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importin subunit alpha-4 isoform X2 [Rattus norvegicus]
armadillo/beta-catenin-like repeat-containing protein( domain architecture ID 1000979)
armadillo/beta-catenin-like repeat-containing protein similar to Saccharomyces cerevisiae vacuolar protein 8 that functions in both vacuole inheritance and protein targeting from the cytoplasm to vacuole
List of domain hits
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Name | Accession | Description | Interval | E-value | ||||||||
SRP1 super family | cl34886 | Karyopherin (importin) alpha [Intracellular trafficking and secretion]; |
1-497 | 1.54e-178 | ||||||||
Karyopherin (importin) alpha [Intracellular trafficking and secretion]; The actual alignment was detected with superfamily member COG5064: Pssm-ID: 227396 [Multi-domain] Cd Length: 526 Bit Score: 511.36 E-value: 1.54e-178
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Name | Accession | Description | Interval | E-value | ||||||||
SRP1 | COG5064 | Karyopherin (importin) alpha [Intracellular trafficking and secretion]; |
1-497 | 1.54e-178 | ||||||||
Karyopherin (importin) alpha [Intracellular trafficking and secretion]; Pssm-ID: 227396 [Multi-domain] Cd Length: 526 Bit Score: 511.36 E-value: 1.54e-178
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IBB | pfam01749 | Importin beta binding domain; This family consists of the importin alpha (karyopherin alpha), ... |
1-69 | 1.16e-21 | ||||||||
Importin beta binding domain; This family consists of the importin alpha (karyopherin alpha), importin beta (karyopherin beta) binding domain. The domain mediates formation of the importin alpha beta complex; required for classical NLS import of proteins into the nucleus, through the nuclear pore complex and across the nuclear envelope. Also in the alignment is the NLS of importin alpha which overlaps with the IBB domain. Pssm-ID: 460311 [Multi-domain] Cd Length: 79 Bit Score: 88.75 E-value: 1.16e-21
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ARM | smart00185 | Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ... |
250-288 | 1.19e-08 | ||||||||
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin. Pssm-ID: 214547 [Multi-domain] Cd Length: 41 Bit Score: 50.89 E-value: 1.19e-08
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PLN03200 | PLN03200 | cellulose synthase-interactive protein; Provisional |
48-162 | 1.53e-04 | ||||||||
cellulose synthase-interactive protein; Provisional Pssm-ID: 215629 [Multi-domain] Cd Length: 2102 Bit Score: 44.71 E-value: 1.53e-04
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Name | Accession | Description | Interval | E-value | ||||||||
SRP1 | COG5064 | Karyopherin (importin) alpha [Intracellular trafficking and secretion]; |
1-497 | 1.54e-178 | ||||||||
Karyopherin (importin) alpha [Intracellular trafficking and secretion]; Pssm-ID: 227396 [Multi-domain] Cd Length: 526 Bit Score: 511.36 E-value: 1.54e-178
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IBB | pfam01749 | Importin beta binding domain; This family consists of the importin alpha (karyopherin alpha), ... |
1-69 | 1.16e-21 | ||||||||
Importin beta binding domain; This family consists of the importin alpha (karyopherin alpha), importin beta (karyopherin beta) binding domain. The domain mediates formation of the importin alpha beta complex; required for classical NLS import of proteins into the nucleus, through the nuclear pore complex and across the nuclear envelope. Also in the alignment is the NLS of importin alpha which overlaps with the IBB domain. Pssm-ID: 460311 [Multi-domain] Cd Length: 79 Bit Score: 88.75 E-value: 1.16e-21
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Arm_3 | pfam16186 | Atypical Arm repeat; This atypical Arm repeat appears at the very C-terminus of eukaryotic ... |
429-475 | 3.30e-21 | ||||||||
Atypical Arm repeat; This atypical Arm repeat appears at the very C-terminus of eukaryotic proteins such as importin subunit alpha-2, as the last of the repeating units. Pssm-ID: 465050 [Multi-domain] Cd Length: 49 Bit Score: 86.49 E-value: 3.30e-21
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Arm | pfam00514 | Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ... |
122-160 | 3.80e-10 | ||||||||
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats. Pssm-ID: 425727 [Multi-domain] Cd Length: 41 Bit Score: 54.77 E-value: 3.80e-10
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HEAT_EZ | pfam13513 | HEAT-like repeat; The HEAT repeat family is related to armadillo/beta-catenin-like repeats ... |
105-160 | 2.30e-09 | ||||||||
HEAT-like repeat; The HEAT repeat family is related to armadillo/beta-catenin-like repeats (see pfam00514). These EZ repeats are found in subunits of cyanobacterial phycocyanin lyase and other proteins and probably carry out a scaffolding role. Pssm-ID: 463906 [Multi-domain] Cd Length: 55 Bit Score: 53.14 E-value: 2.30e-09
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Arm | pfam00514 | Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ... |
250-289 | 5.23e-09 | ||||||||
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats. Pssm-ID: 425727 [Multi-domain] Cd Length: 41 Bit Score: 51.69 E-value: 5.23e-09
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Arm | pfam00514 | Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ... |
333-372 | 5.76e-09 | ||||||||
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats. Pssm-ID: 425727 [Multi-domain] Cd Length: 41 Bit Score: 51.69 E-value: 5.76e-09
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ARM | smart00185 | Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ... |
250-288 | 1.19e-08 | ||||||||
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin. Pssm-ID: 214547 [Multi-domain] Cd Length: 41 Bit Score: 50.89 E-value: 1.19e-08
