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Conserved domains on  [gi|1958647511|ref|XP_038938750|]
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centriolar coiled-coil protein of 110 kDa isoform X3 [Rattus norvegicus]

Protein Classification

CaM_bind domain-containing protein( domain architecture ID 11240370)

CaM_bind domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CaM_bind pfam16025
Calcium-dependent calmodulin binding; This domain is found at the N-terminus of centriolar ...
 29-106 2.56e-20

Calcium-dependent calmodulin binding; This domain is found at the N-terminus of centriolar coiled-coil protein of 110 kDa (CCP110), where it binds calmodulin. Binding of calmodulin to this domain is calcium dependent.


:

Pssm-ID: 464981  Cd Length: 78  Bit Score: 85.85  E-value: 2.56e-20
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1958647511  29 QAESVSLIRFHGVAVLSPLLTIEKREKIQQEKQKALDVQTRKQANRKKALLTRVQEILENVQVRKAPNASDFDQWATE 106
Cdd:pfam16025   1 ESEFVSCIKINGVPILPPLMTDEKREEMQQYRQKAIAIEERLRKQRKAALLIRVQEILKNEQRRKLPTLEQTSTLDAE 78
 
Name Accession Description Interval E-value
CaM_bind pfam16025
Calcium-dependent calmodulin binding; This domain is found at the N-terminus of centriolar ...
 29-106 2.56e-20

Calcium-dependent calmodulin binding; This domain is found at the N-terminus of centriolar coiled-coil protein of 110 kDa (CCP110), where it binds calmodulin. Binding of calmodulin to this domain is calcium dependent.


Pssm-ID: 464981  Cd Length: 78  Bit Score: 85.85  E-value: 2.56e-20
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1958647511  29 QAESVSLIRFHGVAVLSPLLTIEKREKIQQEKQKALDVQTRKQANRKKALLTRVQEILENVQVRKAPNASDFDQWATE 106
Cdd:pfam16025   1 ESEFVSCIKINGVPILPPLMTDEKREEMQQYRQKAIAIEERLRKQRKAALLIRVQEILKNEQRRKLPTLEQTSTLDAE 78
 
Name Accession Description Interval E-value
CaM_bind pfam16025
Calcium-dependent calmodulin binding; This domain is found at the N-terminus of centriolar ...
 29-106 2.56e-20

Calcium-dependent calmodulin binding; This domain is found at the N-terminus of centriolar coiled-coil protein of 110 kDa (CCP110), where it binds calmodulin. Binding of calmodulin to this domain is calcium dependent.


Pssm-ID: 464981  Cd Length: 78  Bit Score: 85.85  E-value: 2.56e-20
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1958647511  29 QAESVSLIRFHGVAVLSPLLTIEKREKIQQEKQKALDVQTRKQANRKKALLTRVQEILENVQVRKAPNASDFDQWATE 106
Cdd:pfam16025   1 ESEFVSCIKINGVPILPPLMTDEKREEMQQYRQKAIAIEERLRKQRKAALLIRVQEILKNEQRRKLPTLEQTSTLDAE 78
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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