NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1958781920|ref|XP_038967719|]
View 

dnaJ homolog subfamily B member 9 isoform X1 [Rattus norvegicus]

Protein Classification

J domain-containing protein( domain architecture ID 1001220)

J domain-containing protein similar to molecular chaperone DnaJ, part of the DnaK-DnaJ-GrpE system, prevents the aggregation of unfolded substrate and acts primarily by stimulating the ATPase activity of Hsp70

CATH:  1.10.287.110
Gene Ontology:  GO:0006457
PubMed:  9644977|8016869|15170475
SCOP:  4000605

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
DnaJ_bact super family cl37091
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 39-146 2.54e-42

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


The actual alignment was detected with superfamily member TIGR02349:

Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 146.59  E-value: 2.54e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781920  39 YYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFTNGKGQRSNG-S 117
Cdd:TIGR02349   2 YYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGGGfN 81

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1958781920 118 PFEQSFNFNFDDLFKDF--NLFGQNQNTRSK 146
Cdd:TIGR02349  82 GFDIGFFGDFGDIFGDFfgGGGGSGRRRRSG 112
 
Name Accession Description Interval E-value
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 39-146 2.54e-42

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 146.59  E-value: 2.54e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781920  39 YYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFTNGKGQRSNG-S 117
Cdd:TIGR02349   2 YYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGGGfN 81

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1958781920 118 PFEQSFNFNFDDLFKDF--NLFGQNQNTRSK 146
Cdd:TIGR02349  82 GFDIGFFGDFGDIFGDFfgGGGGSGRRRRSG 112
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 35-139 5.36e-39

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 138.35  E-value: 5.36e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781920  35 ASKNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFTNGKGqr 113
Cdd:PRK10767    2 AKRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPgDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGGG-- 79

                          90       100
                  ....*....|....*....|....*...
gi 1958781920 114 snGSPFEQSFNFN--FDDLFKDFnlFGQ 139
Cdd:PRK10767   80 --GGGFGGGGGFGdiFGDIFGDI--FGG 103
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 38-122 8.49e-36

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 123.66  E-value: 8.49e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781920  38 NYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKS-PDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFTNGKGQRSNG 116
Cdd:COG0484     1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGdPEAEEKFKEINEAYEVLSDPEKRAAYDRFGHAAELLLATELAES 80


                  ....*.
gi 1958781920 117 SPFEQS 122
Cdd:COG0484    81 AAAEAA 86
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 38-99 1.87e-35

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 120.27  E-value: 1.87e-35
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1958781920  38 NYYDILGVPKSASERQIKKAFHKLAMKYHPDKN-KSPDAEAKFREIAEAYETLSDANRRKEYD 99
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNpGDPEAEEKFKEINEAYEVLSDPEKRAIYD 63
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
37-188 5.15e-30

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 115.69  E-value: 5.15e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781920  37 KNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDIIGHsaftngkgqrsNG 116
Cdd:NF037946    5 RDYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRNKAPDAAEIFAEINEAYEVLSNPEKRANYDKYGH-----------DG 73

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1958781920 117 SPFEQSFNFNFDDLFKDFnlFGQNQNtrSKKHFENHFQ---TRQDGSSRQRHHFQEFSFGGGLfDDMFEDMEKMF 188
Cdd:NF037946   74 VDGEGGFGFDAFDVFSSF--FETINK--SGAFLDDSVDesvSADDDLDRLFDDSKEPSFTSGL-DEIVQFWEAFI 143
DnaJ smart00271
DnaJ molecular chaperone homology domain;
37-94 5.79e-27

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 98.46  E-value: 5.79e-27
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781920   37 KNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKS--PDAEAKFREIAEAYETLSDANR 94
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGdkEEAEEKFKEINEAYEVLSDPEK 60
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 38-91 8.26e-27

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 97.62  E-value: 8.26e-27
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1958781920  38 NYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKS-PDAEAKFREIAEAYETLSD 91
Cdd:cd06257     1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDdPEAEEKFKEINEAYEVLSD 55
 
Name Accession Description Interval E-value
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 39-146 2.54e-42

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 146.59  E-value: 2.54e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781920  39 YYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFTNGKGQRSNG-S 117
Cdd:TIGR02349   2 YYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGGGfN 81

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1958781920 118 PFEQSFNFNFDDLFKDF--NLFGQNQNTRSK 146
Cdd:TIGR02349  82 GFDIGFFGDFGDIFGDFfgGGGGSGRRRRSG 112
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 35-139 5.36e-39

