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Conserved domains on  [gi|1958768278|ref|XP_038963034|]
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polyunsaturated fatty acid 5-lipoxygenase isoform X1 [Rattus norvegicus]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Lipoxygenase super family cl37981
Lipoxygenase;
76-520 9.71e-72

Lipoxygenase;


The actual alignment was detected with superfamily member pfam00305:

Pssm-ID: 459754 [Multi-domain]  Cd Length: 672  Bit Score: 241.24  E-value: 9.71e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768278  76 ERVKNHWQEDLMFGYQFLNGCNPVLIKRCTELP--KKL-P---------VTTEMVECSLERqLSLEQEVQEGNIFIVDYE 143
Cdd:pfam00305 183 KRDKFAWLRDEEFARQTLAGLNPVSIRLLTEFPpkSKLdPeiygpqesaITEEHIEKQLEG-LTVEEALEQKKLFILDYH 261
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768278 144 -----LLDGIdaNKTDPCThqfLAAPICLLYKNLANKIVPIAIQLNQTP-----GEKNPIFLPT-DSKYDWL--LAKIWV 210
Cdd:pfam00305 262 dlllpYLNRI--NALEGTK---LYASRTLLFLTDDGTLKPLAIELSLPPsggkhPQWKRVFTPAsDGTEDWLwqLAKAHV 336
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768278 211 RSSDFHIHQTITHLLRTHLVSEVFGIAMYRQLPAVHPLFKLLVAHVRFTIAINTKAREQLICEYGLFDKANATGGGGhVQ 290
Cdd:pfam00305 337 AVNDSGYHQLVSHWLRTHAVMEPFIIATNRQLSVMHPIYKLLHPHFRYTMEINALARQSLINAGGIIESTFFPGKYS-ME 415
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768278 291 MVQRAVQDL---TYSSLcfPEAIKARGM---DNT---------EDIPYyfyRDDGLLVWEAIQSFTTEVVSIYYEDDQVV 355
Cdd:pfam00305 416 MSSVAYKDLwrfDEQAL--PADLIKRGMaveDPSaphglrlliEDYPY---ANDGLEIWDAIKQWVTDYVNHYYPDDSAV 490
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768278 356 EEDQELQDFVKDVYVYGMRGRK-ASGFPKsIKSREKLSEYLTVVIFTASAQHAAVNFGQYDWCSWIPNAPPTMRAPPPTa 434
Cdd:pfam00305 491 QSDTELQAWWKEVREVGHGDKKdEPWWPK-LDTKEDLIEILTTIIWIASAHHAAVNFGQYPYAGYFPNRPTISRRLMPE- 568
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768278 435 KGVVTIEQIV--------DTLPDRGRSCWHLGAVWALSQFQENELFLGMYPEEHFIEKP-VKEAMIRFRKNLEAIVSVIA 505
Cdd:pfam00305 569 EGTPEYEEFLenpekfflSTIPSQLQATLVMAVLEILSTHSPDEEYLGQRDEPSWTSDPeILAAFERFSAKLKEIEGIID 648
                         490       500
                  ....*....|....*....|....
gi 1958768278 506 ERNKNKKL---------PYYYLSP 520
Cdd:pfam00305 649 ERNKDPKLknrcgpgvvPYELLKP 672
 
Name Accession Description Interval E-value
Lipoxygenase pfam00305
Lipoxygenase;
76-520 9.71e-72

Lipoxygenase;