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ARM | smart00185 | Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ... |
122-160 | 1.67e-08 | ||||||||
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin. Pssm-ID: 214547 [Multi-domain] Cd Length: 41 Bit Score: 50.12 E-value: 1.67e-08
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Arm | pfam00514 | Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ... |
80-120 | 2.60e-08 | ||||||||
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats. Pssm-ID: 425727 [Multi-domain] Cd Length: 41 Bit Score: 49.76 E-value: 2.60e-08
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HEAT | COG1413 | HEAT repeat [General function prediction only]; |
48-160 | 3.70e-08 | ||||||||
HEAT repeat [General function prediction only]; Pssm-ID: 441023 [Multi-domain] Cd Length: 137 Bit Score: 52.32 E-value: 3.70e-08
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ARM | smart00185 | Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ... |
79-120 | 1.10e-07 | ||||||||
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin. Pssm-ID: 214547 [Multi-domain] Cd Length: 41 Bit Score: 47.81 E-value: 1.10e-07
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HEAT | COG1413 | HEAT repeat [General function prediction only]; |
92-287 | 2.14e-07 | ||||||||
HEAT repeat [General function prediction only]; Pssm-ID: 441023 [Multi-domain] Cd Length: 137 Bit Score: 50.01 E-value: 2.14e-07
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Arm | pfam00514 | Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ... |
291-331 | 2.60e-07 | ||||||||
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats. Pssm-ID: 425727 [Multi-domain] Cd Length: 41 Bit Score: 47.06 E-value: 2.60e-07
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HEAT_2 | pfam13646 | HEAT repeats; This family includes multiple HEAT repeats. |
92-160 | 3.08e-07 | ||||||||
HEAT repeats; This family includes multiple HEAT repeats. Pssm-ID: 433376 [Multi-domain] Cd Length: 88 Bit Score: 48.10 E-value: 3.08e-07
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ARM | smart00185 | Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ... |
291-331 | 9.56e-07 | ||||||||
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin. Pssm-ID: 214547 [Multi-domain] Cd Length: 41 Bit Score: 45.50 E-value: 9.56e-07
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ARM | smart00185 | Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ... |
333-372 | 1.77e-06 | ||||||||
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin. Pssm-ID: 214547 [Multi-domain] Cd Length: 41 Bit Score: 44.73 E-value: 1.77e-06
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Arm | pfam00514 | Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ... |
378-414 | 6.79e-05 | ||||||||
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats. Pssm-ID: 425727 [Multi-domain] Cd Length: 41 Bit Score: 40.13 E-value: 6.79e-05
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PLN03200 | PLN03200 | cellulose synthase-interactive protein; Provisional |
48-162 | 1.53e-04 | ||||||||
cellulose synthase-interactive protein; Provisional Pssm-ID: 215629 [Multi-domain] Cd Length: 2102 Bit Score: 44.71 E-value: 1.53e-04
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Adaptin_N | pfam01602 | Adaptin N terminal region; This family consists of the N terminal region of various alpha, ... |
51-475 | 2.23e-04 | ||||||||
Adaptin N terminal region; This family consists of the N terminal region of various alpha, beta and gamma subunits of the AP-1, AP-2 and AP-3 adaptor protein complexes. The adaptor protein (AP) complexes are involved in the formation of clathrin-coated pits and vesicles. The N-terminal region of the various adaptor proteins (APs) is constant by comparison to the C-terminal which is variable within members of the AP-2 family; and it has been proposed that this constant region interacts with another uniform component of the coated vesicles. Pssm-ID: 396262 [Multi-domain] Cd Length: 523 Bit Score: 43.76 E-value: 2.23e-04
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Arm | pfam00514 | Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ... |
208-247 | 8.59e-04 | ||||||||
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats. Pssm-ID: 425727 [Multi-domain] Cd Length: 41 Bit Score: 37.05 E-value: 8.59e-04
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ARM | smart00185 | Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ... |
378-414 | 1.40e-03 | ||||||||
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin. Pssm-ID: 214547 [Multi-domain] Cd Length: 41 Bit Score: 36.25 E-value: 1.40e-03
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HEAT_2 | pfam13646 | HEAT repeats; This family includes multiple HEAT repeats. |
49-158 | 3.13e-03 | ||||||||
HEAT repeats; This family includes multiple HEAT repeats. Pssm-ID: 433376 [Multi-domain] Cd Length: 88 Bit Score: 36.93 E-value: 3.13e-03
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Arm | pfam00514 | Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ... |
165-205 | 5.64e-03 | ||||||||
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats. Pssm-ID: 425727 [Multi-domain] Cd Length: 41 Bit Score: 34.74 E-value: 5.64e-03
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HEAT_EZ | pfam13513 | HEAT-like repeat; The HEAT repeat family is related to armadillo/beta-catenin-like repeats ... |
239-287 | 6.02e-03 | ||||||||
HEAT-like repeat; The HEAT repeat family is related to armadillo/beta-catenin-like repeats (see pfam00514). These EZ repeats are found in subunits of cyanobacterial phycocyanin lyase and other proteins and probably carry out a scaffolding role. Pssm-ID: 463906 [Multi-domain] Cd Length: 55 Bit Score: 35.04 E-value: 6.02e-03
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Blast search parameters | ||||
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