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 138.35  E-value: 5.36e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781920  35 ASKNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFTNGKGqr 113
Cdd:PRK10767    2 AKRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPgDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGGG-- 79

                          90       100
                  ....*....|....*....|....*...
gi 1958781920 114 snGSPFEQSFNFN--FDDLFKDFnlFGQ 139
Cdd:PRK10767   80 --GGGFGGGGGFGdiFGDIFGDI--FGG 103
PRK14291 PRK14291
chaperone protein DnaJ; Provisional
 35-147 4.89e-37

chaperone protein DnaJ; Provisional


Pssm-ID: 237661 [Multi-domain]  Cd Length: 382  Bit Score: 133.36  E-value: 4.89e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781920  35 ASKNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFTNGKGQRS 114
Cdd:PRK14291    1 AKKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKNPEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSGQQQQ 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 1958781920 115 NGSPFEQSFNFNFDDLFKDF-------NLFGQNQNTRSKK 147
Cdd:PRK14291   81 GQEGFSDFGGGNIEDILEDVfdifgfgDIFGRRRATRERR 120
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 38-122 8.49e-36

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 123.66  E-value: 8.49e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781920  38 NYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKS-PDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFTNGKGQRSNG 116
Cdd:COG0484     1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGdPEAEEKFKEINEAYEVLSDPEKRAAYDRFGHAAELLLATELAES 80


                  ....*.
gi 1958781920 117 SPFEQS 122
Cdd:COG0484    81 AAAEAA 86
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 38-99 1.87e-35

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 120.27  E-value: 1.87e-35
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1958781920  38 NYYDILGVPKSASERQIKKAFHKLAMKYHPDKN-KSPDAEAKFREIAEAYETLSDANRRKEYD 99
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNpGDPEAEEKFKEINEAYEVLSDPEKRAIYD 63
PRK14298 PRK14298
chaperone protein DnaJ; Provisional
 36-138 6.86e-32

chaperone protein DnaJ; Provisional


Pssm-ID: 184612 [Multi-domain]  Cd Length: 377  Bit Score: 119.57  E-value: 6.86e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781920  36 SKNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFTNgkgQRSN 115
Cdd:PRK14298    4 TRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEPDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDN---QYSA 80

                          90       100
                  ....*....|....*....|...
gi 1958781920 116 GSPFEQSFNFNFDDLFKDFnlFG 138
Cdd:PRK14298   81 EDIFRGADFGGFGDIFEMF--FG 101
PRK14280 PRK14280
molecular chaperone DnaJ;
34-134 1.46e-31

molecular chaperone DnaJ;


Pssm-ID: 237656 [Multi-domain]  Cd Length: 376  Bit Score: 118.67  E-value: 1.46e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781920  34 LASKNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFTNG-KGQ 112
Cdd:PRK14280    1 MAKRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPNQGfGGG 80

                          90       100
                  ....*....|....*....|..
gi 1958781920 113 RSNGSPFeqSFNFNFDDLFKDF 134
Cdd:PRK14280   81 GFGGGDF--GGGFGFEDIFSSF 100
PRK14295 PRK14295
molecular chaperone DnaJ;
37-131 1.53e-30

molecular chaperone DnaJ;


Pssm-ID: 237665 [Multi-domain]  Cd Length: 389  Bit Score: 116.10  E-value: 1.53e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781920  37 KNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDANRRKEYD----IIGHSAFTNGKG 111
Cdd:PRK14295    9 KDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKgDAKAEERFKEISEAYDVLSDEKKRKEYDearsLFGNGGFRPGPG 88

                          90       100
                  ....*....|....*....|
gi 1958781920 112 QRSNGspfeqSFNFNFDDLF 131
Cdd:PRK14295   89 GGGGG-----GFNFDLGDLF 103
PRK14276 PRK14276
chaperone protein DnaJ; Provisional
 34-144 2.16e-30

chaperone protein DnaJ; Provisional


Pssm-ID: 237653 [Multi-domain]  Cd Length: 380  Bit Score: 115.57  E-value: 2.16e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781920  34 LASKNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFTNGKGQR 113
Cdd:PRK14276    1 MNNTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEPGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANGGFGGG 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1958781920 114 SNG-SPFEQSFNF-NFDDLFKDFnlFGQNQNTR 144
Cdd:PRK14276   81 AGGfGGFDGSGGFgGFEDIFSSF--FGGGGARR 111
PRK14299 PRK14299
chaperone protein DnaJ; Provisional
 34-138 4.25e-30

chaperone protein DnaJ; Provisional


Pssm-ID: 237667 [Multi-domain]  Cd Length: 291  Bit Score: 113.11  E-value: 4.25e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781920  34 LASKNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFTNGKGQR 113
Cdd:PRK14299    1 MAYKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKSPGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGWQGP 80