Pssm-ID: 459754 [Multi-domain]  Cd Length: 672  Bit Score: 241.24  E-value: 9.71e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768278  76 ERVKNHWQEDLMFGYQFLNGCNPVLIKRCTELP--KKL-P---------VTTEMVECSLERqLSLEQEVQEGNIFIVDYE 143
Cdd:pfam00305 183 KRDKFAWLRDEEFARQTLAGLNPVSIRLLTEFPpkSKLdPeiygpqesaITEEHIEKQLEG-LTVEEALEQKKLFILDYH 261
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768278 144 -----LLDGIdaNKTDPCThqfLAAPICLLYKNLANKIVPIAIQLNQTP-----GEKNPIFLPT-DSKYDWL--LAKIWV 210
Cdd:pfam00305 262 dlllpYLNRI--NALEGTK---LYASRTLLFLTDDGTLKPLAIELSLPPsggkhPQWKRVFTPAsDGTEDWLwqLAKAHV 336
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768278 211 RSSDFHIHQTITHLLRTHLVSEVFGIAMYRQLPAVHPLFKLLVAHVRFTIAINTKAREQLICEYGLFDKANATGGGGhVQ 290
Cdd:pfam00305 337 AVNDSGYHQLVSHWLRTHAVMEPFIIATNRQLSVMHPIYKLLHPHFRYTMEINALARQSLINAGGIIESTFFPGKYS-ME 415
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768278 291 MVQRAVQDL---TYSSLcfPEAIKARGM---DNT---------EDIPYyfyRDDGLLVWEAIQSFTTEVVSIYYEDDQVV 355
Cdd:pfam00305 416 MSSVAYKDLwrfDEQAL--PADLIKRGMaveDPSaphglrlliEDYPY---ANDGLEIWDAIKQWVTDYVNHYYPDDSAV 490
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768278 356 EEDQELQDFVKDVYVYGMRGRK-ASGFPKsIKSREKLSEYLTVVIFTASAQHAAVNFGQYDWCSWIPNAPPTMRAPPPTa 434
Cdd:pfam00305 491 QSDTELQAWWKEVREVGHGDKKdEPWWPK-LDTKEDLIEILTTIIWIASAHHAAVNFGQYPYAGYFPNRPTISRRLMPE- 568
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768278 435 KGVVTIEQIV--------DTLPDRGRSCWHLGAVWALSQFQENELFLGMYPEEHFIEKP-VKEAMIRFRKNLEAIVSVIA 505
Cdd:pfam00305 569 EGTPEYEEFLenpekfflSTIPSQLQATLVMAVLEILSTHSPDEEYLGQRDEPSWTSDPeILAAFERFSAKLKEIEGIID 648
                         490       500
                  ....*....|....*....|....
gi 1958768278 506 ERNKNKKL---------PYYYLSP 520
Cdd:pfam00305 649 ERNKDPKLknrcgpgvvPYELLKP 672
PLN02337 PLN02337
lipoxygenase
20-529 1.84e-62

lipoxygenase


Pssm-ID: 215193 [Multi-domain]  Cd Length: 866  Bit Score: 219.55  E-value: 1.84e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768278  20 PRDIQFDSEKGVDFVLNYSKAMENLFINRFMHMFQSSWHDFADFEKIF------VKISN--TISERVKN----------- 80
Cdd:PLN02337  261 PRDERFGHLKMSDFLAYALKAIAQVLVPELEALFDKTPNEFDSFEDVLklyeggIKLPNgpLLEELRKNiplemlkellr 340
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768278  81 --------------------HWQEDLMFGYQFLNGCNPVLIKRCTELPKKL------------PVTTEMVECSLErQLSL 128
Cdd:PLN02337  341 tdgeyllkfpmpqvikedksAWRTDEEFAREMLAGVNPVVIRRLTEFPPKSkldpkkygdqnsSITEEHIEKNLE-GLTV 419
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768278 129 EQEVQEGNIFIVDYEllDG-----IDANKTDPCTHqflaAPICLLYKNLANKIVPIAIQLN------QTPGEKNPIFLPT 197
Cdd:PLN02337  420 QEALEKNRLFILDHH--DAlmpylRRINSTSTKTY----ATRTLLFLKDDGTLKPLAIELSlphpqgDKFGAVSKVYTPA 493
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768278 198 DSKYD---WLLAKIWVRSSDFHIHQTITHLLRTHLVSEVFGIAMYRQLPAVHPLFKLLVAHVRFTIAINTKAREQLICEY 274
Cdd:PLN02337  494 EDGVEgsvWQLAKAYVAVNDSGYHQLISHWLNTHAVIEPFVIATNRQLSVLHPIHKLLHPHFRDTMNINALARQILINAG 573
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768278 275 GLFDKANATGGGGhVQMVQRAVQDLTYSSLCFPEAIKARGMdNTED----------IPYYFYRDDGLLVWEAIQSFTTEV 344
Cdd:PLN02337  574 GILESTVFPGKYA-LEMSSVVYKNWNFTEQALPADLIKRGV-AVEDpssphgvrllIEDYPYAVDGLEIWSAIETWVKEY 651
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768278 345 VSIYYEDDQVVEEDQELQDFVKDVYVYGMRGRK-ASGFPKsIKSREKLSEYLTVVIFTASAQHAAVNFGQYDWCSWIPNA 423
Cdd:PLN02337  652 CAFYYPTDDMVQGDTELQSWWKEVREEGHGDLKdEPWWPK-MQTVAELIESCTIIIWIASALHAAVNFGQYPYAGYLPNR 730
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768278 424 PPTMRAPPPtAKG---------------VVTIEQIVDTLpdrgrscwhLGA--VWALSQFQENELFLGM--YPEEHFIEK 484
Cdd:PLN02337  731 PTVSRRFMP-EPGtpeyeeleknpdkafLKTITAQLQTL---------LGIslIEILSRHSSDEVYLGQrdTPEWTSDAE 800
                         570       580       590       600       610       620
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1958768278 485 PVkEAMIRFRKNLEAIVSVIAERNKNKKL---------PYYYLSPDR-------------IPNSVAI 529
Cdd:PLN02337  801 PL-EAFKRFGERLVEIENRIVDMNKDPRLknrvgpvkmPYTLLYPNTsdytgeggltgkgIPNSVSI 866
 
