNC-6 and C345C complement protein ...
193-290 3.96e-15

UNC-6/NTR/C345C module; Sequence similarity between netrin UNC-6 and C345C complement protein family members, and hence the existence of the UNC-6 module, was first reported in. Subsequently, many additional members of the family were identified on the basis of sequence similarity between the C-terminal domains of netrins, complement proteins C3, C4, C5, secreted frizzled-related proteins, and type I pro-collagen C-proteinase enhancer proteins (PCOLCEs), which are homologous with the N-terminal domains of tissue inhibitors of metalloproteinases (TIMPs). The TIMPs are classified as a separate family in Pfam (pfam00965). This expanded domain family has been named as the NTR module.


Pssm-ID: 396359  Cd Length: 106  Bit Score: 70.06  E-value: 3.96e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1974316043 193 EQMCS-SDFVVKMHIKEIKKENGerRLVATQKKKKVLKVGpLKRKDTKKLVLYMKNaGTCPCPQLdDLSGSFLVMGRKV- 270
Cdd:pfam01759   1 KKACKgSDYVYKVKVLSVEEEGS--FDKYTVKVKEVLKEG-TDKIQRGKVRLFLKR-GDCRCPQL-RLGKEYLIMGKVGd 75
                          90       100       110
                  ....*....|....*....|....*....|
gi 1974316043 271 ---GGRLLV----LAIY---RWEKKNKEMK 290
Cdd:pfam01759  76 legRGRYVLdknsWVEPwptKWECKLRELQ 105
C345C smart00643
Netrin C-terminal Domain;
192-270 2.10e-10

Netrin C-terminal Domain;


Pssm-ID: 214759  Cd Length: 114  Bit Score: 57.38  E-value: 2.10e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1974316043  192 MEQMCSS--DFVVKMHIKEIKKENGERRLvaTQKKKKVLKVGpLKRKDTKKLVLYMKNAG-TCPCPQLDDLSGSFLVMGR 268
Cdd:smart00643   1 LEKACKSdvDYVYKVKVLSVEEEGGFDKY--TVKILEVIKSG-TDELVRGKNKLRVFISRaSCRCPLLLKLGKSYLIMGK 77

                   ..
gi 1974316043  269 KV 270
Cdd:smart00643  78 SG 79
 
Name Accession Description Interval E-value
CRD_SFRP5 cd07444
Cysteine-rich domain of the secreted frizzled-related protein 5 (SFRP5), a regulator of Wnt ...
45-171 4.37e-91

Cysteine-rich domain of the secreted frizzled-related protein 5 (SFRP5), a regulator of Wnt activity; The cysteine-rich domain (CRD) is an essential part of the secreted frizzled-related Protein 5 (SFRP5), which regulates the activity of Wnt proteins, key players in a number of fundamental cellular processes such as embryogenesis and postnatal development. SFRPs antagonize the activation of Wnt signaling by binding to the CRD domains of frizzled (Fz) proteins, thereby preventing Wnt proteins from binding to these receptors. SFRPs are also known to have functions unrelated to Wnt, as enhancers of procollagen cleavage by the TLD proteinases. SFRPs and Fz proteins both contain CRD domains, but SFRPs lack the seven-pass transmembrane domain which is an integral part of Fzs.


Pssm-ID: 143553  Cd Length: 127  Bit Score: 266.81  E-value: 4.37e-91
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1974316043  45 YTKQSQCVDIPADLQLCHNVGYKRMRLPNLLEHDSMPEIKQQANSWVPLLAKRCHSDTQIFLCSLFTPVCLDQPIYPCRS 124
Cdd:cd07444     1 YSKQPQCVDIPADLPLCHNVGYKRMRLPNLLEHESMAEVKQQASSWVPLLAKRCHADTQVFLCSLFAPVCLDRPIYPCRS 80
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 1974316043 125 LCEVVRDSCAPVMESYGFPWPDMLNCNKFPFDNDLCITVQFGNNQVT 171
Cdd:cd07444    81 LCEAVRDSCAPVMESYGFPWPEMLHCHKFPLDNDLCIAVQFGHLQAT 127
CRD_SFRP1 cd07443
Cysteine-rich domain of the secreted frizzled-related protein 1 (SFRP1), a regulator of Wnt ...
45-167 1.18e-65

Cysteine-rich domain of the secreted frizzled-related protein 1 (SFRP1), a regulator of Wnt activity; The cysteine-rich domain (CRD) is an essential part of the secreted frizzled-related protein 1 (SFRP1), which regulates the activity of Wnt proteins, key players in a number of fundamental cellular processes such as embryogenesis and postnatal development. SFRPs antagonize the activation of Wnt signaling by binding to the CRDs domains of frizzled (Fz) proteins, thereby preventing Wnt proteins from binding to these receptors. SFRPs are also known to have functions unrelated to Wnt, as enhancers of procollagen cleavage by the TLD proteinases. SFRPs and Fz proteins both contain CRD domains, but SFRPs lack the seven-pass transmembrane domain which is an integral part of Fzs. SFRP1 is expressed in many tissues and is involved in the regulation of Wnt signaling in osteoblasts, leading to enhanced trabecular bone formation in adults; it has also been shown to control the growth of retinal ganglion cell axons and the elongation of the antero-posterior axis.


Pssm-ID: 143552  Cd Length: 124  Bit Score: 202.05  E-value: 1.18e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1974316043  45 YTKQSQCVDIPADLQLCHNVGYKRMRLPNLLEHDSMPEIKQQANSWVPLLAKRCHSDTQIFLCSLFTPVCLDQPIYPCRS 124
Cdd:cd07443     1 YTKPPQCVDIPADLRLCHNVGYKKMVLPNLLDHETMAEVKQQASSWVPLLNKNCHKGTQVFLCSLFAPVCLDRPVYPCRW 80
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 1974316043 125 LCEVVRDSCAPVMESYGFPWPDMLNCNKFPFDnDLCITVQFGN 167
Cdd:cd07443    81 LCEAVRDSCEPVMQFFGFYWPEMLKCDKFPEG-EVCIAMTPPN 122
CRD_crescent cd07453
Cysteine-rich domain of the crescent protein; The cysteine-rich domain (CRD) is an essential ...
49-185 8.93e-62

Cysteine-rich domain of the crescent protein; The cysteine-rich domain (CRD) is an essential part of the crescent protein, a member of the secreted frizzled-related protein (SFRP) family, which regulates convergent extension movements (CEMs) during gastrulation and neurulation. Xenopus laevis crescent efficiently forms inhibitory complexes with Wnt5a and Wnt11, but this effect is cancelled in the presence of another member of the SFRP family, Frzb1. A potential role for Crescent in head formation is to regulate a non-canonical Wnt pathway positively in the adjacent posterior mesoderm, and negatively in the overlying anterior neuroectoderm.