                          90       100
                  ....*....|....*....|....*...
gi 1958781920 114 SNGSPFEQSFN-FNFDDlFKDF--NLFG 138
Cdd:PRK14299   81 PPGPPGGGDFSgFNVGD-FSDFfqQLFG 107
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
37-188 5.15e-30

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 115.69  E-value: 5.15e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781920  37 KNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDIIGHsaftngkgqrsNG 116
Cdd:NF037946    5 RDYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRNKAPDAAEIFAEINEAYEVLSNPEKRANYDKYGH-----------DG 73

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1958781920 117 SPFEQSFNFNFDDLFKDFnlFGQNQNtrSKKHFENHFQ---TRQDGSSRQRHHFQEFSFGGGLfDDMFEDMEKMF 188
Cdd:NF037946   74 VDGEGGFGFDAFDVFSSF--FETINK--SGAFLDDSVDesvSADDDLDRLFDDSKEPSFTSGL-DEIVQFWEAFI 143
PRK14296 PRK14296
chaperone protein DnaJ; Provisional
 34-144 7.85e-30

chaperone protein DnaJ; Provisional


Pssm-ID: 237666 [Multi-domain]  Cd Length: 372  Bit Score: 114.27  E-value: 7.85e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781920  34 LASKNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFTNGKGQR 113
Cdd:PRK14296    1 MKKKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVLLDKDKRKQYDQFGHAAFDGSSGFS 80

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1958781920 114 SNGSPFEQSFN-------FNFDDLFKDFnlFGQNQNTR 144
Cdd:PRK14296   81 SNFGDFEDLFSnmgssgfSSFTNIFSDF--FGSNKSDY 116
PRK14294 PRK14294
chaperone protein DnaJ; Provisional
 37-146 2.62e-29

chaperone protein DnaJ; Provisional


Pssm-ID: 237664 [Multi-domain]  Cd Length: 366  Bit Score: 112.55  E-value: 2.62e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781920  37 KNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFTNGKGQRSN 115
Cdd:PRK14294    4 RDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPgDKEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLSGTGFSGFS 83

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1958781920 116 GspFEQSFNfNFDDLFKDFNLFGQNQNTRSK 146
Cdd:PRK14294   84 G--FDDIFS-SFGDIFEDFFGFGGGRRGRSR 111
PRK14277 PRK14277
chaperone protein DnaJ; Provisional
 33-147 5.12e-29

chaperone protein DnaJ; Provisional


Pssm-ID: 184599 [Multi-domain]  Cd Length: 386  Bit Score: 112.20  E-value: 5.12e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781920  33 ILASKNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFTNGkG 111
Cdd:PRK14277    1 MAAKKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPgDKEAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPG-G 79

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 1958781920 112 QRSNG---SPFEQSFnFNFD-----DLFKDF--NLFGqnqNTRSKK 147
Cdd:PRK14277   80 FGQGGfgqGGFGGGG-FDFDfggfgDIFEDIfgDFFG---TGRRRA 121
PRK14283 PRK14283
chaperone protein DnaJ; Provisional
 33-134 1.25e-28

chaperone protein DnaJ; Provisional


Pssm-ID: 184604 [Multi-domain]  Cd Length: 378  Bit Score: 111.07  E-value: 1.25e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781920  33 ILASKNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFtngkgq 112
Cdd:PRK14283    1 MAEKRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEEEGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGM------ 74

                          90       100
                  ....*....|....*....|...
gi 1958781920 113 rsNGSPFEQSF-NFNFDDLFKDF 134
Cdd:PRK14283   75 --DGFSQEDIFnNINFEDIFQGF 95
PRK14297 PRK14297
molecular chaperone DnaJ;
34-146 1.85e-28

molecular chaperone DnaJ;