Name Accession Description Interval E-value
Lipoxygenase pfam00305
Lipoxygenase;
76-520 9.71e-72

Lipoxygenase;


Pssm-ID: 459754 [Multi-domain]  Cd Length: 672  Bit Score: 241.24  E-value: 9.71e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768278  76 ERVKNHWQEDLMFGYQFLNGCNPVLIKRCTELP--KKL-P---------VTTEMVECSLERqLSLEQEVQEGNIFIVDYE 143
Cdd:pfam00305 183 KRDKFAWLRDEEFARQTLAGLNPVSIRLLTEFPpkSKLdPeiygpqesaITEEHIEKQLEG-LTVEEALEQKKLFILDYH 261
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768278 144 -----LLDGIdaNKTDPCThqfLAAPICLLYKNLANKIVPIAIQLNQTP-----GEKNPIFLPT-DSKYDWL--LAKIWV 210
Cdd:pfam00305 262 dlllpYLNRI--NALEGTK---LYASRTLLFLTDDGTLKPLAIELSLPPsggkhPQWKRVFTPAsDGTEDWLwqLAKAHV 336
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768278 211 RSSDFHIHQTITHLLRTHLVSEVFGIAMYRQLPAVHPLFKLLVAHVRFTIAINTKAREQLICEYGLFDKANATGGGGhVQ 290
Cdd:pfam00305 337 AVNDSGYHQLVSHWLRTHAVMEPFIIATNRQLSVMHPIYKLLHPHFRYTMEINALARQSLINAGGIIESTFFPGKYS-ME 415
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768278 291 MVQRAVQDL---TYSSLcfPEAIKARGM---DNT---------EDIPYyfyRDDGLLVWEAIQSFTTEVVSIYYEDDQVV 355
Cdd:pfam00305 416 MSSVAYKDLwrfDEQAL--PADLIKRGMaveDPSaphglrlliEDYPY---ANDGLEIWDAIKQWVTDYVNHYYPDDSAV 490
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768278 356 EEDQELQDFVKDVYVYGMRGRK-ASGFPKsIKSREKLSEYLTVVIFTASAQHAAVNFGQYDWCSWIPNAPPTMRAPPPTa 434
Cdd:pfam00305 491 QSDTELQAWWKEVREVGHGDKKdEPWWPK-LDTKEDLIEILTTIIWIASAHHAAVNFGQYPYAGYFPNRPTISRRLMPE- 568
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768278 435 KGVVTIEQIV--------DTLPDRGRSCWHLGAVWALSQFQENELFLGMYPEEHFIEKP-VKEAMIRFRKNLEAIVSVIA 505
Cdd:pfam00305 569 EGTPEYEEFLenpekfflSTIPSQLQATLVMAVLEILSTHSPDEEYLGQRDEPSWTSDPeILAAFERFSAKLKEIEGIID 648
                         490       500
                  ....*....|....*....|....
gi 1958768278 506 ERNKNKKL---------PYYYLSP 520
Cdd:pfam00305 649 ERNKDPKLknrcgpgvvPYELLKP 672
PLN02337 PLN02337
lipoxygenase
20-529 1.84e-62

lipoxygenase


Pssm-ID: 215193 [Multi-domain]  Cd Length: 866  Bit Score: 219.55  E-value: 1.84e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768278  20 PRDIQFDSEKGVDFVLNYSKAMENLFINRFMHMFQSSWHDFADFEKIF------VKISN--TISERVKN----------- 80
Cdd:PLN02337  261 PRDERFGHLKMSDFLAYALKAIAQVLVPELEALFDKTPNEFDSFEDVLklyeggIKLPNgpLLEELRKNiplemlkellr 340
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768278  81 --------------------HWQEDLMFGYQFLNGCNPVLIKRCTELPKKL------------PVTTEMVECSLErQLSL 128
Cdd:PLN02337  341 tdgeyllkfpmpqvikedksAWRTDEEFAREMLAGVNPVVIRRLTEFPPKSkldpkkygdqnsSITEEHIEKNLE-GLTV 419
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768278 129 EQEVQEGNIFIVDYEllDG-----IDANKTDPCTHqflaAPICLLYKNLANKIVPIAIQLN------QTPGEKNPIFLPT 197
Cdd:PLN02337  420 QEALEKNRLFILDHH--DAlmpylRRINSTSTKTY----ATRTLLFLKDDGTLKPLAIELSlphpqgDKFGAVSKVYTPA 493
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768278 198 DSKYD---WLLAKIWVRSSDFHIHQTITHLLRTHLVSEVFGIAMYRQLPAVHPLFKLLVAHVRFTIAINTKAREQLICEY 274
Cdd:PLN02337  494 EDGVEgsvWQLAKAYVAVNDSGYHQLISHWLNTHAVIEPFVIATNRQLSVLHPIHKLLHPHFRDTMNINALARQILINAG 573
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768278 275 GLFDKANATGGGGhVQMVQRAVQDLTYSSLCFPEAIKARGMdNTED----------IPYYFYRDDGLLVWEAIQSFTTEV 344
Cdd:PLN02337  574 GILESTVFPGKYA-LEMSSVVYKNWNFTEQALPADLIKRGV-AVEDpssphgvrllIEDYPYAVDGLEIWSAIETWVKEY 651
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768278 345 VSIYYEDDQVVEEDQELQDFVKDVYVYGMRGRK-ASGFPKsIKSREKLSEYLTVVIFTASAQHAAVNFGQYDWCSWIPNA 423
Cdd:PLN02337  652 CAFYYPTDDMVQGDTELQSWWKEVREEGHGDLKdEPWWPK-MQTVAELIESCTIIIWIASALHAAVNFGQYPYAGYLPNR 730
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768278 424 PPTMRAPPPtAKG---------------VVTIEQIVDTLpdrgrscwhLGA--VWALSQFQENELFLGM--YPEEHFIEK 484
Cdd:PLN02337  731 PTVSRRFMP-EPGtpeyeeleknpdkafLKTITAQLQTL---------LGIslIEILSRHSSDEVYLGQrdTPEWTSDAE 800
                         570       580       590       600       610       620
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1958768278 485 PVkEAMIRFRKNLEAIVSVIAERNKNKKL---------PYYYLSPDR-------------IPNSVAI 529
Cdd:PLN02337  801 PL-EAFKRFGERLVEIENRIVDMNKDPRLknrvgpvkmPYTLLYPNTsdytgeggltgkgIPNSVSI 866
PLN02264 PLN02264
lipoxygenase
19-529 1.44e-56

lipoxygenase


Pssm-ID: 215148 [Multi-domain]  Cd Length: 919  Bit Score: 203.63  E-value: 1.44e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768278  19 LPRDIQFDSEKGVDFVLNYSKA-MENLFINRFMHMFQSSWHDFADFEKIF--------------------VKISNTISE- 76
Cdd:PLN02264  320 VPRDEQFEESKQDTFAAGRLKAvLHNLIPSLKASILAEDFANFGEIDSLYkeglllklgfqddifkkfplPKVVTTLQEs 399
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768278  77 --------------RVKNHWQEDLMFGYQFLNGCNPVLIKRCTELPKKLPVTTEM---VECSLERQ--------LSLEQE 131
Cdd:PLN02264  400 segllkydtpkilsKDKFAWLRDDEFARQAIAGINPVNIERVKVFPPVSNLDPEIygpQHSALTEDhiighldgLSVQQA 479
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768278 132 VQEGNIFIVDYE-----LLDGI---DANKTDPCTHQFLAAPICLLYknlankivPIAIQLNQTPG-----EKNPIFLPTD 198
Cdd:PLN02264  480 LEENRLFMVDYHdiylpFLDRInalDGRKAYATRTIFFLTRLGTLK--------PIAIELSLPPSgpnsrSKRVVTPPVD 551
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768278 199 SKYDWL--LAKIWVRSSDFHIHQTITHLLRTHLVSEVFGIAMYRQLPAVHPLFKLLVAHVRFTIAINTKAREQLICEYGL 276
Cdd:PLN02264  552 ATSNWMwqLAKAHVCSNDAGVHQLVNHWLRTHACLEPFILAAHRQLSAMHPIFKLLDPHMRYTLEINALARQTLISADGV 631
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768278 277 FDKAnATGGGGHVQMVQRAVQ------------DLTYSSLCFPEAIKARGMD-NTEDIPyyfYRDDGLLVWEAIQSFTTE 343
Cdd:PLN02264  632 IESC-FTAGQYGMEISAAAYKnswrfdmeglpaDLIRRGMAVPDPTQPHGLKlLIEDYP---YANDGLLLWSAIQTWVRT 707
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768278 344 VVSIYYEDDQVVEEDQELQD-FVKDVYVYGMRGRKASGFPKsIKSREKLSEYLTVVIFTASAQHAAVNFGQYDWCSWIPN 422
Cdd:PLN02264  708 YVERYYPDPSLICTDKELQAwYSESINVGHADLRDADWWPK-LSTVDDLVSILTTLIWLASAQHAALNFGQYPYGGYVPN 786
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768278 423 APPTMRAPPPTAKGVVTIEQIVD-------TLPDRGRSCWHLGAVWALSQFQENELFLG--MYPEEHFIEKPVKEAMIRF 493
Cdd:PLN02264  787 RPPLMRRLIPDESDPEYASFLADpqkyyfsSMPSLLQTTKFMAVVDTLSTHSPDEEYIGerQQPSIWTGDAEIVEAFYGF 866
                         570       580       590       600       610
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1958768278 494 RKNLEAIVSVIAERNKNKK---------LPYYYLSPDR--------IPNSVAI 529
Cdd:PLN02264  867 SAEIGRIEKEIEKRNADPSrrnrcgagvLPYELLAPSSepgvtcrgVPNSVSI 919
PLN02305 PLN02305
lipoxygenase
82-529 8.69e-55