Pssm-ID: 143562 [Multi-domain]  Cd Length: 135  Bit Score: 192.85  E-value: 8.93e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1974316043  49 SQCVDIPADLQLCHNVGYKRMRLPNLLEHDSMPEIKQQANSWVPLLAKRCHSDTQIFLCSLFTPVCLDQPIYPCRSLCEV 128
Cdd:cd07453     1 SPCMRIPKSMALCYDIGYSEMRIPNLLEHETMAEVIQQSSSWLPLLARECHPDARIFLCSLFAPICWDRPIYPCRSLCEA 80
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1974316043 129 VRDSCAPVMESYGFPWPDMLNCNKFPFDNDLCITVQFgnNQVTQPPVSRICTQCEIE 185
Cdd:cd07453    81 VRSSCAPLMACYGYPWPEILHCDKFPVDHDLCISPQF--IDTLSPERVKPRASCEDC 135
CRD_SFRP2 cd07446
Cysteine-rich domain of the secreted frizzled-related protein 2 (SFRP2), a regulator of Wnt ...
47-161 2.56e-61

Cysteine-rich domain of the secreted frizzled-related protein 2 (SFRP2), a regulator of Wnt activity; The cysteine-rich-domain (CRD) is an essential part of the secreted frizzled related protein 2 (SFRP2), which regulates the activity of Wnt proteins, key players in a number of fundamental cellular processes such as embryogenesis and postnatal development. SFRPs antagonize the activation of Wnt signaling by binding to CRD domains of frizzled (Fz) proteins, thereby preventing Wnt proteins from binding to these receptors. SFRPs and Fz proteins both contain CRD domains, but SFRPs lack the seven-pass transmembrane domain which is an integral part of Fzs. As a Wnt antagonist, SFRP2 regulates Nkx2.2 expression in the ventral spinal cord and anteroposterior axis elongation. SFRP2 also has a Wnt-independent function as an enhancer of procollagen cleavage by the TLD proteinases. SFRP2 binds both procollagen and TLD, thus facilitating the enzymatic reaction by bringing together the proteinase and its substrate.


Pssm-ID: 143555  Cd Length: 128  Bit Score: 191.28  E-value: 2.56e-61
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1974316043  47 KQSQCVDIPADLQLCHNVGYKRMRLPNLLEHDSMPEIKQQANSWVPLLAKRCHSDTQIFLCSLFTPVC---LDQPIYPCR 123
Cdd:cd07446     1 KKSNCKPIPANMLLCHGIEYTNMRLPNLLGHETMKEVLQQAGSWIPLVQKQCHPDTKKFLCSLFAPVClddLDEAIQPCR 80
                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1974316043 124 SLCEVVRDSCAPVMESYGFPWPDMLNCNKFPFDNDLCI 161
Cdd:cd07446    81 SLCEAVKDGCAPVMSAFGFPWPDMLDCTRFPLDNDLCI 118
NTR_Sfrp1_like cd03580
NTR domain, Secreted frizzled-related protein (Sfrp) 1-like subfamily; composed of proteins ...
176-301 2.36e-56

NTR domain, Secreted frizzled-related protein (Sfrp) 1-like subfamily; composed of proteins similar to human Sfrp1, Sfrp2 and Sfrp5. Sfrps are soluble proteins containing an NTR domain C-terminal to a cysteine-rich Frizzled domain. They show diverse functions and are thought to work in Wnt signaling indirectly, as modulators or antagonists by binding Wnt ligands, and directly, via the Wnt receptor, Frizzled. They participate in regulating the patterning along the anteroposterior axis in vertebrates. Human Sfrp1 has been found frequently to be downregulated in breast cancer and is associated with disease progression and poor prognosis.


Pssm-ID: 239635  Cd Length: 126  Bit Score: 178.26  E-value: 2.36e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1974316043 176 SRICTQCEIEHK-ADGIMEQMCSSDFVVKMHIKEIKKENGERRLVAtQKKKKVLKVGPLKRKDTKKLVLYMKNAGTCPCP 254
Cdd:cd03580     1 PKVCPPCENEEEsAKTLLDNFCASDFALKVKIKEISYENGDRKVIG-EKKKEILKQGPLKKKDLKKLVLWLKNGANCPCP 79
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 1974316043 255 QLDDLSGSFLVMGRKVGGRLLVLAIYRWEKKNKEMKFAVKFMFSYPC 301
Cdd:cd03580    80 QLDNLNGVYLVMGRKVDGKLLLTSIYKWQKKNKEFKRAVRKWKKHKC 126
FRI smart00063
Frizzled; Drosophila melanogaster frizzled mediates signalling that polarises a precursor cell ...
54-161 1.11e-48

Frizzled; Drosophila melanogaster frizzled mediates signalling that polarises a precursor cell along the anteroposterior axis. Homologues of the N-terminal region of frizzled exist either as transmembrane or secreted molecules. Frizzled homologues are reported to be receptors for the Wnt growth factors. (Not yet in MEDLINE: the FRI domain occurs in several receptor tyrosine kinases [Xu, Y.K. and Nusse, Curr. Biol. 8 R405-R406 (1998); Masiakowski, P. and Yanopoulos, G.D., Curr. Biol. 8, R407 (1998)].


Pssm-ID: 214498  Cd Length: 113  Bit Score: 158.24  E-value: 1.11e-48
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1974316043   54 IPADLQLCHNVGYKRMRLPNLLEHDSMPEIKQQANSWVPLLAKRCHSDTQIFLCSLFTPVCLDQ--PIYPCRSLCEVVRD 131
Cdd:smart00063   2 EPITIPLCKDLGYNLTSMPNLLGHTTQEEAGLELEQFHPLLNVQCSPDLRFFLCSVYAPICTEDlrPILPCRSLCEAARE 81
                           90       100       110
                   ....*....|....*....|....*....|
gi 1974316043  132 SCAPVMESYGFPWPDMLNCNKFPFDNDLCI 161
Cdd:smart00063  82 GCEPLMEKFGFPWPEFLRCDRFPVQEELCM 111
CRD_sizzled cd07452
Cysteine-rich domain of the sizzled protein; The cysteine-rich domain (CRD) is an essential ...
49-162 6.77e-41

Cysteine-rich domain of the sizzled protein; The cysteine-rich domain (CRD) is an essential part of the sizzled protein, which regulates bone morphogenetic protein (Bmp) signaling by stabilizing chordin, and plays a critical role in the patterning of vertebrate and invertebrate embryos. Sizzled also functions in the ventral region as a Wnt inhibitor and modulates canonical Wnt signaling. Sizzled proteins belong to the secreted frizzled-related protein family (SFRP), and have be identified in the genomes of birds, fishes and frogs, but not mammals.


Pssm-ID: 143561  Cd Length: 141  Bit Score: 139.25  E-value: 6.77e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1974316043  49 SQCVDIPADLQLCHNVGYKRMRLPNLLEHDSMPEIKQQANSWVPLLAKRCHSDTQIFLCSLFTPVCLDQPIYPCRSLCEV 128
Cdd:cd07452     7 TKCVPIPPEMSMCQDVGYSEMRLPNLLGHTSMAEVVPKSADWQTLLHTGCHPHARTFLCSLFAPVCLDTFIQPCRSMCVA 86
                          90       100       110
                  ....*....|....*....|....*....|....
gi 1974316043 129 VRDSCAPVMESYGFPWPDMLNCNKFPFDNDLCIT 162
Cdd:cd07452    87 VRDSCAPVLACHGHSWPESLDCDRFPAGEDMCLA 120
CRD_FZ cd07066
CRD_domain cysteine-rich domain, also known as Fz (frizzled) domain; CRD_FZ is an essential ...
50-164 5.90e-40

CRD_domain cysteine-rich domain, also known as Fz (frizzled) domain; CRD_FZ is an essential component of a number of cell surface receptors, which are involved in multiple signal transduction pathways, particularly in modulating the activity of the Wnt proteins, which play a fundamental role in the early development of metazoans. CRD is also found in secreted frizzled related proteins (SFRPs), which lack the transmembrane segment found in the frizzled protein. The CRD domain is also present in the alpha-1 chain of mouse type XVIII collagen, in carboxypeptidase Z, several receptor tyrosine kinases, and the mosaic transmembrane serine protease corin. The CRD domain is well conserved in metazoans - 10 frizzled proteins have been identified in mammals, 4 in Drosophila and 3 in Caenorhabditis elegans. CRD domains have also been identified in multiple tandem copies in a Dictyostelium discoideum protein. Very little is known about the mechanism by which CRD domains interact with their ligands. The domain contains 10 conserved cysteines.