Pssm-ID: 184611 [Multi-domain]  Cd Length: 380  Bit Score: 110.64  E-value: 1.85e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781920  34 LASKNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFTNGKGQ 112
Cdd:PRK14297    1 MASKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKgNKEAEEKFKEINEAYQVLSDPQKKAQYDQFGTADFNGAGGF 80

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1958781920 113 RSNG-SPFEQSFNFNFDDLFKDFNLFGQNQNTRSK 146
Cdd:PRK14297   81 GSGGfGGFDFSDMGGFGDIFDSFFGGGFGSSSRRR 115
PRK14281 PRK14281
chaperone protein DnaJ; Provisional
 37-164 2.76e-28

chaperone protein DnaJ; Provisional


Pssm-ID: 237657 [Multi-domain]  Cd Length: 397  Bit Score: 110.28  E-value: 2.76e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781920  37 KNYYDILGVPKSASERQIKKAFHKLAMKYHPDKN-KSPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFtnGKGQRSN 115
Cdd:PRK14281    3 RDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNpDNKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGV--GSSAASG 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1958781920 116 GSPFEQSFNFNFDDLFKDFN-LFGQNQNTR--SKKHFENHFqtrqDGSSRQR 164
Cdd:PRK14281   81 GGPGYGGGGGDFNDIFSAFNdMFGGGARRGggSPFGFEDVF----GGGGRRR 128
PRK10266 PRK10266
curved DNA-binding protein;
37-148 1.17e-27

curved DNA-binding protein;


Pssm-ID: 182347 [Multi-domain]  Cd Length: 306  Bit Score: 106.83  E-value: 1.17e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781920  37 KNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDII----GHSAFtNGKGQ 112
Cdd:PRK10266    4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQLwqhrNDPQF-NRQFQ 82

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1958781920 113 RSNGSPFEQSfnfNFDDLFKDFnlFGQNQNTRSKKH 148
Cdd:PRK10266   83 HGDGQSFNAE---DFDDIFSSI--FGQHARQSRQRP 113
SEC63 COG5407
Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular ...
 38-97 4.37e-27

Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 444165 [Multi-domain]  Cd Length: 61  Bit Score: 98.53  E-value: 4.37e-27
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1958781920  38 NYYDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDANRRKE 97
Cdd:COG5407     1 DPYEVLGVAKTASADEIKKAYRKLAKKYHPDRNKgDPKAEERFKEINEAYELLSDAEKRAR 61
PRK14301 PRK14301
chaperone protein DnaJ; Provisional
 37-138 5.60e-27

chaperone protein DnaJ; Provisional


Pssm-ID: 237668 [Multi-domain]  Cd Length: 373  Bit Score: 106.36  E-value: 5.60e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781920  37 KNYYDILGVPKSASERQIKKAFHKLAMKYHPDKN-KSPDAEAKFREIAEAYETLSDANRRKEYDIIGHsAFTNGKGQRSN 115
Cdd:PRK14301    4 RDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNpDNPEAEQKFKEAAEAYEVLRDAEKRARYDRFGH-AGVNGNGGFGG 82

                          90       100
                  ....*....|....*....|...
gi 1958781920 116 GSPFEQSFNfNFDDLFKDFNLFG 138
Cdd:PRK14301   83 FSSAEDIFS-HFSDIFGDLFGFS 104
DnaJ smart00271
DnaJ molecular chaperone homology domain;
37-94 5.79e-27

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 98.46  E-value: 5.79e-27
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781920   37 KNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKS--PDAEAKFREIAEAYETLSDANR 94
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGdkEEAEEKFKEINEAYEVLSDPEK 60
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 38-91 8.26e-27

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 97.62  E-value: 8.26e-27
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1958781920  38 NYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKS-PDAEAKFREIAEAYETLSD 91
Cdd:cd06257     1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDdPEAEEKFKEINEAYEVLSD 55
PRK14300 PRK14300
chaperone protein DnaJ; Provisional
 36-233 1.08e-26

chaperone protein DnaJ; Provisional


Pssm-ID: 172788 [Multi-domain]  Cd Length: 372  Bit Score: 105.48  E-value: 1.08e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781920  36 SKNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFTN--GKGQR 113
Cdd:PRK14300    2 SQDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDAKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQNqqSRGGG 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781920 114 SNGSPFEQSFNFNFDDLFKDFnlFGQNQNTRSKkhfenhfqtrqdgSSRQRHHFQEFSFGGGLfDDMFEDMEKMFSFSGf 193
Cdd:PRK14300   82 GNHGGFHPDINDIFGDFFSDF--MGGSRRSRPT-------------SSKVRGSDLKYNLTINL-EEAFHGIEKNISFSS- 144