lipoxygenase


Pssm-ID: 215174 [Multi-domain]  Cd Length: 918  Bit Score: 198.22  E-value: 8.69e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768278  82 WQEDLMFGYQFLNGCNPVLIKRCTELP--KKL------PVTTEMVECSLERQL---SLEQEVQEGNIFIVDYE--LLDGI 148
Cdd:PLN02305  417 WLRDNEFARQALAGVNPVNIEILKEFPilSKLdpavygPPESALTEELIERELegmTVEKAIEEKRLFILDYHdmLLPFI 496
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768278 149 DANKTDPCTHQFlaAPICLLYKNLANKIVPIAIQLN-----QTPGEKNPIFLPTDSKYDWL--LAKIWVRSSDFHIHQTI 221
Cdd:PLN02305  497 EKMNSLPERKAY--ASRTVFFYSKAGALRPIAIELSlpptpSSPGNKFVYTHGHDATTHWIwkLAKAHVCSNDAGVHQLV 574
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768278 222 THLLRTHLVSEVFGIAMYRQLPAVHPLFKLLVAHVRFTIAINTKAREQLICEYGLFDkANATGGGGHVQMVQRAVQDL-T 300
Cdd:PLN02305  575 NHWLRTHACMEPYIIATHRQLSAMHPIYKLLHPHMRYTLEINALARQSLINGGGIIE-ACFSPGKYAMELSSAAYKSMwR 653
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768278 301 YSSLCFPEAIKARGMdNTED----------IPYYFYRDDGLLVWEAIQSFTTEVVSIYYEDDQVVEEDQELQDFVKDVYV 370
Cdd:PLN02305  654 FDMEALPADLIRRGM-AEEDpsmpcgvrlvIEDYPYAADGLLIWSAIKEWVESYVDHFYSEPNSITSDLELQAWWDEIKN 732
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768278 371 YGMRGRKASGFPKSIKSREKLSEYLTVVIFTASAQHAAVNFGQYDWCSWIPNAPPTMRA------PPPTAKGVVTIEQ-I 443
Cdd:PLN02305  733 KGHYDKRNEPWWPKLNTKEDLSGILTTMIWIASGQHAAINFGQYPFGGYVPNRPTLMRKlipqenDPDYEKFIRNPQYtF 812
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768278 444 VDTLPDRGRSCWHLGAVWALSQFQENELFLGMYPE--EHFIEKP-VKEAMIRFRKNLEAIVSVIAERNKNKKL------- 513
Cdd:PLN02305  813 LSSLPTQLQATKVMAVQDTLSTHSPDEEYLGELRHlhSHWINDHeVVKLFNKFSARLEEIEKTINERNKDIRLknrngag 892
                         490       500
                  ....*....|....*....|....*.
gi 1958768278 514 --PYYYLSPDR--------IPNSVAI 529
Cdd:PLN02305  893 ipPYELLLPTSgpgvtgrgIPNSISI 918
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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