Pssm-ID: 143549  Cd Length: 119  Bit Score: 136.10  E-value: 5.90e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1974316043  50 QCVDIPadLQLCHNVGYKRMRLPNLLEHDSMPEIKQQANSWVPLLAKRCHSDTQIFLCSLFTPVCLDQ---PIYPCRSLC 126
Cdd:cd07066     1 KCEPIP--LPLCRGLPYNTTRFPNLLGHESQEEAEQELESFTPLVNSGCHPDLRFFLCSLYFPECTPDgdrPIPPCRSLC 78
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 1974316043 127 EVVRDSCAPVMESYGFPWPDMLNCNKFPFDN--DLCITVQ 164
Cdd:cd07066    79 EEVRDSCEPLMLAFGFPWPEPLDCDRFPDSNeeGLCISPP 118
CRD_FZ4 cd07448
Cysteine-rich Wnt-binding domain of the frizzled 4 (Fz4) receptor; The cysteine-rich domain ...
55-158 3.09e-35

Cysteine-rich Wnt-binding domain of the frizzled 4 (Fz4) receptor; The cysteine-rich domain (CRD) is an essential extracellular portion of the frizzled 4 (Fz4) receptor, and is required for binding Wnt proteins, which play fundamental roles in many aspects of early development, such as cell and tissue polarity, neural synapse formation, and the regulation of proliferation. Fz proteins serve as Wnt receptors for multiple signal transduction pathways, including both beta-catenin dependent and -independent cellular signaling, as well as the planar cell polarity pathway and the Ca(2+) modulating signaling pathway. CRD containing Fzs have been found in diverse species from amoebas to mammals. 10 different frizzled proteins are found in vertebrata. Frizzled 4 (Fz4) activates the Ca(2+)/calmodulin-dependent protein kinase II and protein kinase C of the Wnt/Ca(2+) signaling pathway during retinal angiogenesis. Mutations in Fz4 lead to familial exudative vitreoretinopathy (FEVR), a hereditary ocular disorder characterized by failure of the peripheral retinal vascularization. In addition, the interplay between Fz4 and norrin as a receptor-ligand pair plays an important role in vascular development in the retina and inner ear in a Wnt-independent manner.


Pssm-ID: 143557  Cd Length: 126  Bit Score: 124.11  E-value: 3.09e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1974316043  55 PADLQLCHNVGYKRMRLPNLLEHDSMPEIKQQANSWVPLLAKRCHSDTQIFLCSLFTPVC---LDQPIYPCRSLCEVVRD 131
Cdd:cd07448     6 PIRIEMCQGLGYNVTRMPNLVGHELQTDAELQLQTFTPLIQYGCSSQLKFFLCSVYVPMCtekVPVPIGPCRPLCLSVKK 85
                          90       100
                  ....*....|....*....|....*..
gi 1974316043 132 SCAPVMESYGFPWPDMLNCNKFPFDND 158
Cdd:cd07448    86 RCLPVLKEFGFPWPEALNCSKFPPQNN 112
CRD_FZ9 cd07463
Cysteine-rich Wnt-binding domain (CRD) of the frizzled 9 (Fz9) receptor; The cysteine-rich ...
55-161 1.45e-32

Cysteine-rich Wnt-binding domain (CRD) of the frizzled 9 (Fz9) receptor; The cysteine-rich domain (CRD) is an essential extracellular portion of the frizzled 9 (Fz9) receptor, and is required for binding Wnt proteins, which play fundamental roles in many aspects of early development, such as cell and tissue polarity, neural synapse formation, and the regulation of proliferation. Fz proteins serve as Wnt receptors for multiple signal transduction pathways, including both beta-catenin dependent and -independent cellular signaling, as well as the planar cell polarity pathway and Ca(2+) modulating signaling pathway. CRD containing Fzs have been found in diverse species from amoebas to mammals. 10 different frizzled proteins are found in vertebrata. Fz9 may play a signaling role in lymphoid development and maturation, particularly at points where B cells undergo self-renewal prior to further differentiation.


Pssm-ID: 143572  Cd Length: 127  Bit Score: 117.05  E-value: 1.45e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1974316043  55 PADLQLCHNVGYKRMRLPNLLEHDSMPEIKQQANSWVPLLAKRCHSDTQIFLCSLFTPVCLDQ---PIYPCRSLCEVVRD 131
Cdd:cd07463     7 PVVIPMCRGIGYNLTRMPNFLGHDSQREAAIKLNEFAPLVEYGCHVHLRFFLCSLYAPMCTDQvstSIPACRPMCEQARQ 86
                          90       100       110
                  ....*....|....*....|....*....|...
gi 1974316043 132 SCAPVMESYGFPWPDMLNCNKFPFDND---LCI 161
Cdd:cd07463    87 KCSPIMEQFNFGWPESLDCSRLPTRNDpnaLCM 119
CRD_FZ9_like cd07457
Cysteine-rich Wnt-binding domain (CRD) of receptors similar to frizzled 9; The cysteine-rich ...
55-161 6.71e-32

Cysteine-rich Wnt-binding domain (CRD) of receptors similar to frizzled 9; The cysteine-rich domain (CRD) is an essential extracellular portion of the frizzled 9 (Fz9) and frizzled 10 (Fz10) receptors, and similar proteins. This domain is required for binding Wnt proteins, which play fundamental roles in many aspects of early development, such as cell and tissue polarity, neural synapse formation, and the regulation of proliferation. Fz proteins serve as Wnt receptors for multiple signal transduction pathways, including both beta-catenin dependent and -independent cellular signaling, as well as the planar cell polarity pathway and Ca(2+) modulating signaling pathway. The CRD domain is well conserved in metazoans - 10 frizzled proteins have been identified in mammals, 4 in Drosophila and 3 in Caenorhabditis elegans. Very little is known about the mechanism by which CRD domains interact with their ligands. The domain contains 10 conserved cysteines.


Pssm-ID: 143566  Cd Length: 121  Bit Score: 115.28  E-value: 6.71e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1974316043  55 PADLQLCHNVGYKRMRLPNLLEHDSMPEIKQQANSWVPLLAKRCHSDTQIFLCSLFTPVCLDQ---PIYPCRSLCEVVRD 131
Cdd:cd07457     5 RITIPMCQGIGYNMTRMPNLLGHESQSEAAISIHEFAPLVQYGCAEHLRFFLCSLYAPMCTEQvsiPIPACRSMCEQARD 84
                          90       100       110
                  ....*....|....*....|....*....|...
gi 1974316043 132 SCAPVMESYGFPWPDMLNCNKFPFDND---LCI 161
Cdd:cd07457    85 KCSPIMEQFSFSWPDSLDCDRLPRKNDpkdLCM 117
Fz pfam01392
Fz domain; Also known as the CRD (cysteine rich domain), the C6 box in MuSK receptor. This ...
51-154 1.16e-31

Fz domain; Also known as the CRD (cysteine rich domain), the C6 box in MuSK receptor. This domain of unknown function has been independently identified by several groups. The domain contains 10 conserved cysteines.


Pssm-ID: 460190  Cd Length: 116  Bit Score: 114.59  E-value: 1.16e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1974316043  51 CVDIpaDLQLCHNVGYKRMRLPNLLEHDSMPEIKQQA-----NSWVPLLAKRCHSDTQIFLCSLFTPVC-----LDQPIY 120
Cdd:pfam01392   1 CEPI--TLPMCLGLGYNATVFPNLLGHQTQEEAELSLaylvlSEFEPLVDLSCSPSLRLFLCSLYFPPCtlgpsPKPVCP 78
                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1974316043 121 PCRSLCEVVRDSCAPVME--SYGFPWPDMLNCNKFP 154
Cdd:pfam01392  79 PCRSLCEEVRYGCEPLLEeaKFGFSWPEFLDCDSLP 114
CRD_FZ8 cd07461
Cysteine-rich Wnt-binding domain (CRD) of the frizzled 8 (Fz8) receptor; The cysteine-rich ...
47-154 7.24e-31

Cysteine-rich Wnt-binding domain (CRD) of the frizzled 8 (Fz8) receptor; The cysteine-rich domain (CRD) is an essential extracellular portion of the frizzled 8 (Fz8) receptor, and is required for binding Wnt proteins, which play fundamental roles in many aspects of early development, such as cell and tissue polarity, neural synapse formation, and the regulation of proliferation. Fz proteins serve as Wnt receptors for multiple signal transduction pathways, including both beta-catenin dependent and -independent cellular signaling, as well as the planar cell polarity pathway and Ca(2+) modulating signaling pathway. CRD containing Fzs have been found in diverse species from amoebas to mammals. 10 different frizzled proteins are found in vertebrata. Xenopus Fz8 is important in Wnt/beta-catenin signaling pathways controlling the transcriptional activation of target genes Siamois and Xnr3 in the animal caps of late blastula.


Pssm-ID: 143570  Cd Length: 125  Bit Score: 112.77  E-value: 7.24e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1974316043  47 KQSQCVDIPadLQLCHNVGYKRMRLPNLLEHDSMPEIKQQANSWVPLLAKRCHSDTQIFLCSLFTPVCLD---QPIYPCR 123
Cdd:cd07461     1 KELQCQEIT--VPLCKGIGYNYTYMPNQFNHDTQDEAGLEVHQFWPLVEIQCSPDLKFFLCSMYTPICLEdykKPLPPCR 78
                          90       100       110
                  ....*....|....*....|....*....|.
gi 1974316043 124 SLCEVVRDSCAPVMESYGFPWPDMLNCNKFP 154
Cdd:cd07461    79 SVCERAKAGCAPLMRQYGFPWPDRMRCDLLP 109
CRD_FZ1_like cd07458
Cysteine-rich Wnt-binding domain (CRD) of receptors similar to frizzled 1; The cysteine-rich ...
55-161 6.54e-30

Cysteine-rich Wnt-binding domain (CRD) of receptors similar to frizzled 1; The cysteine-rich domain (CRD) is an essential extracellular portion of the frizzled 1 (Fz1), frizzled 2 (Fz2), and frizzled 7 (Fz7) receptors, and similar proteins. This domain is required for binding Wnt proteins, which play fundamental roles in many aspects of early development, such as cell and tissue polarity, neural synapse formation, and the regulation of proliferation. Fz proteins serve as Wnt receptors for multiple signal transduction pathways, including both beta-catenin dependent and -independent cellular signaling, as well as the planar cell polarity pathway and Ca(2+) modulating signaling pathway. The CRD domain is well conserved in metazoans - 10 frizzled proteins have been identified in mammals, 4 in Drosophila and 3 in Caenorhabditis elegans. Very little is known about the mechanism by which CRD domains interact with their ligands. The domain contains 10 conserved cysteines.


Pssm-ID: 143567  Cd Length: 119  Bit Score: 109.81  E-value: 6.54e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1974316043  55 PADLQLCHNVGYKRMRLPNLLEHDSMPEIKQQANSWVPLLAKRCHSDTQIFLCSLFTPVC--LDQPIYPCRSLCEVVRDS 132
Cdd:cd07458     5 PITIPLCTDIPYNMTIFPNLLGHTKQEDAGLEVHQFYPLVKVQCSPDLKFFLCSVYAPVCtvLERPIPPCRSLCESARQG 84
                          90       100       110
                  ....*....|....*....|....*....|.
gi 1974316043 133 CAPVMESYGFPWPDMLNCNKFPFDN--DLCI 161
Cdd:cd07458    85 CEALMNKFGFQWPESLDCEKFPVHGagDLCV 115
CRD_FZ5_like cd07456
Cysteine-rich Wnt-binding domain (CRD) of receptors similar to frizzled 5; The cysteine-rich ...
60-161 6.58e-30

Cysteine-rich Wnt-binding domain (CRD) of receptors similar to frizzled 5; The cysteine-rich domain (CRD) is an essential extracellular portion of the frizzled 5 (Fz5) and frizzled 8 (Fz8) receptors, and similar proteins. This domain is required for binding Wnt proteins, which play fundamental roles in many aspects of early development, such as cell and tissue polarity, neural synapse formation, and the regulation of proliferation. Fz proteins serve as Wnt receptors for multiple signal transduction pathways, including both beta-catenin dependent and -independent cellular signaling, as well as the planar cell polarity pathway and Ca(2+) modulating signaling pathway. The CRD domain is well conserved in metazoans - 10 frizzled proteins have been identified in mammals, 4 in Drosophila and 3 in Caenorhabditis elegans. Very little is known about the mechanism by which CRD domains interact with their ligands. The domain contains 10 conserved cysteines.


Pssm-ID: 143565  Cd Length: 120  Bit Score: 109.80  E-value: 6.58e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1974316043  60 LCHNVGYKRMRLPNLLEHDSMPEIKQQANSWVPLLAKRCHSDTQIFLCSLFTPVCL---DQPIYPCRSLCEVVRDSCAPV 136
Cdd:cd07456     9 MCKGIGYNMTYMPNQFNHDTQEEAGLEVHQFWPLVEIQCSPDLKFFLCSMYTPICLedyDKPLPPCRSVCERARDGCAPI 88
                          90       100
                  ....*....|....*....|....*...
gi 1974316043 137 MESYGFPWPDMLNCNKFP---FDNDLCI 161
Cdd:cd07456    89 MRQYGFAWPERMSCDALPeggDPDNLCM 116
CRD_FZ10 cd07462
Cysteine-rich Wnt-binding domain (CRD) of the frizzled 10 (Fz10) receptor; The cysteine-rich ...
50-161 3.87e-29

Cysteine-rich Wnt-binding domain (CRD) of the frizzled 10 (Fz10) receptor; The cysteine-rich domain (CRD) is an essential extracellular portion of the frizzled 10 (Fz10) receptor, and is required for binding Wnt proteins, which play fundamental roles in many aspects of early development, such as cell and tissue polarity, neural synapse formation, and the regulation of proliferation. Fz proteins serve as Wnt receptors for multiple signal transduction pathways, including both beta-catenin dependent and -independent cellular signaling, as well as the planar cell polarity pathway and Ca(2+) modulating signaling pathway. CRD containing Fzs have been found in diverse species from amoebas to mammals. 10 different frizzled proteins are found in vertebrata. The cellular functon of Fz10 is unknown.


Pssm-ID: 143571  Cd Length: 127  Bit Score: 108.18  E-value: 3.87e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1974316043  50 QCVDIPadlqLCHNVGYKRMRLPNLLEHDSMPEIKQQANSWVPLLAKRCHSDTQIFLCSLFTPVCLDQ---PIYPCRSLC 126
Cdd:cd07462     6 QPIEIP----MCKDIGYNMTRMPNLMGHENQREAAIQLHEFAPLVEYGCHSHLKFFLCSLYAPMCTEQvstPIPACRVMC 81
                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1974316043 127 EVVRDSCAPVMESYGFPWPDMLNCNKFPFDND---LCI 161
Cdd:cd07462    82 EQARLKCSPIMEQFNFKWPDSLDCSKLPNKNDpnyLCM 119
CRD_FZ5 cd07460
Cysteine-rich Wnt-binding domain (CRD) of the frizzled 5 (Fz5) receptor.proteins; The ...
60-161 8.80e-28

Cysteine-rich Wnt-binding domain (CRD) of the frizzled 5 (Fz5) receptor.proteins; The cysteine-rich domain (CRD) is an essential extracellular portion of the frizzled 5 (Fz5) receptor, and is required for binding Wnt proteins, which play fundamental roles in many aspects of early development, such as cell and tissue polarity, neural synapse formation, and the regulation of proliferation. Fz proteins serve as Wnt receptors for multiple signal transduction pathways, including both beta-catenin dependent and -independent cellular signaling, as well as the planar cell polarity pathway and Ca(2+) modulating signaling pathway. CRD containing Fzs have been found in diverse species from amoebas to mammals. 10 different frizzled proteins are found in vertebrata. Fz5 plays critical regulating roles in the yolk sac and placental angiogenesis, in the maturation of the Paneth cell phenotype, in governing the neural potential of progenitors in the developing retina, and in neuronal survival in the parafascicular nucleus.


Pssm-ID: 143569 [Multi-domain]  Cd Length: 127  Bit Score: 104.71  E-value: 8.80e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1974316043  60 LCHNVGYKRMRLPNLLEHDSMPEIKQQANSWVPLLAKRCHSDTQIFLCSLFTPVCLD---QPIYPCRSLCEVVRDSCAPV 136
Cdd:cd07460    12 MCKGIGYNLTYMPNQFNHDTQDEAGLEVHQFWPLVEIQCSPDLRFFLCSMYTPICLPdyrKPLPPCRSVCERAKAGCSPL 91
                          90       100
                  ....*....|....*....|....*...
gi 1974316043 137 MESYGFPWPDMLNCNKFPFDND---LCI 161
Cdd:cd07460    92 MRQYGFAWPERMNCDRLPVLGDpetLCM 119
CRD_FZ1 cd07465
Cysteine-rich Wnt-binding domain (CRD) of the frizzled 1 (Fz1) receptor; The cysteine-rich ...
55-161 4.43e-24

Cysteine-rich Wnt-binding domain (CRD) of the frizzled 1 (Fz1) receptor; The cysteine-rich domain (CRD) is an essential extracellular portion of the frizzled 1 (Fz1) receptor, and is required for binding Wnt proteins, which play fundamental roles in many aspects of early development, such as cell and tissue polarity, neural synapse formation, and the regulation of proliferation. Fz proteins serve as Wnt receptors for multiple signal transduction pathways, including both beta-catenin dependent and -independent cellular signaling, as well as the planar cell polarity pathway and Ca(2+) modulating signaling pathway. CRD containing Fzs have been found in diverse species from amoebas to mammals. 10 different frizzled proteins are found in vertebrata.


Pssm-ID: 143574  Cd Length: 127  Bit Score: 94.74  E-value: 4.43e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1974316043  55 PADLQLCHNVGYKRMRLPNLLEHDSMPEIKQQANSWVPLLAKRCHSDTQIFLCSLFTPVC--LDQPIYPCRSLCEVVRDS 132
Cdd:cd07465     7 PISIPLCTDIAYNQTIMPNLLGHTNQEDAGLEVHQFYPLVKVQCSAELKFFLCSMYAPVCtvLEQALPPCRSLCERARQG 86
                          90       100       110
                  ....*....|....*....|....*....|.
gi 1974316043 133 CAPVMESYGFPWPDMLNCNKFPFD--NDLCI 161
Cdd:cd07465    87 CEALMNKFGFQWPDTLRCEKFPVHgaGELCV 117
CRD_FZ7 cd07466
Cysteine-rich Wnt-binding domain (CRD) of the frizzled 7 (Fz7) receptor; The cysteine-rich ...
55-154 9.54e-24

Cysteine-rich Wnt-binding domain (CRD) of the frizzled 7 (Fz7) receptor; The cysteine-rich domain (CRD) is an essential extracellular portion of the frizzled 7 (Fz7) receptor, and is required for binding Wnt proteins, which play fundamental roles in many aspects of early development, such as cell and tissue polarity, neural synapse formation, and the regulation of proliferation. Fz proteins serve as Wnt receptors for multiple signal transduction pathways, including both beta-catenin dependent and -independent cellular signaling, as well as the planar cell polarity pathway and Ca(2+) modulating signaling pathway. CRD containing Fzs have been found in diverse species from amoebas to mammals. 10 different frizzled proteins are found in vertebrata. Xenopus Fz7 is important in Wnt/beta-catenin signaling pathways controlling the transcriptional activation of target genes Siamois and Xnr3 in the animal caps of late blastula.


Pssm-ID: 143575 [Multi-domain]  Cd Length: 125  Bit Score: 94.00  E-value: 9.54e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1974316043  55 PADLQLCHNVGYKRMRLPNLLEHDSMPEIKQQANSWVPLLAKRCHSDTQIFLCSLFTPVC--LDQPIYPCRSLCEVVRDS 132
Cdd:cd07466     7 PISIPLCTDIAYNQTIMPNLLGHTNQEDAGLEVHQFYPLVKVQCSPELKFFLCSMYAPVCtvLEQAIPPCRSLCERARQG 86
                          90       100
                  ....*....|....*....|..
gi 1974316043 133 CAPVMESYGFPWPDMLNCNKFP 154
Cdd:cd07466    87 CEALMNKFGFQWPERLRCENFP 108
CRD_FZ2 cd07464
Cysteine-rich Wnt-binding domain (CRD) of the frizzled 2 (Fz2) receptor; The cysteine-rich ...
55-154 2.71e-23

Cysteine-rich Wnt-binding domain (CRD) of the frizzled 2 (Fz2) receptor; The cysteine-rich domain (CRD) is an essential extracellular portion of the frizzled 2 (Fz2) receptor, and is required for binding Wnt proteins, which play fundamental roles in many aspects of early development, such as cell and tissue polarity, neural synapse formation, and the regulation of proliferation. Fz proteins serve as Wnt receptors for multiple signal transduction pathways, including both beta-catenin dependent and -independent cellular signaling, as well as the planar cell polarity pathway and Ca(2+) modulating signaling pathway. CRD containing Fzs have been found in diverse species from amoebas to mammals. 10 different frizzled proteins are found in vertebrata. Fz2 is involved in the Wnt/beta-catenin signaling pathway and in the activation of protein kinase C and calcium/calmodulin-dependent protein kinase (CaM kinase).


Pssm-ID: 143573  Cd Length: 127  Bit Score: 92.84  E-value: 2.71e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1974316043  55 PADLQLCHNVGYKRMRLPNLLEHDSMPEIKQQANSWVPLLAKRCHSDTQIFLCSLFTPVC--LDQPIYPCRSLCEVVRDS 132
Cdd:cd07464     7 PISIPLCTDIAYNQTIMPNLLGHTNQEDAGLEVHQFYPLVKVQCSLELRFFLCSMYAPVCtvLEQAIPPCRSICERARQG 86
                          90       100
                  ....*....|....*....|..
gi 1974316043 133 CAPVMESYGFPWPDMLNCNKFP 154
Cdd:cd07464    87 CEALMNKFGFQWPERLRCENFP 108
CRD_LIN_17 cd07454
Cysteine-rich domain (CRD) of LIN_17; A cysteine-rich domain (CRD) is an essential component ...
54-161 1.16e-21

Cysteine-rich domain (CRD) of LIN_17; A cysteine-rich domain (CRD) is an essential component of a number of cell surface receptors, which are involved in multiple signal transduction pathways, particularly in modulating the activity of the Wnt proteins, which play a fundamental role in the early development of metazoans. CRD is also found in secreted frizzled related proteins (SFRPs), which lack the transmembrane segment found in the frizzled protein. The CRD domain is also present in the alpha-1 chain of mouse type XVIII collagen, in carboxypeptidase Z, several receptor tyrosine kinases, and the mosaic transmembrane serine protease corin. The CRD domain is well conserved in metazoans - 10 frizzled proteins have been identified in mammals, 4 in Drosophila and 3 in Caenorhabditis elegans. CRD domains have also been identified in multiple tandem copies in a Dictyostelium discoideum protein. Very little is known about the mechanism by which CRD domains interact with their ligands. The domain contains 10 conserved cysteines. The protein lin-17 is involved in cell type specification during Caenorhabditis elegans vulval development.


Pssm-ID: 143563  Cd Length: 124  Bit Score: 88.30  E-value: 1.16e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1974316043  54 IPADLQLCHNVGYKRMRLPNLLEHDSMPEIKQQANSWVPLLAKRCHSDTQIFLCSLFTPVCLDQ---PIYPCRSLCEVVR 130
Cdd:cd07454     6 IPIDIELCKDLPYNYTYFPNTILHNDQHTLQTHTEHFKPLMKTKCHPHIHFFICSVFAPMCPIGmpqAVTSCKSVCEQVK 85
                          90       100       110
                  ....*....|....*....|....*....|.
gi 1974316043 131 DSCAPVMESYGFPWPDMLNCNKFPFDNDLCI 161
Cdd:cd07454    86 ADCFSILEEFGIGWPEPLNCAQFPDPPELCM 116
CRD_FZ3 cd07449
Cysteine-rich Wnt-binding domain (CRD) of the frizzled 3 (Fz3) receptor; The cysteine-rich ...
55-154 9.16e-21

Cysteine-rich Wnt-binding domain (CRD) of the frizzled 3 (Fz3) receptor; The cysteine-rich domain (CRD) is an essential extracellular portion of the frizzled 3 (Fz3) receptor, and is required for binding Wnt proteins, which play fundamental roles in many aspects of early development, such as cell and tissue polarity, neural synapse formation, and the regulation of proliferation. Fz proteins serve as Wnt receptors for multiple signal transduction pathways, including both beta-catenin dependent and -independent cellular signaling, as well as the planar cell polarity pathway and Ca(2+) modulating signaling pathway. CRD containing Fzs have been found in diverse species from amoebas to mammals. 10 different frizzled proteins are found in vertebrata. Fz3 plays a vital role in the anterior-posterior guidance of commissural axons. Knockout mice without Fz3 show defects in fiber tracts in the rostral CNS.


Pssm-ID: 143558 [Multi-domain]  Cd Length: 127  Bit Score: 86.22  E-value: 9.16e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1974316043  55 PADLQLCHNVGYKRMRLPNLLEHDSMPEIKQQANSWVPLLAKRCHSDTQIFLCSLFTPVCLD--QPIYPCRSLCEVVRDS 132
Cdd:cd07449     7 PITLRMCQDLPYNTTFMPNLLNHYDQQTAALAMEPFHPMVNLECSRDFRPFLCALYAPVCMEygRVTLPCRRLCQRAYSE 86
                          90       100
                  ....*....|....*....|..
gi 1974316043 133 CAPVMESYGFPWPDMLNCNKFP 154
Cdd:cd07449    87 CSKLMEMFGVPWPEDMECSRFP 108
CRD_SFRP4 cd07442
Cysteine-rich domain of the secreted frizzled-related protein 4 (SFRP4), a Wnt antagonist; The ...
50-162 3.80e-20

Cysteine-rich domain of the secreted frizzled-related protein 4 (SFRP4), a Wnt antagonist; The cysteine-rich domain (CRD) is an essential part of the secreted frizzled-related Protein 4 (SFRP4), which regulates the activity of Wnt proteins, key players in a number of fundamental cellular processes such as embryogenesis and postnatal development. SFRPs antagonize the activation of Wnt signaling by binding to the CRDs domains of frizzled (Fz) proteins, thereby preventing Wnt proteins from binding to these receptors. SFRPs are also known to have functions unrelated to Wnt, as enhancers of procollagen cleavage by the TLD proteinases. SFRPs and Fz proteins both contain CRD domains, but SFRPs lack the seven-pass transmembrane domain which is an integral part of Fzs.


Pssm-ID: 143551  Cd Length: 127  Bit Score: 84.31  E-value: 3.80e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1974316043  50 QCVDIPadlqLCHNVGYKRMRLPNLLEHDSMPEIKQQANSWVPLLAKRCHSDTQIFLCSLFTPVC----LDQPIYPCRSL 125
Cdd:cd07442     6 EAVRIP----MCRHMPWNITRMPNHLHHSTQENAVLAIEQYEELVDTGCSPVLPFFLCAMYAPICtlefLYDPIKPCRSV 81
                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1974316043 126 CEVVRDSCAPVMESYGFPWPDMLNCNKFP-FDNDLCIT 162
Cdd:cd07442    82 CQRARDGCEPIMRRYNHSWPESLACDDLPvYDRGVCIS 119
CRD_SFRP3 cd07441
Cysteine-rich domain of the secreted frizzled-related protein 3 (SFRP3, alias FRZB), a Wnt ...
55-162 3.13e-19

Cysteine-rich domain of the secreted frizzled-related protein 3 (SFRP3, alias FRZB), a Wnt antagonist; The cysteine-rich domain (CRD) is an essential part of the secreted frizzled-related protein 3 (SFRP3, alias FRZB), which plays important roles in embryogenesis and postnatal development as an antagonist of Wnt proteins, key players in a number of fundamental cellular processes. SFRPs antagonize the activation of Wnt signaling by binding to the CRD domains of frizzled proteins (Fz), thereby preventing Wnt proteins from binding to these receptors. SFRPs are also known to have functions unrelated to Wnt, as enhancers of procollagen cleavage by the TLD proteinases. SFRPs and Fz proteins both contain CRD domains, but SFRPs lack the seven-pass transmembrane domain which is an integral part of Fzs. SFRP3 regulates Wnt signaling activity in bone development and homeostasis. It is also involved in the control of planar cell polarity.


Pssm-ID: 143550  Cd Length: 126  Bit Score: 82.02  E-value: 3.13e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1974316043  55 PADLQLCHNVGYKRMRLPNLLEHDSMPEIKQQANSWVPLLAKRCHSDTQIFLCSLFTPVCL----DQPIYPCRSLCEVVR 130
Cdd:cd07441     6 PVRIPMCKSMPWNMTKMPNHLHHSTQANAVLAIEQFEGLLGTQCSPDLLFFLCAMYAPICTidfqHEPIKPCKSVCERAR 85
                          90       100       110
                  ....*....|....*....|....*....|...
gi 1974316043 131 DSCAPVMESYGFPWPDMLNCNKFP-FDNDLCIT 162
Cdd:cd07441    86 AGCEPVLIRYRHTWPESLACEELPvYDRGVCIS 118
NTR_like cd03523
NTR_like domain; a beta barrel with an oligosaccharide/oligonucleotide-binding fold found in ...
196-290 4.48e-18

NTR_like domain; a beta barrel with an oligosaccharide/oligonucleotide-binding fold found in netrins, complement proteins, tissue inhibitors of metalloproteases (TIMP), and procollagen C-proteinase enhancers (PCOLCE), amongst others. In netrins, the domain plays a role in controlling axon branching in neural development, while the common function of these modules in TIMPs appears to be binding to metzincins. A subset of this family is also known as the C345C domain because it occurs as a C-terminal domain in complement C3, C4 and C5. In C5, the domain interacts with various partners during the formation of the membrane attack complex.


Pssm-ID: 239600  Cd Length: 105  Bit Score: 77.89  E-value: 4.48e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1974316043 196 CSSDFVVKMHIKEIKKENGERRLVAtqKKKKVLKVGPLKrKDTKKLVLYMKNAGTCPCPQLDDLSGSFLVMGRKVGGR-L 274
Cdd:cd03523     4 CKSDYVVRAKIKEIKEENDDVKYEV--KIIKIYKTGKAK-ADKADLRFYYTAPACCPCHPILNPGREYLIMGKEEDSQgG 80
                          90       100
                  ....*....|....*....|
gi 1974316043 275 LVL----AIYRWEKKNKEMK 290
Cdd:cd03523    81 LVLdplsFVEPWSPLSLRQD 100
CRD_Collagen_XVIII cd07455
Cysteine-rich domain of the variant 3 of collagen XVIII (V3C18 ); The cysteine-rich domain ...
49-158 7.85e-17

Cysteine-rich domain of the variant 3 of collagen XVIII (V3C18 ); The cysteine-rich domain (CRD) is an essential part of the variant 3 of collagen XVIII (V3C18), which regulates major cellular functions such as the differential epithelial morphogenesis of early lung and kidney development. V3C18 is a 170 kD protein, which is proteolotically processed into the CRD-containing 50 kD glucoprotein precursor that binds Wnt3a through its CRD domain and suppresses the Wnt3a-induced stabilization of beta catenin. Full-length V3C18 is unable to inhibit Wnt signaling.


Pssm-ID: 143564  Cd Length: 123  Bit Score: 75.24  E-value: 7.85e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1974316043  49 SQCVDIPADLQLCHNVGYKRMRLPNLLEHDSMPEIKQQANSWVPLLAKRCHSDTQIFLCSLFTPVC---LDQPIYPCRSL 125
Cdd:cd07455     3 PRCLPVPSSLPFCSRLGIRSFWLPNFLNHTSVEEVRAVLAEWAWLLESGCHPSLEWFFCLLLVPSCgggPPPPPPPCRQF 82
                          90       100       110
                  ....*....|....*....|....*....|...
gi 1974316043 126 CEVVRDSCAPVMESYGFPwpdmLNCNKFPFDND 158
Cdd:cd07455    83 CEVLQDSCWNLLEGGRLP----VACASLPEQED 111
CRD_corin_2 cd07888
One of two cysteine-rich domains of the corin protein, a type II transmembrane serine protease ...
55-162 1.32e-16

One of two cysteine-rich domains of the corin protein, a type II transmembrane serine protease ; The cysteine-rich domain (CRD) is an essential component of corin, a type II transmembrane serine protease which functions as the convertase of the pro-atrial natriuretic peptide (pro-ANP) in the heart. Corin contains two CRDs in its extracellular region, which play an important role in recognition of the physiological substrate, pro-ANP. This model characterizes the second (C-terminal) CRD.


Pssm-ID: 143579 [Multi-domain]  Cd Length: 122  Bit Score: 74.67  E-value: 1.32e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1974316043  55 PADLQLCHNVGYKRMRLPNLLEHDSMPE--IKQQANSWVPLLAKRCHSDTQIFLCSLFTPVC---LDQPIYPCRSLCEVV 129
Cdd:cd07888     4 PITLELCMNLPYNTTRYPNYLGHRTQKEasISWESSLFPALVQTNCYKYLMFFACTILVPKCdpvTQQRIPPCRSLCRNS 83
                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1974316043 130 RDSCAPVMESYGFPWPDMLNCNKFP---FDNDLCIT 162
Cdd:cd07888    84 KERCESVLGIVGLQWPEDTDCAQFPeenSDNQTCLL 119
CRD_FZ6 cd07450
Cysteine-rich Wnt-binding domain (CRD) of the frizzled 6 (Fz6) receptor; The cysteine-rich ...
55-154 2.17e-15

Cysteine-rich Wnt-binding domain (CRD) of the frizzled 6 (Fz6) receptor; The cysteine-rich domain (CRD) is an essential extracellular portion of the frizzled 6 (Fz6) receptor, and is required for binding Wnt proteins, which play fundamental roles in many aspects of early development, such as cell and tissue polarity, neural synapse formation, and the regulation of proliferation. Fz proteins serve as Wnt receptors for multiple signal transduction pathways, including both beta-catenin dependent and -independent cellular signaling, as well as the planar cell polarity pathway and Ca(2+) modulating signaling pathway. CRD containing Fzs have been found in diverse species from amoebas to mammals. 10 different frizzled proteins are found in vertebrata. Frizzled 6 (Fz6) is expressed in the skin and hair follicles and controls hair patterning in mammals using a Fz-dependent tissue polarity system, which is similar to the one that patterns the Drosophila cuticle.


Pssm-ID: 143559 [Multi-domain]  Cd Length: 127  Bit Score: 71.34  E-value: 2.17e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1974316043  55 PADLQLCHNVGYKRMRLPNLLEHDSMPEIKQQANSWVPLLAKRCHSDTQIFLCSLFTPVCLDQ--PIYPCRSLCEVVRDS 132
Cdd:cd07450     7 PITVPRCLKMPYNMTFFPNLMGHYDQDIAAVEMEPFLPLANLRCSPNVHTFLCQAFVPTCTEQihVVRPCRELCEKVYSD 86
                          90       100
                  ....*....|....*....|..
gi 1974316043 133 CAPVMESYGFPWPDMLNCNKFP 154
Cdd:cd07450    87 CKKLIDTFGISWPEELECDRLQ 108
NTR pfam01759
UNC-6/NTR/C345C module; Sequence similarity between netrin UNC-6 and C345C complement protein ...
193-290 3.96e-15

UNC-6/NTR/C345C module; Sequence similarity between netrin UNC-6 and C345C complement protein family members, and hence the existence of the UNC-6 module, was first reported in. Subsequently, many additional members of the family were identified on the basis of sequence similarity between the C-terminal domains of netrins, complement proteins C3, C4, C5, secreted frizzled-related proteins, and type I pro-collagen C-proteinase enhancer proteins (PCOLCEs), which are homologous with the N-terminal domains of tissue inhibitors of metalloproteinases (TIMPs). The TIMPs are classified as a separate family in Pfam (pfam00965). This expanded domain family has been named as the NTR module.


Pssm-ID: 396359  Cd Length: 106  Bit Score: 70.06  E-value: 3.96e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1974316043 193 EQMCS-SDFVVKMHIKEIKKENGerRLVATQKKKKVLKVGpLKRKDTKKLVLYMKNaGTCPCPQLdDLSGSFLVMGRKV- 270
Cdd:pfam01759   1 KKACKgSDYVYKVKVLSVEEEGS--FDKYTVKVKEVLKEG-TDKIQRGKVRLFLKR-GDCRCPQL-RLGKEYLIMGKVGd 75
                          90       100       110
                  ....*....|....*....|....*....|
gi 1974316043 271 ---GGRLLV----LAIY---RWEKKNKEMK 290
Cdd:pfam01759  76 legRGRYVLdknsWVEPwptKWECKLRELQ 105
CRD_Carboxypeptidase_Z cd07447
Cysteine-rich domain of carboxypeptidase Z, a member of the carboxypeptidase E family; The ...
50-153 2.42e-13

Cysteine-rich domain of carboxypeptidase Z, a member of the carboxypeptidase E family; The cysteine-rich-domain (CRD) is an essential part of carboxypeptidase Z, a member of the carboxypeptidase E family of metallocarboxypeptidases. This is a group of Zn-dependent enzymes implicated in the intra- and extracellular processing of proteins. Carboxypeptidase Z removes C-terminal basic amino acid residues from its substrates, particularly arginine. The CRD acts as a ligand-binding domain for Wnts involved in developmental processes. CPZ binds and may process Wnt-4, CPZ has also been found to enhance the induction of the homeobox gene Cdx1. During vertebrate embryogenesis, the CRD of CPZ upregulates Pax3, a Wnt reporter gene essential for patterning of somites and limb development.


Pssm-ID: 143556  Cd Length: 128  Bit Score: 65.93  E-value: 2.42e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1974316043  50 QCVDIpaDLQLCHNVGYKRMRLPNLLEHDSMPEIKQQANSWV-----PLLAKRCHSDTQIFLCSLFTPVCL-DQPIYPCR 123
Cdd:cd07447     3 TCTDL--LLSYCSDVSYTQTTFPNLLGHRSREVTEAGAEYLLlsvlhGLLGGECNPDIRLLGCSVLAPRCEnDKVIKPCR 80
                          90       100       110
                  ....*....|....*....|....*....|
gi 1974316043 124 SLCEVVRDSCAPVMESYGFPWPDMLNCNKF 153
Cdd:cd07447    81 STCEALRKRCSHAFDAIQMAWPYFLDCDRF 110
C345C smart00643
Netrin C-terminal Domain;
192-270 2.10e-10

Netrin C-terminal Domain;


Pssm-ID: 214759  Cd Length: 114  Bit Score: 57.38  E-value: 2.10e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1974316043  192 MEQMCSS--DFVVKMHIKEIKKENGERRLvaTQKKKKVLKVGpLKRKDTKKLVLYMKNAG-TCPCPQLDDLSGSFLVMGR 268
Cdd:smart00643   1 LEKACKSdvDYVYKVKVLSVEEEGGFDKY--TVKILEVIKSG-TDELVRGKNKLRVFISRaSCRCPLLLKLGKSYLIMGK 77

                   ..
gi 1974316043  269 KV 270
Cdd:smart00643  78 SG 79
CRD_SMO cd07451
Cysteine-rich domain of the smoothened receptor (Smo) integral membrane protein; The ...
76-160 5.94e-10

Cysteine-rich domain of the smoothened receptor (Smo) integral membrane protein; The cysteine-rich domain (CRD) is part of the smoothened receptor (Smo), an integral membrane protein and one of the key players in the Hedgehog (Hh) signaling pathway, critical for development, cell growth and migration, as well as stem cell maintenance. The CRD of Smo is conserved in vertebrates and can also be identified in invertebrates. The precise function of the CRD in Smo is unknown. Mutations in the Drosophila CRD disrupt Smo activity in vivo, while deletion of the CRD in mammalian cells does not seem to affect the activity of overexpressed Smo.


Pssm-ID: 143560  Cd Length: 132  Bit Score: 56.61  E-value: 5.94e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1974316043  76 EHDSMPEIKQQANSWVPL-LAKRCHSDTQIFLCSLFTPVCLDQPIY-PCRSLCEVVRDSCAPVMESYGfpWPDMLNCNKF 153
Cdd:cd07451    30 DSTTQEEVQEKLHLWSGLrNVPKCWAVIQPLLCALYMPKCENGKVElPSQEMCQATRGPCKIVENERG--WPDFLRCDND 107

                  ....*..
gi 1974316043 154 PFDNDLC 160
Cdd:cd07451   108 RFPPRGC 114
CRD_corin_1 cd07445
One of two cysteine-rich domains of the corin protein, a type II transmembrane serine protease ...
98-153 8.01e-08

One of two cysteine-rich domains of the corin protein, a type II transmembrane serine protease ; The cysteine-rich domain (CRD) is an essential component of corin, a type II transmembrane serine protease which functions as the convertase of the pro-atrial natriuretic peptide (pro-ANP) in the heart. Corin contains two CRDs in its extracellular region, which play an important role in recognition of the physiological substrate, pro-ANP. This model characterizes the first (N-terminal) CRD.


Pssm-ID: 143554  Cd Length: 130  Bit Score: 50.32  E-value: 8.01e-08
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1974316043  98 CHSDTQIFLCSLFTPVCLDQP-----IYPCRSLCEVVRDSCAPVMESYGFPWPDMLNCNKF 153
Cdd:cd07445    49 CYQHIMLFGCSLALPECISDGddrhgLLPCRSFCEAAKEGCEPVLGMVNASWPDFLRCSQF 109
NTR_WFIKKN cd03575
NTR domain, WFIKKN subfamily; WFIKKN proteins contain a C-terminal NTR domain and are putative ...
192-267 2.14e-03

NTR domain, WFIKKN subfamily; WFIKKN proteins contain a C-terminal NTR domain and are putative secreted proteins which may be multivalent protease inhibitors that act on serine proteases as well as metalloproteases. Human WFIKKN and a related protein sharing the same domain architecture were observed to have distinct tissue expression patterns. WFIKKN is also referred to as growth and differentiation factor-associated serum protein-1 (GASP-1). It inhibits the activity of mature myostatin, a specific regulator of skeletal muscle mass and a member of the TGFbeta superfamily.


Pssm-ID: 239630  Cd Length: 109  Bit Score: 37.01  E-value: 2.14e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1974316043 192 MEQMCSSDFVVKMHIKEIKKE-NGERRLVATQKKKKVLKVGpLKRKDTKKL-VLYMKNAGTCPCPQLDDLSGSFLVMG 267
Cdd:cd03575     1 VPSLCRSDFAIVGRLTELTEElDSGHARVTLEEVLKDEKMG-LKFFGTEPLeVTLLNMDWSCPCPNITAGEGPLIIMG 77
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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