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1958781920 194 dstnrrTVQTeNRFHGSSkhcrtvtQRRGNMVTTYTDCSG 233
Cdd:PRK14300  145 ------EVKC-DTCHGSG-------SEKGETVTTCDACSG 170
PRK14289 PRK14289
molecular chaperone DnaJ;
35-138 2.35e-26

molecular chaperone DnaJ;


Pssm-ID: 237660 [Multi-domain]  Cd Length: 386  Bit Score: 104.91  E-value: 2.35e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781920  35 ASKNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDANRRKEYDIIGHSaftnGKGQR 113
Cdd:PRK14289    3 EKRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPgDKEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHA----GVGGA 78

                          90       100
                  ....*....|....*....|....*.
gi 1958781920 114 SNGSPFEQSfNFNFDDLFKDF-NLFG 138
Cdd:PRK14289   79 AGGGGFSGE-GMSMEDIFSMFgDIFG 103
PRK14286 PRK14286
chaperone protein DnaJ; Provisional
 34-139 4.10e-26

chaperone protein DnaJ; Provisional


Pssm-ID: 172774 [Multi-domain]  Cd Length: 372  Bit Score: 103.92  E-value: 4.10e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781920  34 LASKNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFTNGKGQ 112
Cdd:PRK14286    1 MSERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKgNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNAGAGG 80

                          90       100
                  ....*....|....*....|....*...
gi 1958781920 113 rsngspFEQSFNFNFDDLFKDF-NLFGQ 139
Cdd:PRK14286   81 ------FGQGAYTDFSDIFGDFgDIFGD 102
PRK14285 PRK14285
chaperone protein DnaJ; Provisional
 37-147 4.55e-26

chaperone protein DnaJ; Provisional


Pssm-ID: 172773 [Multi-domain]  Cd Length: 365  Bit Score: 103.92  E-value: 4.55e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781920  37 KNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFTNGKGQRSN 115
Cdd:PRK14285    3 RDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKgNKEAESIFKEATEAYEVLIDDNKRAQYDRFGHTAFEGGGGFEGF 82

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 1958781920 116 GSPFEqsfnfNFDDLFKDF-NLF--------GQNQNTRSKK 147
Cdd:PRK14285   83 SGGFS-----GFSDIFEDFgDIFdsfftgnrGQDKNRKHEK 118
PRK14282 PRK14282
chaperone protein DnaJ; Provisional
 35-147 2.61e-25

chaperone protein DnaJ; Provisional


Pssm-ID: 184603 [Multi-domain]  Cd Length: 369  Bit Score: 101.79  E-value: 2.61e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781920  35 ASKNYYDILGVPKSASERQIKKAFHKLAMKYHPDKN--KSPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFTNGKGQ 112
Cdd:PRK14282    2 EKKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHpeNRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVGEQPPYQE 81

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 1958781920 113 RSNGSPFeqsfnfnFDDLFKD---------FNLFGQNQNTRSKK 147
Cdd:PRK14282   82 TESGGGF-------FEDIFKDfenifnrdiFDIFFGERRTQEEQ 118
CbpA COG2214
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];
37-107 2.59e-24

Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];


Pssm-ID: 441816 [Multi-domain]  Cd Length: 91  Bit Score: 92.47  E-value: 2.59e-24
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1958781920  37 KNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPD--AEAKFREIAEAYETLSDANRRKEYD-IIGHSAFT 107
Cdd:COG2214     5 KDHYAVLGVPPDASLEEIRQAYRRLAKLLHPDRGGELKalAEELFQRLNEAYEVLSDPERRAEYDrELGQSGKG 78
PRK14278 PRK14278
chaperone protein DnaJ; Provisional
 36-144 1.20e-23

chaperone protein DnaJ; Provisional


Pssm-ID: 237654 [Multi-domain]  Cd Length: 378  Bit Score: 97.43  E-value: 1.20e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781920  36 SKNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFTNGKGqrsn 115
Cdd:PRK14278    2 ARDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPDEEAQEKFKEISVAYEVLSDPEKRRIVDLGGDPLESAGGG---- 77

