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Conserved domains on  [gi|1965124831|ref|XP_039067007|]
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uncharacterized protein LOC120212886 isoform X1 [Hibiscus syriacus]

Protein Classification

glycosyltransferase family 17 protein( domain architecture ID 10520376)

glycosyltransferase family 17 protein may act as a beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase that transfers the bisecting GlcNAc to the core mannose of complex N-glycans

CAZY:  GT17
EC:  2.4.1.144
Gene Ontology:  GO:0006487|GO:0003830

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Glyco_transf_17 pfam04724
Glycosyltransferase family 17; This family represents beta-1,4-mannosyl-glycoprotein beta-1, ...
38-385 0e+00

Glycosyltransferase family 17; This family represents beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (EC:2.4.1.144). This enzyme transfers the bisecting GlcNAc to the core mannose of complex N-glycans. The addition of this residue is regulated during development and has functional consequences for receptor signalling, cell adhesion, and tumour progression.


:

Pssm-ID: 428090  Cd Length: 349  Bit Score: 700.95  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1965124831  38 RGSDIRTYIFLFVVVPPMIFGLYLHGQKITYFLRPLWESPPKPFNELPHYYHENVTMDTLCHLHGWKVRDYPRRVFDAVL 117
Cdd:pfam04724   1 RGLDLKLLLLLLVLVPLCLLGIYLHGQKISYFLRPLWDSPPKPFDEIPHYYAENVSMEHLCKLHGWTLRESPRRVFDAVL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1965124831 118 FSNEIDILTIRWNELYPYVTQFVLLESNSTFTGLPKPLRFAGSREKFKFIKPRLTYGTIGGRFRK-GENPFVEEAYQRVA 196
Cdd:pfam04724  81 FSNELDLLEIRWRELYPYVTQFVILESNTTFTGLPKPLFFAENRDRFAFAESKITYGTIPGRFLKpGEDPFVEEAYQRVA 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1965124831 197 LDQLLRLAGIEDDDLLIMSDVDEIPSAHTINLLRWCDDIPSILHLQLRNYLYSFEYLIDHNSWRASVHRYKKGKTRYAHF 276
Cdd:pfam04724 161 MDQLLRRAGIEEGDLLIMSDVDEIPSAHTIELLRWCDGIPPVLHLQLRNYLYSFEFPVDYKSWRASVHRYQPGKTRYRHS 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1965124831 277 RQSDLLLADAGWHCSFCFRYISDFIFKMKAYSHTDRVRFAHFLNPKRIQDIICRGANLFDMIPEEYTFKDIIGKMGPISH 356
Cdd:pfam04724 241 RQSDVILADAGWHCSFCFRHISEFVFKMKAYSHADRVRRSSLLNPKRIQDVICKGSDLFDMLPEEYTFKELIKKMGPIPR 320
                         330       340
                  ....*....|....*....|....*....
gi 1965124831 357 SYSAVHLPAYLLNNAEKYKYLLPGNCVRE 385
Cdd:pfam04724 321 SYSAVHLPRYLLENAEKFRFLLPGGCLRE 349
 
Name Accession Description Interval E-value
Glyco_transf_17 pfam04724
Glycosyltransferase family 17; This family represents beta-1,4-mannosyl-glycoprotein beta-1, ...
38-385 0e+00

Glycosyltransferase family 17; This family represents beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (EC:2.4.1.144). This enzyme transfers the bisecting GlcNAc to the core mannose of complex N-glycans. The addition of this residue is regulated during development and has functional consequences for receptor signalling, cell adhesion, and tumour progression.


Pssm-ID: 428090  Cd Length: 349  Bit Score: 700.95  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1965124831  38 RGSDIRTYIFLFVVVPPMIFGLYLHGQKITYFLRPLWESPPKPFNELPHYYHENVTMDTLCHLHGWKVRDYPRRVFDAVL 117
Cdd:pfam04724   1 RGLDLKLLLLLLVLVPLCLLGIYLHGQKISYFLRPLWDSPPKPFDEIPHYYAENVSMEHLCKLHGWTLRESPRRVFDAVL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1965124831 118 FSNEIDILTIRWNELYPYVTQFVLLESNSTFTGLPKPLRFAGSREKFKFIKPRLTYGTIGGRFRK-GENPFVEEAYQRVA 196
Cdd:pfam04724  81 FSNELDLLEIRWRELYPYVTQFVILESNTTFTGLPKPLFFAENRDRFAFAESKITYGTIPGRFLKpGEDPFVEEAYQRVA 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1965124831 197 LDQLLRLAGIEDDDLLIMSDVDEIPSAHTINLLRWCDDIPSILHLQLRNYLYSFEYLIDHNSWRASVHRYKKGKTRYAHF 276
Cdd:pfam04724 161 MDQLLRRAGIEEGDLLIMSDVDEIPSAHTIELLRWCDGIPPVLHLQLRNYLYSFEFPVDYKSWRASVHRYQPGKTRYRHS 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1965124831 277 RQSDLLLADAGWHCSFCFRYISDFIFKMKAYSHTDRVRFAHFLNPKRIQDIICRGANLFDMIPEEYTFKDIIGKMGPISH 356
Cdd:pfam04724 241 RQSDVILADAGWHCSFCFRHISEFVFKMKAYSHADRVRRSSLLNPKRIQDVICKGSDLFDMLPEEYTFKELIKKMGPIPR 320
                         330       340
                  ....*....|....*....|....*....
gi 1965124831 357 SYSAVHLPAYLLNNAEKYKYLLPGNCVRE 385
Cdd:pfam04724 321 SYSAVHLPRYLLENAEKFRFLLPGGCLRE 349
 
Name Accession Description Interval E-value
Glyco_transf_17 pfam04724
Glycosyltransferase family 17; This family represents beta-1,4-mannosyl-glycoprotein beta-1, ...
38-385 0e+00

Glycosyltransferase family 17; This family represents beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (EC:2.4.1.144). This enzyme transfers the bisecting GlcNAc to the core mannose of complex N-glycans. The addition of this residue is regulated during development and has functional consequences for receptor signalling, cell adhesion, and tumour progression.


Pssm-ID: 428090  Cd Length: 349  Bit Score: 700.95  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1965124831  38 RGSDIRTYIFLFVVVPPMIFGLYLHGQKITYFLRPLWESPPKPFNELPHYYHENVTMDTLCHLHGWKVRDYPRRVFDAVL 117
Cdd:pfam04724   1 RGLDLKLLLLLLVLVPLCLLGIYLHGQKISYFLRPLWDSPPKPFDEIPHYYAENVSMEHLCKLHGWTLRESPRRVFDAVL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1965124831 118 FSNEIDILTIRWNELYPYVTQFVLLESNSTFTGLPKPLRFAGSREKFKFIKPRLTYGTIGGRFRK-GENPFVEEAYQRVA 196
Cdd:pfam04724  81 FSNELDLLEIRWRELYPYVTQFVILESNTTFTGLPKPLFFAENRDRFAFAESKITYGTIPGRFLKpGEDPFVEEAYQRVA 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1965124831 197 LDQLLRLAGIEDDDLLIMSDVDEIPSAHTINLLRWCDDIPSILHLQLRNYLYSFEYLIDHNSWRASVHRYKKGKTRYAHF 276
Cdd:pfam04724 161 MDQLLRRAGIEEGDLLIMSDVDEIPSAHTIELLRWCDGIPPVLHLQLRNYLYSFEFPVDYKSWRASVHRYQPGKTRYRHS 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1965124831 277 RQSDLLLADAGWHCSFCFRYISDFIFKMKAYSHTDRVRFAHFLNPKRIQDIICRGANLFDMIPEEYTFKDIIGKMGPISH 356
Cdd:pfam04724 241 RQSDVILADAGWHCSFCFRHISEFVFKMKAYSHADRVRRSSLLNPKRIQDVICKGSDLFDMLPEEYTFKELIKKMGPIPR 320
                         330       340
                  ....*....|....*....|....*....
gi 1965124831 357 SYSAVHLPAYLLNNAEKYKYLLPGNCVRE 385
Cdd:pfam04724 321 SYSAVHLPRYLLENAEKFRFLLPGGCLRE 349
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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