                          90       100
                  ....*....|....*....|....*....
gi 1958781920 116 GSPFEQSFNfNFDDLFKDFnlFGQNQNTR 144
Cdd:PRK14278   78 GGGFGGGFG-GLGDVFEAF--FGGGAASR 103
PRK14287 PRK14287
chaperone protein DnaJ; Provisional
 34-134 1.93e-23

chaperone protein DnaJ; Provisional


Pssm-ID: 237659 [Multi-domain]  Cd Length: 371  Bit Score: 96.62  E-value: 1.93e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781920  34 LASKNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFTNGKGQR 113
Cdd:PRK14287    1 MSKRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKAPDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTDPNQGFGGG 80

                          90       100
                  ....*....|....*....|.
gi 1958781920 114 SNGspfeqSFNfNFDDLFKDF 134
Cdd:PRK14287   81 GAG-----DFG-GFSDIFDMF 95
PRK14290 PRK14290
chaperone protein DnaJ; Provisional
 36-145 2.29e-23

chaperone protein DnaJ; Provisional


Pssm-ID: 172778 [Multi-domain]  Cd Length: 365  Bit Score: 96.54  E-value: 2.29e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781920  36 SKNYYDILGVPKSASERQIKKAFHKLAMKYHPDKN--KSPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFtNGKGQR 113
Cdd:PRK14290    2 AKDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHpgNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDF-GAGGSN 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 1958781920 114 SN----------GSPFEQSFNFNFDDLFkdFNLFGQNQNTRS 145
Cdd:PRK14290   81 FNwdnfthfsdiNDIFNQIFGGNFGSDF--FSGFGNQQSTRN 120
PRK14293 PRK14293
molecular chaperone DnaJ;
38-111 5.56e-22

molecular chaperone DnaJ;


Pssm-ID: 237663 [Multi-domain]  Cd Length: 374  Bit Score: 92.75  E-value: 5.56e-22
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1958781920  38 NYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFTNGKG 111
Cdd:PRK14293    4 DYYEILGVSRDADKDELKRAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSDPETRARYDQFGEAGVSGAAG 77
PRK14279 PRK14279
molecular chaperone DnaJ;
35-131 6.48e-22

molecular chaperone DnaJ;


Pssm-ID: 237655 [Multi-domain]  Cd Length: 392  Bit Score: 92.87  E-value: 6.48e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781920  35 ASKNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDANRRKEYD----IIGHSAFtnG 109
Cdd:PRK14279    7 VEKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPgDPAAEERFKAVSEAHDVLSDPAKRKEYDetrrLFAGGGF--G 84

                          90       100
                  ....*....|....*....|....*...
gi 1958781920 110 KGQRSNGSPF------EQSFNFNFDDLF 131
Cdd:PRK14279   85 GRRFDGGGGFggfgtgGDGAEFNLNDLF 112
PRK14284 PRK14284
chaperone protein DnaJ; Provisional
 38-111 1.28e-21

chaperone protein DnaJ; Provisional


Pssm-ID: 237658 [Multi-domain]  Cd Length: 391  Bit Score: 91.83  E-value: 1.28e-21
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1958781920  38 NYYDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFTNGKG 111
Cdd:PRK14284    2 DYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPgDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPFAGAG 76
PRK14292 PRK14292
chaperone protein DnaJ; Provisional
 38-138 2.64e-21

chaperone protein DnaJ; Provisional


Pssm-ID: 237662 [Multi-domain]  Cd Length: 371  Bit Score: 90.72  E-value: 2.64e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781920  38 NYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFTNGKGqrsnGS 117
Cdd:PRK14292    3 DYYELLGVSRTASADEIKSAYRKLALKYHPDRNKEKGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAPGAGMPG----GD 78

                          90       100
                  ....*....|....*....|.
gi 1958781920 118 PFeQSFNFNFDDLFKdfNLFG 138
Cdd:PRK14292   79 PF-GGMGFDPMDIFE--QLFG 96
PTZ00037 PTZ00037
DnaJ_C chaperone protein; Provisional
 36-111 4.82e-17

DnaJ_C chaperone protein; Provisional


Pssm-ID: 240236 [Multi-domain]  Cd Length: 421  Bit Score: 79.09  E-value: 4.82e-17
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1958781920  36 SKNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDaeaKFREIAEAYETLSDANRRKEYDIIGHSAFTNGKG 111
Cdd:PTZ00037   27 NEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGDPE---KFKEISRAYEVLSDPEKRKIYDEYGEEGLEGGEQ 99
DjlA COG1076
DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];
34-96 1.83e-14

DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440694 [Multi-domain]  Cd Length: 75  Bit Score: 65.97  E-value: 1.83e-14
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781920  34 LASKNYYDILGVPKSASERQIKKAFHKLAMKYHPDK--NKSPD-----AEAKFREIAEAYETLSDANRRK 96
Cdd:COG1076     1 MQLDDAFELLGLPPDADDAELKRAYRKLQREHHPDRlaAGLPEeeqrlALQKAAAINEAYETLKDPRGID 70
PRK14288 PRK14288
molecular chaperone DnaJ;
38-146 7.87e-14

molecular chaperone DnaJ;


Pssm-ID: 172776 [Multi-domain]  Cd Length: 369  Bit Score: 69.72  E-value: 7.87e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781920  38 NYYDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFTNGKGQRSNG 116
Cdd:PRK14288    4 SYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAgDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQAGASQSDF 83

                          90       100       110
                  ....*....|....*....|....*....|
gi 1958781920 117 SPFEQSFNFNFDDLFKdfnlFGQNQNTRSK 146
Cdd:PRK14288   84 SDFFEDLGSFFEDAFG----FGARGSKRQK 109
PTZ00341 PTZ00341
Ring-infected erythrocyte surface antigen; Provisional
 39-103 2.36e-11

Ring-infected erythrocyte surface antigen; Provisional


Pssm-ID: 173534 [Multi-domain]  Cd Length: 1136  Bit Score: 62.88  E-value: 2.36e-11
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1958781920   39 YYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDIIGH 103
Cdd:PTZ00341   575 FYDILGVGVNADMKEISERYFKLAENYYPPKRSGNEGFHKFKKINEAYQILGDIDKKKMYNKFGY 639
hscB PRK01356
co-chaperone HscB; Provisional
 38-146 1.77e-09

co-chaperone HscB; Provisional


Pssm-ID: 167217 [Multi-domain]  Cd Length: 166  Bit Score: 54.88  E-value: 1.77e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781920  38 NYYDILGVPK--SASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIA----EAYETLSDANRRKEYDIIGHSAFTNGKG 111
Cdd:PRK01356    3 NYFQLLGLPQeyNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIAselnNAYSTLKDALKRAEYMLLLQNINLNDEK 82

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1958781920 112 QRSNGSPFEQSFNFNFDDLFKDFNLFGQNQNTRSK 146
Cdd:PRK01356   83 TRSLLSPLELSIFWDEMERIENTILFSDLEKIKNK 117
ZUO1 COG5269
Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / ...
 38-99 3.29e-07

Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227594 [Multi-domain]  Cd Length: 379  Bit Score: 50.03  E-value: 3.29e-07
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1958781920  38 NYYDILGVPK---SASERQIKKAFHKLAMKYHPDKNK---SPDAEAKFREIAEAYETLSDANRRKEYD 99
Cdd:COG5269    44 DLYALLGLSKyrtKAIPPQILKAHKKKVYKYHPDKTAaggNKGCDEFFKLIQKAREVLGDRKLRLQYD 111
djlA PRK09430
co-chaperone DjlA;
40-87 1.48e-04

co-chaperone DjlA;


Pssm-ID: 236512 [Multi-domain]  Cd Length: 267  Bit Score: 41.72  E-value: 1.48e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1958781920  40 YDILGVPKSASERQIKKAFHKLAMKYHPDK--NK--SPD----AEAKFREIAEAYE 87
Cdd:PRK09430  203 YKVLGVSESDDDQEIKRAYRKLMSEHHPDKlvAKglPPEmmemAKEKAQEIQAAYE 258
hscB TIGR00714
Fe-S protein assembly co-chaperone HscB; This model describes the small subunit, Hsc20 (20K ...
 51-122 1.13e-03

Fe-S protein assembly co-chaperone HscB; This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock. [Protein fate, Protein folding and stabilization]


Pssm-ID: 211601 [Multi-domain]  Cd Length: 155  Bit Score: 38.33  E-value: 1.13e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1958781920  51 ERQIKKAFHKLAMKYHPDKNKSPDAEA----KFREIAEAYETLSDANRRKEYDIIGHSAFTNG--KGQRSNGSPFEQS 122
Cdd:TIGR00714   5 QSRLRKRYRQLQAQYHPDASGMAQEQLaasqQSTTLNQAYHTLKDPLRRAEYMLKLLNIDLTQeqTSERDTAFPMELL 82
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH